RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C TRR2P38816 342 aa2.84□□□□□ -1.95
YIR040CYIR040C SPL2P38839 148 aa2.84□□□□□ -1.95
YIR040CYIR040C HMF1P40037 129 aaKnown RBP2.84□□□□□ -1.95
YIR040CYIR040C YPL073CP40323 161 aa2.84□□□□□ -1.95
YIR040CYIR040C YIL060WP40519 144 aa2.84□□□□□ -1.95
YIR040CYIR040C YIL059CP40520 121 aa2.84□□□□□ -1.95
YIR040CYIR040C YIA6P40556 373 aa2.84□□□□□ -1.95
YIR040CYIR040C YFR045WP43617 309 aa2.84□□□□□ -1.95
YIR040CYIR040C MSY1P48527 492 aa2.84□□□□□ -1.95
YIR040CYIR040C SDT1P53078 280 aa2.84□□□□□ -1.95
YIR040CYIR040C MPC1P53157 130 aaKnown RBP2.84□□□□□ -1.95
YIR040CYIR040C SYF2P53277 215 aaPredicted RBP2.84□□□□□ -1.95
YIR040CYIR040C YGR164WP53291 111 aa2.84□□□□□ -1.95
YIR040CYIR040C FMP41P53889 259 aaKnown RBP2.84□□□□□ -1.95
YIR040CYIR040C APJ1P53940 528 aa2.84□□□□□ -1.95
YIR040CYIR040C COQ10Q08058 207 aa2.84□□□□□ -1.95
YIR040CYIR040C MCT1Q12283 360 aa2.84□□□□□ -1.95
YIR040CYIR040C Q0010Q9ZZX9 128 aa2.84□□□□□ -1.95
YIR040CYIR040C POL1P13382 1468 aa2.84□□□□□ -1.96
YIR040CYIR040C SWR1Q05471 1514 aa2.83□□□□□ -1.96
YIR040CYIR040C GDB1Q06625 1536 aa2.83□□□□□ -1.96
YIR040CYIR040C FMP49A0A023PZB3 126 aa2.83□□□□□ -1.96
YIR040CYIR040C COX5AP00424 153 aa2.83□□□□□ -1.96
YIR040CYIR040C ADH3P07246 375 aaKnown RBP2.83□□□□□ -1.96
YIR040CYIR040C PEP4P07267 405 aaKnown RBP2.83□□□□□ -1.96
YIR040CYIR040C PRE2P30656 287 aaKnown RBP2.83□□□□□ -1.96
YIR040CYIR040C ZRT1P32804 376 aa2.83□□□□□ -1.96
YIR040CYIR040C MRPL6P32904 214 aa2.83□□□□□ -1.96
YIR040CYIR040C ARC40P38328 384 aaKnown RBP2.83□□□□□ -1.96
YIR040CYIR040C INM1P38710 295 aa2.83□□□□□ -1.96
YIR040CYIR040C BAT1P38891 393 aaKnown RBP2.83□□□□□ -1.96
YIR040CYIR040C RPB11P38902 120 aa2.83□□□□□ -1.96
YIR040CYIR040C PEX22P39718 180 aa2.83□□□□□ -1.96
YIR040CYIR040C MSL1P40567 111 aaPredicted RBP2.83□□□□□ -1.96
YIR040CYIR040C SNM1P40993 198 aa2.83□□□□□ -1.96
YIR040CYIR040C SYS1P41544 203 aa2.83□□□□□ -1.96
YIR040CYIR040C LCB3P47013 409 aa2.83□□□□□ -1.96
YIR040CYIR040C GEP7P53171 287 aa2.83□□□□□ -1.96
YIR040CYIR040C THG1P53215 237 aaKnown RBP2.83□□□□□ -1.96
YIR040CYIR040C ATP23P53722 227 aa2.83□□□□□ -1.96
YIR040CYIR040C PGA1P53896 198 aa2.83□□□□□ -1.96
YIR040CYIR040C CDC14Q00684 551 aa2.83□□□□□ -1.96
YIR040CYIR040C MRPS16Q02608 121 aa2.83□□□□□ -1.96
YIR040CYIR040C UPS3Q04006 179 aa2.83□□□□□ -1.96
YIR040CYIR040C FIT1Q04433 528 aa2.83□□□□□ -1.96
YIR040CYIR040C SEC13Q04491 297 aaKnown RBP2.83□□□□□ -1.96
YIR040CYIR040C YMR317WQ04893 1140 aa2.83□□□□□ -1.96
YIR040CYIR040C SHH4Q06236 168 aa2.83□□□□□ -1.96
YIR040CYIR040C KEI1Q06346 221 aa2.83□□□□□ -1.96
YIR040CYIR040C PIN3Q06449 215 aa2.83□□□□□ -1.96
YIR040CYIR040C PAU23Q07987 124 aa2.83□□□□□ -1.96
YIR040CYIR040C YLR049CQ12110 428 aa2.83□□□□□ -1.96
YIR040CYIR040C PAU17Q12370 124 aa2.83□□□□□ -1.96
YIR040CYIR040C AIM45Q12480 344 aaKnown RBP2.83□□□□□ -1.96
YIR040CYIR040C HUT1Q12520 339 aa2.83□□□□□ -1.96
YIR040CYIR040C YLR111WQ12528 110 aa2.83□□□□□ -1.96
YIR040CYIR040C RPL22AP05749 121 aaKnown RBP2.82□□□□□ -1.96
YIR040CYIR040C ADK1P07170 222 aaKnown RBP2.82□□□□□ -1.96
YIR040CYIR040C MRS1P07266 363 aa2.82□□□□□ -1.96
YIR040CYIR040C YOL163WP0CF20 169 aa2.82□□□□□ -1.96
YIR040CYIR040C RPL2AP0CX45 254 aaKnown RBP2.82□□□□□ -1.96
YIR040CYIR040C RPL2BP0CX46 254 aaKnown RBP2.82□□□□□ -1.96
YIR040CYIR040C RPL12AP0CX53 165 aaKnown RBP2.82□□□□□ -1.96
YIR040CYIR040C RPL12BP0CX54 165 aa2.82□□□□□ -1.96
YIR040CYIR040C SNF4P12904 322 aa2.82□□□□□ -1.96
YIR040CYIR040C MSI1P13712 422 aa2.82□□□□□ -1.96
YIR040CYIR040C RPB3P16370 318 aaKnown RBP2.82□□□□□ -1.96
YIR040CYIR040C ARF2P19146 181 aaKnown RBP2.82□□□□□ -1.96
YIR040CYIR040C MXR2P25566 168 aa2.82□□□□□ -1.96
YIR040CYIR040C TIP1P27654 210 aaPredicted RBP2.82□□□□□ -1.96
YIR040CYIR040C SFK1P35735 353 aa2.82□□□□□ -1.96
YIR040CYIR040C EGT2P42835 1041 aa2.82□□□□□ -1.96
YIR040CYIR040C YFR020WP43600 232 aa2.82□□□□□ -1.96
YIR040CYIR040C YFR054CP43622 192 aa2.82□□□□□ -1.96
YIR040CYIR040C GPI2P46961 280 aa2.82□□□□□ -1.96
YIR040CYIR040C YNR048WP53740 393 aa2.82□□□□□ -1.96
YIR040CYIR040C WSC2P53832 503 aa2.82□□□□□ -1.96
YIR040CYIR040C YNL033WP53964 284 aa2.82□□□□□ -1.96
YIR040CYIR040C CRZ1P53968 678 aa2.82□□□□□ -1.96
YIR040CYIR040C YNL019CP53975 284 aa2.82□□□□□ -1.96
YIR040CYIR040C HSK3P69852 69 aa2.82□□□□□ -1.96
YIR040CYIR040C IRC15Q02733 499 aa2.82□□□□□ -1.96
YIR040CYIR040C YDR415CQ04033 374 aaPredicted RBP2.82□□□□□ -1.96
YIR040CYIR040C VBA1Q04301 562 aa2.82□□□□□ -1.96
YIR040CYIR040C YMR090WQ04304 227 aaKnown RBP2.82□□□□□ -1.96
YIR040CYIR040C SCW10Q04951 389 aa2.82□□□□□ -1.96
YIR040CYIR040C ECI1Q05871 280 aa2.82□□□□□ -1.96
YIR040CYIR040C YOR376WQ08900 122 aa2.82□□□□□ -1.96
YIR040CYIR040C PRS5Q12265 496 aaKnown RBP2.82□□□□□ -1.96
YIR040CYIR040C SME1Q12330 94 aaPredicted RBP2.82□□□□□ -1.96
YIR040CYIR040C MED11Q99278 115 aa2.82□□□□□ -1.96
YIR040CYIR040C HIR3P47171 1648 aa2.82□□□□□ -1.96
YIR040CYIR040C TY2B-LR1P0C2J3 1770 aa2.82□□□□□ -1.96
YIR040CYIR040C TY2B-FP0CX63 1770 aa2.82□□□□□ -1.96
YIR040CYIR040C TY2B-GR2P0CX64 1770 aa2.82□□□□□ -1.96
YIR040CYIR040C TY2B-CP25384 1770 aa2.82□□□□□ -1.96
YIR040CYIR040C TY2B-DR2Q03494 1770 aa2.82□□□□□ -1.96
YIR040CYIR040C TY1B-DR1Q03855 1755 aa2.82□□□□□ -1.96
YIR040CYIR040C TY2B-DR3Q07791 1770 aaKnown RBP2.82□□□□□ -1.96
YIR040CYIR040C TY2B-OR1Q12113 1770 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms