RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAN1	YIR006C	PHD1	P36093	366 aa		4.15	□□□□□ -1.75
PAN1	YIR006C	YBR197C	P38306	217 aa		4.15	□□□□□ -1.75
PAN1	YIR006C	HNT2	P49775	206 aa		4.15	□□□□□ -1.75
PAN1	YIR006C	BLM10	P43583	2143 aa		4.15	□□□□□ -1.75
PAN1	YIR006C	APA2	P22108	325 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	QCR9	P22289	66 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	MRPS9	P38120	278 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	YND1	P40009	630 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	DMA2	P53924	522 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	YPR147C	Q06522	304 aa	Known RBP	4.14	□□□□□ -1.75
PAN1	YIR006C	YDL086W	Q07505	273 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	CSI2	Q08054	341 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	YPR014C	Q6B0W2	109 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	HTL1	Q9URQ5	78 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	COX5B	P00425	151 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	DER1	P38307	211 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	RPF1	P38805	295 aa	Known RBP	4.14	□□□□□ -1.75
PAN1	YIR006C	ATF1	P40353	525 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	YDL242W	Q07746	117 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	YHR214C-E	Q8TGK0	99 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	RPL7A	P05737	244 aa	Known RBP	4.14	□□□□□ -1.75
PAN1	YIR006C	CDC50	P25656	391 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	YBR184W	P38299	523 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	RFC2	P40348	353 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	YJR012C	P47087	207 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	YIP5	P53108	310 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
PAN1	YIR006C	YPL108W	Q02872	168 aa	Predicted RBP	4.14	□□□□□ -1.75
PAN1	YIR006C	CUE4	Q04201	117 aa	Predicted RBP	4.14	□□□□□ -1.75
PAN1	YIR006C	SEN15	Q04675	128 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	RRG8	Q06109	277 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	YDL180W	Q12301	547 aa		4.14	□□□□□ -1.75
PAN1	YIR006C	DEG1	P31115	442 aa	Known RBP	4.13	□□□□□ -1.75
PAN1	YIR006C	TDA4	P47153	279 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	RIB4	P50861	169 aa	Predicted RBP	4.13	□□□□□ -1.75
PAN1	YIR006C	MSO1	P53604	210 aa	Known RBP	4.13	□□□□□ -1.75
PAN1	YIR006C	SDH7	Q04401	133 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	YLR050C	Q12155	161 aa	Known RBP	4.13	□□□□□ -1.75
PAN1	YIR006C	WSC4	P38739	605 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	YCK3	P39962	524 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	PAU5	P43575	122 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	BNA2	P47125	453 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	TYW3	P53177	273 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	CTR3	Q06686	241 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	YOR385W	Q08909	290 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	Q0144	Q9ZZW2	109 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	UBR1	P19812	1950 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	HSP150	P32478	413 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	YDC1	Q02896	317 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	ECM18	Q04623	453 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	DAD1	Q12248	94 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	CHO1	P08456	276 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	YGP1	P38616	354 aa	Known RBP	4.13	□□□□□ -1.75
PAN1	YIR006C	YIL169C	P40442	995 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	YPS6	P40583	537 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	THG1	P53215	237 aa	Known RBP	4.13	□□□□□ -1.75
PAN1	YIR006C	ART5	P53244	586 aa	Known RBP	4.13	□□□□□ -1.75
PAN1	YIR006C	HSK3	P69852	69 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	STD1	Q02794	444 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	HLR1	Q04429	423 aa		4.13	□□□□□ -1.75
PAN1	YIR006C	PAR32	Q12515	295 aa	Known RBP	4.13	□□□□□ -1.75
PAN1	YIR006C	RPL9A	P05738	191 aa	Known RBP	4.12	□□□□□ -1.75
PAN1	YIR006C	MRPL27	P36526	146 aa	Predicted RBP	4.12	□□□□□ -1.75
PAN1	YIR006C	YBR096W	P38256	230 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	PRE3	P38624	215 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	SPC25	P40014	221 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	COX15	P40086	486 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	YIL060W	P40519	144 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	MSL1	P40567	111 aa	Predicted RBP	4.12	□□□□□ -1.75
PAN1	YIR006C	YIP4	P53093	235 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	LCL3	P53153	274 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	SSU72	P53538	206 aa	Predicted RBP	4.12	□□□□□ -1.75
PAN1	YIR006C	INN1	P53901	409 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	AVO2	Q04749	426 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	YML053C	Q04978	212 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	FSH2	Q05015	223 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	BSC1	Q12140	328 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	HUT1	Q12520	339 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	YNR034W-A	Q3E841	98 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	NHP6A	P11632	93 aa	Known RBP	4.12	□□□□□ -1.75
PAN1	YIR006C	YUH1	P35127	236 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	OM14	P38325	134 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	SOL3	P38858	249 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	MIC27	P50945	234 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	SDS23	P53172	527 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	MST27	P53176	234 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	SEI1	Q06058	285 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	CNL1	Q06333	122 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	LAA1	P39526	2014 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	SEC4	P07560	215 aa	Known RBP	4.12	□□□□□ -1.75
PAN1	YIR006C	OCH1	P31755	480 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	YPR098C	Q06089	161 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	ARR3	Q06598	404 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	HEM25	Q07534	307 aa		4.12	□□□□□ -1.75
PAN1	YIR006C	RFA1	P22336	621 aa	Known RBP	4.11	□□□□□ -1.75
PAN1	YIR006C	RPS27A	P35997	82 aa	Known RBP	4.11	□□□□□ -1.75
PAN1	YIR006C	RPS27B	P38711	82 aa		4.11	□□□□□ -1.75
PAN1	YIR006C	CFD1	P40558	293 aa		4.11	□□□□□ -1.75
PAN1	YIR006C	CRZ1	P53968	678 aa		4.11	□□□□□ -1.75
PAN1	YIR006C	RCE1	Q03530	315 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms