RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W OST1P41543 476 aaKnown RBP3.07□□□□□ -1.92
MSD1YPL104W EGT2P42835 1041 aa3.07□□□□□ -1.92
MSD1YPL104W TAD2P47058 250 aa3.07□□□□□ -1.92
MSD1YPL104W PNC1P53184 216 aaKnown RBP3.07□□□□□ -1.92
MSD1YPL104W TIM44Q01852 431 aa3.07□□□□□ -1.92
MSD1YPL104W YDL218WQ07629 317 aa3.07□□□□□ -1.92
MSD1YPL104W RRS1Q08746 203 aaKnown RBP3.07□□□□□ -1.92
MSD1YPL104W YCT1Q12235 531 aa3.07□□□□□ -1.92
MSD1YPL104W ATP14Q12349 124 aa3.07□□□□□ -1.92
MSD1YPL104W EAF3Q12432 401 aa3.07□□□□□ -1.92
MSD1YPL104W MSI1P13712 422 aa3.07□□□□□ -1.92
MSD1YPL104W LSM12P38828 187 aaKnown RBP3.07□□□□□ -1.92
MSD1YPL104W PCL7P40186 285 aa3.07□□□□□ -1.92
MSD1YPL104W RPL13BP40212 199 aaKnown RBP3.07□□□□□ -1.92
MSD1YPL104W RPA34P47006 233 aaPredicted RBP3.07□□□□□ -1.92
MSD1YPL104W SOL1P50278 321 aa3.07□□□□□ -1.92
MSD1YPL104W YIP5P53108 310 aa3.07□□□□□ -1.92
MSD1YPL104W SUR7P54003 302 aa3.07□□□□□ -1.92
MSD1YPL104W YDC1Q02896 317 aa3.07□□□□□ -1.92
MSD1YPL104W YMR254CQ04838 102 aa3.07□□□□□ -1.92
MSD1YPL104W UPS1Q05776 175 aa3.07□□□□□ -1.92
MSD1YPL104W YLR108CQ12259 485 aa3.07□□□□□ -1.92
MSD1YPL104W MPD1Q12404 318 aaKnown RBP3.07□□□□□ -1.92
MSD1YPL104W RPL13AQ12690 199 aaPredicted RBP3.07□□□□□ -1.92
MSD1YPL104W YLR365WQ7LIF2 110 aa3.07□□□□□ -1.92
MSD1YPL104W ATG40Q99325 256 aa3.07□□□□□ -1.92
MSD1YPL104W SSA3P09435 649 aaKnown RBP3.06□□□□□ -1.92
MSD1YPL104W IMP1P28627 190 aa3.06□□□□□ -1.92
MSD1YPL104W EMP24P32803 203 aaKnown RBP3.06□□□□□ -1.92
MSD1YPL104W RPB7P34087 171 aa3.06□□□□□ -1.92
MSD1YPL104W SRY1P36007 326 aa3.06□□□□□ -1.92
MSD1YPL104W SWD2P36104 329 aaPredicted RBP3.06□□□□□ -1.92
MSD1YPL104W DAD2P36162 133 aa3.06□□□□□ -1.92
MSD1YPL104W ADH5P38113 351 aaKnown RBP3.06□□□□□ -1.92
MSD1YPL104W ASP1P38986 381 aaPredicted RBP3.06□□□□□ -1.92
MSD1YPL104W SEN34P39707 275 aa3.06□□□□□ -1.92
MSD1YPL104W SSO2P39926 295 aa3.06□□□□□ -1.92
MSD1YPL104W GLR1P41921 483 aaKnown RBP3.06□□□□□ -1.92
MSD1YPL104W UBC13P52490 153 aa3.06□□□□□ -1.92
MSD1YPL104W YGL117WP53133 265 aa3.06□□□□□ -1.92
MSD1YPL104W PKP2P53170 491 aa3.06□□□□□ -1.92
MSD1YPL104W SLX9P53251 210 aaPredicted RBP3.06□□□□□ -1.92
MSD1YPL104W YPL067CQ02754 198 aa3.06□□□□□ -1.92
MSD1YPL104W VPS28Q02767 242 aa3.06□□□□□ -1.92
MSD1YPL104W RRT7Q07829 113 aa3.06□□□□□ -1.92
MSD1YPL104W PML1Q07930 204 aaPredicted RBP3.06□□□□□ -1.92
MSD1YPL104W FCF2Q12035 217 aaPredicted RBP3.06□□□□□ -1.92
MSD1YPL104W RNH203Q12338 110 aa3.06□□□□□ -1.92
MSD1YPL104W YLR146W-AQ2V2P1 62 aa3.06□□□□□ -1.92
MSD1YPL104W UBI4P0CG63 381 aaKnown RBP3.05□□□□□ -1.92
MSD1YPL104W FUS3P16892 353 aaKnown RBP3.05□□□□□ -1.92
MSD1YPL104W MNS1P32906 549 aa3.05□□□□□ -1.92
MSD1YPL104W ERV15P38312 142 aa3.05□□□□□ -1.92
MSD1YPL104W PRM5P40476 318 aa3.05□□□□□ -1.92
MSD1YPL104W YHC3P47040 408 aa3.05□□□□□ -1.92
MSD1YPL104W GPI15P53961 229 aa3.05□□□□□ -1.92
MSD1YPL104W YPL077CQ02831 240 aa3.05□□□□□ -1.92
MSD1YPL104W TSA2Q04120 196 aa3.05□□□□□ -1.92
MSD1YPL104W API2Q04413 109 aa3.05□□□□□ -1.92
MSD1YPL104W ERP1Q05359 219 aaKnown RBP3.05□□□□□ -1.92
MSD1YPL104W YOL029CQ08187 201 aa3.05□□□□□ -1.92
MSD1YPL104W YPR108W-AQ3E7B3 70 aa3.05□□□□□ -1.92
MSD1YPL104W RPS23AP0CX29 145 aaKnown RBP3.05□□□□□ -1.92
MSD1YPL104W RPS23BP0CX30 145 aa3.05□□□□□ -1.92
MSD1YPL104W MAK32P23060 363 aa3.05□□□□□ -1.92
MSD1YPL104W ERG2P32352 222 aa3.05□□□□□ -1.92
MSD1YPL104W SWD3P38123 315 aa3.05□□□□□ -1.92
MSD1YPL104W ICS2P38284 255 aa3.05□□□□□ -1.92
MSD1YPL104W NTC20P38302 140 aaPredicted RBP3.05□□□□□ -1.92
MSD1YPL104W WSS1P38838 269 aa3.05□□□□□ -1.92
MSD1YPL104W UIP3P39547 235 aa3.05□□□□□ -1.92
MSD1YPL104W PAC2P39937 518 aa3.05□□□□□ -1.92
MSD1YPL104W YFL051CP43552 160 aa3.05□□□□□ -1.92
MSD1YPL104W PHO23P50947 330 aa3.05□□□□□ -1.92
MSD1YPL104W EST3Q03096 181 aa3.05□□□□□ -1.92
MSD1YPL104W CAC2Q04199 468 aa3.05□□□□□ -1.92
MSD1YPL104W BER1Q06688 274 aaKnown RBP3.05□□□□□ -1.92
MSD1YPL104W FRE8Q12209 686 aa3.05□□□□□ -1.92
MSD1YPL104W YUH1P35127 236 aa3.04□□□□□ -1.92
MSD1YPL104W GPI16P38875 610 aa3.04□□□□□ -1.92
MSD1YPL104W YEA6P39953 335 aa3.04□□□□□ -1.92
MSD1YPL104W AGX1P43567 385 aa3.04□□□□□ -1.92
MSD1YPL104W YMR279CQ03263 540 aa3.04□□□□□ -1.92
MSD1YPL104W FIT1Q04433 528 aa3.04□□□□□ -1.92
MSD1YPL104W PRP11Q07350 266 aaPredicted RBP3.04□□□□□ -1.92
MSD1YPL104W FCY22Q12119 530 aa3.04□□□□□ -1.92
MSD1YPL104W YOR192C-CQ3E736 78 aa3.04□□□□□ -1.92
MSD1YPL104W HUG1Q6Q5K6 68 aa3.04□□□□□ -1.92
MSD1YPL104W GCN1P33892 2672 aaKnown RBP3.04□□□□□ -1.92
MSD1YPL104W ZRC1P20107 442 aa3.03□□□□□ -1.92
MSD1YPL104W RPI1P23250 407 aaKnown RBP3.03□□□□□ -1.92
MSD1YPL104W ECM25P32525 599 aa3.03□□□□□ -1.92
MSD1YPL104W YBR220CP38318 560 aa3.03□□□□□ -1.92
MSD1YPL104W YHL037CP38733 133 aa3.03□□□□□ -1.92
MSD1YPL104W SLM1P40485 686 aa3.03□□□□□ -1.92
MSD1YPL104W YGR149WP48236 432 aa3.03□□□□□ -1.92
MSD1YPL104W MSO1P53604 210 aaKnown RBP3.03□□□□□ -1.92
MSD1YPL104W YIF1P53845 314 aaKnown RBP3.03□□□□□ -1.92
MSD1YPL104W RIM9Q04734 239 aa3.03□□□□□ -1.92
MSD1YPL104W YOL118CQ08259 102 aa3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 54.5 ms