RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP7YIL156W INP1Q03694 420 aa4.02□□□□□ -1.77
UBP7YIL156W PLP1Q04004 230 aa4.02□□□□□ -1.77
UBP7YIL156W PAL1Q05518 499 aaKnown RBP4.02□□□□□ -1.77
UBP7YIL156W SHH4Q06236 168 aa4.02□□□□□ -1.77
UBP7YIL156W IPP1P00817 287 aaKnown RBP4.02□□□□□ -1.77
UBP7YIL156W CSG2P35206 410 aa4.02□□□□□ -1.77
UBP7YIL156W ASK1P35734 292 aa4.02□□□□□ -1.77
UBP7YIL156W HYR1P40581 163 aaKnown RBP4.02□□□□□ -1.77
UBP7YIL156W IPI1P38803 334 aaPredicted RBP4.01□□□□□ -1.77
UBP7YIL156W AVT6P40074 448 aa4.01□□□□□ -1.77
UBP7YIL156W UFE1P41834 346 aa4.01□□□□□ -1.77
UBP7YIL156W YGR050CP53231 118 aa4.01□□□□□ -1.77
UBP7YIL156W RCF2P53721 224 aa4.01□□□□□ -1.77
UBP7YIL156W PKR1Q03880 122 aaKnown RBP4.01□□□□□ -1.77
UBP7YIL156W HPT1Q04178 221 aaKnown RBP4.01□□□□□ -1.77
UBP7YIL156W PBA1Q05778 276 aa4.01□□□□□ -1.77
UBP7YIL156W YPS3Q12303 508 aa4.01□□□□□ -1.77
UBP7YIL156W BBP1Q12365 385 aa4.01□□□□□ -1.77
UBP7YIL156W CDC7P06243 507 aa4.01□□□□□ -1.77
UBP7YIL156W YHI9P38765 294 aa4.01□□□□□ -1.77
UBP7YIL156W HMF1P40037 129 aaKnown RBP4.01□□□□□ -1.77
UBP7YIL156W YLR179CQ06252 201 aaKnown RBP4.01□□□□□ -1.77
UBP7YIL156W YPR202WQ08993 238 aa4.01□□□□□ -1.77
UBP7YIL156W RMD6P39975 231 aa4□□□□□ -1.77
UBP7YIL156W RRG9P40156 214 aa4□□□□□ -1.77
UBP7YIL156W IRC24P40580 263 aa4□□□□□ -1.77
UBP7YIL156W YGL262WP53054 175 aa4□□□□□ -1.77
UBP7YIL156W SWT21P53873 357 aaPredicted RBP4□□□□□ -1.77
UBP7YIL156W IMP4P53941 290 aaKnown RBP4□□□□□ -1.77
UBP7YIL156W EMI1Q04406 187 aa4□□□□□ -1.77
UBP7YIL156W YPL257WQ08974 193 aa4□□□□□ -1.77
UBP7YIL156W YLR361C-AQ3E795 98 aa4□□□□□ -1.77
UBP7YIL156W YML108WQ03759 105 aa4□□□□□ -1.77
UBP7YIL156W IRC25Q07951 179 aa4□□□□□ -1.77
UBP7YIL156W ATG22P25568 528 aa4□□□□□ -1.77
UBP7YIL156W TRM7P38238 310 aaKnown RBP4□□□□□ -1.77
UBP7YIL156W GGC1P38988 300 aa4□□□□□ -1.77
UBP7YIL156W SCW4P53334 386 aaKnown RBP4□□□□□ -1.77
UBP7YIL156W YLR046CQ12253 270 aa4□□□□□ -1.77
UBP7YIL156W FCY2P17064 533 aa3.99□□□□□ -1.77
UBP7YIL156W TRR2P38816 342 aa3.99□□□□□ -1.77
UBP7YIL156W YDR476CQ03362 224 aa3.99□□□□□ -1.77
UBP7YIL156W TIM22Q12328 207 aa3.99□□□□□ -1.77
UBP7YIL156W DSF1P0CX08 502 aa3.99□□□□□ -1.77
UBP7YIL156W YNR073CP0CX09 502 aa3.99□□□□□ -1.77
UBP7YIL156W YNL010WP53981 241 aaKnown RBP3.99□□□□□ -1.77
UBP7YIL156W GPI17Q04080 534 aa3.99□□□□□ -1.77
UBP7YIL156W MBF1O14467 151 aaKnown RBP3.99□□□□□ -1.77
UBP7YIL156W AAT2P23542 418 aaKnown RBP3.99□□□□□ -1.77
UBP7YIL156W ELP3Q02908 557 aaKnown RBP3.99□□□□□ -1.77
UBP7YIL156W YPL039WQ03080 316 aa3.99□□□□□ -1.77
UBP7YIL156W API2Q04413 109 aa3.99□□□□□ -1.77
UBP7YIL156W NHP6AP11632 93 aaKnown RBP3.98□□□□□ -1.77
UBP7YIL156W MAG1P22134 296 aaKnown RBP3.98□□□□□ -1.77
UBP7YIL156W CNB1P25296 175 aa3.98□□□□□ -1.77
UBP7YIL156W YKL102CP34249 101 aa3.98□□□□□ -1.77
UBP7YIL156W YER189WP40104 122 aa3.98□□□□□ -1.77
UBP7YIL156W YJL028WP47062 111 aa3.98□□□□□ -1.77
UBP7YIL156W DID2P69771 204 aa3.98□□□□□ -1.77
UBP7YIL156W YPL225WQ08971 146 aaKnown RBP3.98□□□□□ -1.77
UBP7YIL156W CCH1P50077 2039 aa3.98□□□□□ -1.77
UBP7YIL156W DYN2Q02647 92 aa3.98□□□□□ -1.77
UBP7YIL156W DGA1Q08650 418 aa3.98□□□□□ -1.77
UBP7YIL156W ZRT3P34240 503 aa3.97□□□□□ -1.77
UBP7YIL156W TVP38P36164 337 aa3.97□□□□□ -1.77
UBP7YIL156W RPE1P46969 238 aa3.97□□□□□ -1.77
UBP7YIL156W ATG5Q12380 294 aa3.97□□□□□ -1.77
UBP7YIL156W TDA8Q6B2U8 126 aa3.97□□□□□ -1.77
UBP7YIL156W ARO8P53090 500 aaKnown RBP3.97□□□□□ -1.77
UBP7YIL156W ACT1P60010 375 aaKnown RBP3.97□□□□□ -1.77
UBP7YIL156W CSN9Q03981 162 aa3.97□□□□□ -1.77
UBP7YIL156W HTL1Q9URQ5 78 aa3.97□□□□□ -1.77
UBP7YIL156W TMA20P89886 181 aaPredicted RBP3.97□□□□□ -1.77
UBP7YIL156W SRL1Q08673 210 aa3.97□□□□□ -1.77
UBP7YIL156W RIB3Q99258 208 aa3.97□□□□□ -1.77
UBP7YIL156W MRPS28P21771 286 aa3.96□□□□□ -1.78
UBP7YIL156W SFK1P35735 353 aa3.96□□□□□ -1.78
UBP7YIL156W REE1P40893 198 aa3.96□□□□□ -1.78
UBP7YIL156W ARP3P47117 449 aaKnown RBP3.96□□□□□ -1.78
UBP7YIL156W YNL162W-AQ3E7A8 72 aa3.96□□□□□ -1.78
UBP7YIL156W PMD1P32634 1753 aa3.96□□□□□ -1.78
UBP7YIL156W PEX34P25584 144 aa3.96□□□□□ -1.78
UBP7YIL156W MIG3P39943 394 aa3.96□□□□□ -1.78
UBP7YIL156W RBL2P48606 106 aaKnown RBP3.96□□□□□ -1.78
UBP7YIL156W YMD8Q03697 442 aa3.96□□□□□ -1.78
UBP7YIL156W RAV2Q03956 351 aa3.96□□□□□ -1.78
UBP7YIL156W YBL059WP34224 193 aa3.95□□□□□ -1.78
UBP7YIL156W YBL081WP38180 368 aaKnown RBP3.95□□□□□ -1.78
UBP7YIL156W IRC22P40006 225 aa3.95□□□□□ -1.78
UBP7YIL156W YGL118CP53132 145 aa3.95□□□□□ -1.78
UBP7YIL156W GAS3Q03655 524 aa3.95□□□□□ -1.78
UBP7YIL156W GRH1Q04410 372 aaKnown RBP3.95□□□□□ -1.78
UBP7YIL156W MPD1Q12404 318 aaKnown RBP3.95□□□□□ -1.78
UBP7YIL156W UBI4P0CG63 381 aaKnown RBP3.95□□□□□ -1.78
UBP7YIL156W OM14P38325 134 aa3.95□□□□□ -1.78
UBP7YIL156W RIO2P40160 425 aaKnown RBP3.95□□□□□ -1.78
UBP7YIL156W IGD1P43598 195 aa3.95□□□□□ -1.78
UBP7YIL156W MDM34P53083 459 aa3.95□□□□□ -1.78
UBP7YIL156W YGL101WP53144 215 aa3.95□□□□□ -1.78
UBP7YIL156W LPP1Q04396 274 aa3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms