RNA–Protein interactions for RNA: YDR297W

SUR2, Transcript of Sphinganine C4-hydroxylase, yeast

Gene SUR2, Length 1,050 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUR2	YDR297W	YLR030W	Q07967	263 aa		4.17	□□□□□ -1.74
SUR2	YDR297W	YOL073C	Q08232	322 aa		4.17	□□□□□ -1.74
SUR2	YDR297W	VPS68	Q12016	184 aa		4.17	□□□□□ -1.74
SUR2	YDR297W	AIM45	Q12480	344 aa	Known RBP	4.17	□□□□□ -1.74
SUR2	YDR297W	MHT1	Q12525	324 aa		4.17	□□□□□ -1.74
SUR2	YDR297W	YCR075W-A	Q3E830	75 aa		4.17	□□□□□ -1.74
SUR2	YDR297W	YPR117W	Q06116	2489 aa		4.16	□□□□□ -1.74
SUR2	YDR297W	ALG7	P07286	448 aa		4.16	□□□□□ -1.74
SUR2	YDR297W	PBI2	P0CT04	75 aa	Known RBP	4.16	□□□□□ -1.74
SUR2	YDR297W	PHO85	P17157	305 aa		4.16	□□□□□ -1.74
SUR2	YDR297W	FUN19	P28003	413 aa	Predicted RBP	4.16	□□□□□ -1.74
SUR2	YDR297W	LDS1	P31379	325 aa		4.16	□□□□□ -1.74
SUR2	YDR297W	ACB1	P31787	87 aa		4.16	□□□□□ -1.74
SUR2	YDR297W	APE2	P32454	952 aa	Known RBP	4.16	□□□□□ -1.74
SUR2	YDR297W	SNC2	P33328	115 aa		4.16	□□□□□ -1.74
SUR2	YDR297W	NTF2	P33331	125 aa	Known RBP	4.16	□□□□□ -1.74
SUR2	YDR297W	SKN1	P33336	771 aa		4.16	□□□□□ -1.74
SUR2	YDR297W	SOR1	P35497	357 aa	Known RBP	4.16	□□□□□ -1.74
SUR2	YDR297W	ERV15	P38312	142 aa		4.16	□□□□□ -1.74
SUR2	YDR297W	ANS1	P38832	159 aa		4.16	□□□□□ -1.74
SUR2	YDR297W	GGC1	P38988	300 aa		4.16	□□□□□ -1.74
SUR2	YDR297W	YAL037W	P39728	267 aa		4.16	□□□□□ -1.74
SUR2	YDR297W	TIF34	P40217	347 aa	Known RBP	4.16	□□□□□ -1.74
SUR2	YDR297W	TAD2	P47058	250 aa		4.16	□□□□□ -1.74
SUR2	YDR297W	YJR015W	P47090	510 aa		4.16	□□□□□ -1.74
SUR2	YDR297W	HHT1	P61830	136 aa		4.16	□□□□□ -1.74
SUR2	YDR297W	YPL068C	Q02749	293 aa		4.16	□□□□□ -1.74
SUR2	YDR297W	SOR2	Q07786	357 aa		4.16	□□□□□ -1.74
SUR2	YDR297W	FDH1	Q08911	376 aa		4.16	□□□□□ -1.74
SUR2	YDR297W	Q0010	Q9ZZX9	128 aa		4.16	□□□□□ -1.74
SUR2	YDR297W	COX5B	P00425	151 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	RPS13	P05756	151 aa	Known RBP	4.15	□□□□□ -1.75
SUR2	YDR297W	YFR010W-A	P0C5N0	62 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	SNC1	P31109	117 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	SPS18	P32572	300 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	PPZ2	P33329	710 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	SFK1	P35735	353 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	SRY1	P36007	326 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	OMA1	P36163	345 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	LAG1	P38703	411 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	RRP4	P38792	359 aa	Known RBP	4.15	□□□□□ -1.75
SUR2	YDR297W	YMR144W	P40214	342 aa	Known RBP	4.15	□□□□□ -1.75
SUR2	YDR297W	SAS2	P40963	338 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	UBP8	P50102	471 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	YGL101W	P53144	215 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	ASI3	P53983	676 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	AIM11	P87275	137 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	RHO4	Q00246	291 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	SPR6	Q01684	191 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	MRX11	Q03079	207 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	RSC9	Q03124	581 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	NUP53	Q03790	475 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	SEC13	Q04491	297 aa	Known RBP	4.15	□□□□□ -1.75
SUR2	YDR297W	YMR320W	Q04897	101 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	CTR3	Q06686	241 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	PFA4	Q12006	378 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	SPC3	Q12133	184 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	FRE8	Q12209	686 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	RPL7B	Q12213	244 aa	Known RBP	4.15	□□□□□ -1.75
SUR2	YDR297W	YDL177C	Q12257	170 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	YLR118C	Q12354	227 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	MHF2	Q3E829	80 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	YDR034W-B	Q6Q5X2	51 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	DET1	Q99288	334 aa	Known RBP	4.15	□□□□□ -1.75
SUR2	YDR297W	MSB2	P32334	1306 aa		4.15	□□□□□ -1.75
SUR2	YDR297W	YPR096C	O13587	100 aa		4.14	□□□□□ -1.75
SUR2	YDR297W	MDM35	O60200	86 aa		4.14	□□□□□ -1.75
SUR2	YDR297W	COX3	P00420	269 aa		4.14	□□□□□ -1.75
SUR2	YDR297W	RPL9A	P05738	191 aa	Known RBP	4.14	□□□□□ -1.75
SUR2	YDR297W	TPK3	P05986	398 aa		4.14	□□□□□ -1.75
SUR2	YDR297W	YER039C-A	P0CD97	72 aa		4.14	□□□□□ -1.75
SUR2	YDR297W	UBI4	P0CG63	381 aa	Known RBP	4.14	□□□□□ -1.75
SUR2	YDR297W	SPT15	P13393	240 aa	Known RBP	4.14	□□□□□ -1.75
SUR2	YDR297W	TRX3	P25372	127 aa		4.14	□□□□□ -1.75
SUR2	YDR297W	TAH1	P25638	111 aa	Predicted RBP	4.14	□□□□□ -1.75
SUR2	YDR297W	OAC1	P32332	324 aa		4.14	□□□□□ -1.75
SUR2	YDR297W	YHR130C	P38834	111 aa		4.14	□□□□□ -1.75
SUR2	YDR297W	YHR177W	P38867	453 aa		4.14	□□□□□ -1.75
SUR2	YDR297W	DIE2	P50076	525 aa		4.14	□□□□□ -1.75
SUR2	YDR297W	RPL9B	P51401	191 aa	Known RBP	4.14	□□□□□ -1.75
SUR2	YDR297W	SDT1	P53078	280 aa		4.14	□□□□□ -1.75
SUR2	YDR297W	ALG13	P53178	202 aa		4.14	□□□□□ -1.75
SUR2	YDR297W	SMM1	P53720	384 aa	Known RBP	4.14	□□□□□ -1.75
SUR2	YDR297W	YIF1	P53845	314 aa	Known RBP	4.14	□□□□□ -1.75
SUR2	YDR297W	SUR7	P54003	302 aa		4.14	□□□□□ -1.75
SUR2	YDR297W	YLR152C	P54072	576 aa		4.14	□□□□□ -1.75
SUR2	YDR297W	COF1	Q03048	143 aa	Known RBP	4.14	□□□□□ -1.75
SUR2	YDR297W	MSS11	Q03825	758 aa		4.14	□□□□□ -1.75
SUR2	YDR297W	HEM25	Q07534	307 aa		4.14	□□□□□ -1.75
SUR2	YDR297W	YOL131W	Q08270	108 aa		4.14	□□□□□ -1.75
SUR2	YDR297W	NCE102	Q12207	173 aa	RIP-Chip data	4.14	□□□□□ -1.75	not detected
SUR2	YDR297W	TFC7	Q12415	435 aa		4.14	□□□□□ -1.75
SUR2	YDR297W	NAG1	Q8TGN9	163 aa		4.14	□□□□□ -1.75
SUR2	YDR297W	SLH1	P53327	1967 aa	Known RBP	4.13	□□□□□ -1.75
SUR2	YDR297W	TIM9	O74700	87 aa		4.13	□□□□□ -1.75
SUR2	YDR297W	RPL12A	P0CX53	165 aa	Known RBP	4.13	□□□□□ -1.75
SUR2	YDR297W	RPL12B	P0CX54	165 aa		4.13	□□□□□ -1.75
SUR2	YDR297W	GAS1	P22146	559 aa	Known RBP	4.13	□□□□□ -1.75
SUR2	YDR297W	HYP2	P23301	157 aa	Known RBP	4.13	□□□□□ -1.75
SUR2	YDR297W	YCR006C	P25350	157 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 73.5 ms