RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C SFT1P43682 97 aa4.29□□□□□ -1.72
SEC9YGR009C MSY1P48527 492 aa4.29□□□□□ -1.72
SEC9YGR009C CAB4P53332 305 aa4.29□□□□□ -1.72
SEC9YGR009C AAH1P53909 347 aa4.29□□□□□ -1.72
SEC9YGR009C YOR376WQ08900 122 aa4.29□□□□□ -1.72
SEC9YGR009C UTP23Q12339 254 aaKnown RBP4.29□□□□□ -1.72
SEC9YGR009C COA6Q3E846 104 aa4.29□□□□□ -1.72
SEC9YGR009C TY1B-GR3Q12316 1755 aa4.28□□□□□ -1.72
SEC9YGR009C TY1B-ORQ92393 1755 aa4.28□□□□□ -1.72
SEC9YGR009C DAT1P13483 248 aaKnown RBP4.28□□□□□ -1.72
SEC9YGR009C INO4P13902 151 aa4.28□□□□□ -1.72
SEC9YGR009C ATG15P25641 520 aa4.28□□□□□ -1.72
SEC9YGR009C TOD6P34219 525 aa4.28□□□□□ -1.72
SEC9YGR009C YKR070WP36151 352 aaKnown RBP4.28□□□□□ -1.72
SEC9YGR009C PTI1P39927 425 aaPredicted RBP4.28□□□□□ -1.72
SEC9YGR009C UTP10P42945 1769 aaKnown RBP4.28□□□□□ -1.72
SEC9YGR009C CUE4Q04201 117 aaPredicted RBP4.28□□□□□ -1.72
SEC9YGR009C YLR049CQ12110 428 aa4.28□□□□□ -1.72
SEC9YGR009C PRS5Q12265 496 aaKnown RBP4.28□□□□□ -1.72
SEC9YGR009C SME1Q12330 94 aaPredicted RBP4.28□□□□□ -1.72
SEC9YGR009C YBL112CQ3E7Y4 105 aa4.28□□□□□ -1.72
SEC9YGR009C YNL277W-AQ3E7Z0 62 aa4.28□□□□□ -1.72
SEC9YGR009C GDB1Q06625 1536 aa4.27□□□□□ -1.73
SEC9YGR009C ILV1P00927 576 aaKnown RBP4.27□□□□□ -1.73
SEC9YGR009C PAI3P01094 68 aa4.27□□□□□ -1.73
SEC9YGR009C RAD6P06104 172 aa4.27□□□□□ -1.73
SEC9YGR009C YCR090CP25654 182 aaKnown RBP4.27□□□□□ -1.73
SEC9YGR009C YPL073CP40323 161 aa4.27□□□□□ -1.73
SEC9YGR009C ATG27P46989 271 aa4.27□□□□□ -1.73
SEC9YGR009C HMS2P47175 358 aa4.27□□□□□ -1.73
SEC9YGR009C CLD1P53264 445 aa4.27□□□□□ -1.73
SEC9YGR009C DUG3P53871 357 aa4.27□□□□□ -1.73
SEC9YGR009C VPS71Q03433 280 aa4.27□□□□□ -1.73
SEC9YGR009C UPS1Q05776 175 aa4.27□□□□□ -1.73
SEC9YGR009C CSI2Q08054 341 aa4.27□□□□□ -1.73
SEC9YGR009C YGK3Q12222 375 aaPredicted RBP4.27□□□□□ -1.73
SEC9YGR009C HUT1Q12520 339 aa4.27□□□□□ -1.73
SEC9YGR009C BOL1Q3E793 110 aa4.27□□□□□ -1.73
SEC9YGR009C YPR170W-BP0C5R9 85 aa4.27□□□□□ -1.73
SEC9YGR009C TEM1P38987 245 aa4.27□□□□□ -1.73
SEC9YGR009C GET2P40056 285 aa4.27□□□□□ -1.73
SEC9YGR009C HST4P53688 370 aa4.27□□□□□ -1.73
SEC9YGR009C YMR317WQ04893 1140 aa4.27□□□□□ -1.73
SEC9YGR009C ORT1Q12375 292 aa4.27□□□□□ -1.73
SEC9YGR009C YOS1Q3E834 85 aa4.27□□□□□ -1.73
SEC9YGR009C ESC1Q03661 1658 aaKnown RBP4.27□□□□□ -1.73
SEC9YGR009C SIR2P06700 562 aa4.26□□□□□ -1.73
SEC9YGR009C NOP1P15646 327 aaKnown RBP4.26□□□□□ -1.73
SEC9YGR009C ERG24P32462 438 aaKnown RBP4.26□□□□□ -1.73
SEC9YGR009C YHK8P38776 514 aa4.26□□□□□ -1.73
SEC9YGR009C RPB11P38902 120 aa4.26□□□□□ -1.73
SEC9YGR009C PFS2P42841 465 aaKnown RBP4.26□□□□□ -1.73
SEC9YGR009C RRT5P43607 289 aa4.26□□□□□ -1.73
SEC9YGR009C SSY5P47002 699 aa4.26□□□□□ -1.73
SEC9YGR009C LSM3P57743 89 aaKnown RBP4.26□□□□□ -1.73
SEC9YGR009C SCW10Q04951 389 aa4.26□□□□□ -1.73
SEC9YGR009C FCF1Q05498 189 aaPredicted RBP4.26□□□□□ -1.73
SEC9YGR009C RPS10AQ08745 105 aaPredicted RBP4.26□□□□□ -1.73
SEC9YGR009C MRH1Q12117 320 aaPredicted RBP4.26□□□□□ -1.73
SEC9YGR009C SWR1Q05471 1514 aa4.26□□□□□ -1.73
SEC9YGR009C ADH1P00330 348 aaKnown RBP4.25□□□□□ -1.73
SEC9YGR009C ADH3P07246 375 aaKnown RBP4.25□□□□□ -1.73
SEC9YGR009C HMRA1P0CY11 126 aa4.25□□□□□ -1.73
SEC9YGR009C COX10P21592 462 aa4.25□□□□□ -1.73
SEC9YGR009C CLB6P32943 380 aa4.25□□□□□ -1.73
SEC9YGR009C AVT2P39981 480 aa4.25□□□□□ -1.73
SEC9YGR009C PUS2P53167 370 aa4.25□□□□□ -1.73
SEC9YGR009C ATP23P53722 227 aa4.25□□□□□ -1.73
SEC9YGR009C RCE1Q03530 315 aa4.25□□□□□ -1.73
SEC9YGR009C RRS1Q08746 203 aaKnown RBP4.25□□□□□ -1.73
SEC9YGR009C YLR412C-AQ3E742 68 aa4.25□□□□□ -1.73
SEC9YGR009C YIL134C-AQ45U18 67 aa4.25□□□□□ -1.73
SEC9YGR009C RPO21P04050 1733 aaKnown RBP4.25□□□□□ -1.73
SEC9YGR009C FAS2P19097 1887 aaKnown RBP4.25□□□□□ -1.73
SEC9YGR009C RPL7AP05737 244 aaKnown RBP4.25□□□□□ -1.73
SEC9YGR009C SEC4P07560 215 aaKnown RBP4.25□□□□□ -1.73
SEC9YGR009C MBR1P23493 339 aa4.25□□□□□ -1.73
SEC9YGR009C RPS2P25443 254 aaKnown RBP4.25□□□□□ -1.73
SEC9YGR009C KAR4P25583 335 aa4.25□□□□□ -1.73
SEC9YGR009C MKK1P32490 508 aa4.25□□□□□ -1.73
SEC9YGR009C SOR1P35497 357 aaKnown RBP4.25□□□□□ -1.73
SEC9YGR009C ARC40P38328 384 aaKnown RBP4.25□□□□□ -1.73
SEC9YGR009C YFR045WP43617 309 aa4.25□□□□□ -1.73
SEC9YGR009C PRY1P47032 299 aa4.25□□□□□ -1.73
SEC9YGR009C SHH4Q06236 168 aa4.25□□□□□ -1.73
SEC9YGR009C SOR2Q07786 357 aa4.25□□□□□ -1.73
SEC9YGR009C COQ10Q08058 207 aa4.25□□□□□ -1.73
SEC9YGR009C YOL131WQ08270 108 aa4.25□□□□□ -1.73
SEC9YGR009C PDR5P33302 1511 aaKnown RBP4.25□□□□□ -1.73
SEC9YGR009C PDR11P40550 1411 aa4.25□□□□□ -1.73
SEC9YGR009C ERS1P17261 260 aa4.24□□□□□ -1.73
SEC9YGR009C YIL029CP40538 142 aa4.24□□□□□ -1.73
SEC9YGR009C YIL024CP40543 189 aa4.24□□□□□ -1.73
SEC9YGR009C PAM16P42949 149 aa4.24□□□□□ -1.73
SEC9YGR009C YFR054CP43622 192 aa4.24□□□□□ -1.73
SEC9YGR009C TTI2P47168 421 aa4.24□□□□□ -1.73
SEC9YGR009C TOS8P53147 276 aa4.24□□□□□ -1.73
SEC9YGR009C THG1P53215 237 aaKnown RBP4.24□□□□□ -1.73
SEC9YGR009C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
SEC9YGR009C YLR126CQ12288 251 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms