RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR261C-D	YDR261C-D	SNC2	P33328	115 aa		4.08	□□□□□ -1.76
YDR261C-D	YDR261C-D	RRT6	P53117	311 aa	Predicted RBP	4.08	□□□□□ -1.76
YDR261C-D	YDR261C-D	YOL073C	Q08232	322 aa		4.08	□□□□□ -1.76
YDR261C-D	YDR261C-D	TIR4	Q12218	487 aa	Predicted RBP	4.08	□□□□□ -1.76
YDR261C-D	YDR261C-D	PAU1	P0CE88	120 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	PAU14	P0CE89	120 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	PAU6	P0CE90	120 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	PAU18	P0CE91	120 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	PAU8	P0CE92	120 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	PAU11	P0CE93	120 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	RPL12A	P0CX53	165 aa	Known RBP	4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	RPL12B	P0CX54	165 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	GLC7	P32598	312 aa	Known RBP	4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	PAU13	P38725	120 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	TIS11	P47977	285 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	MIC27	P50945	234 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	MST27	P53176	234 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	PAU10	Q03050	120 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	GPI19	Q04082	140 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	PAU20	Q08322	120 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	USB1	Q12208	290 aa	Known RBP	4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	PAU9	Q3E770	120 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	STE7	P06784	515 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	YOL162W	P0CF19	215 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	PFA3	P42836	336 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	PET130	P47065	347 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	DSK2	P48510	373 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	YNL184C	P53876	108 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	SVS1	Q12254	260 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	COA3	Q3E7B2	85 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	DIF1	O13577	133 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	PIC2	P40035	300 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	PAU15	P40585	124 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	ERV29	P53337	310 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	RKI1	Q12189	258 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	RPL9A	P05738	191 aa	Known RBP	4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	CTA1	P15202	515 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	ERG8	P24521	451 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	MRPL9	P31334	269 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	YHL042W	P38729	150 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	YJL007C	P47080	104 aa		4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	RPL9B	P51401	191 aa	Known RBP	4.07	□□□□□ -1.76
YDR261C-D	YDR261C-D	MLF3	P32047	452 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	YIL169C	P40442	995 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	OYE3	P41816	400 aa	Predicted RBP	4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	HPF1	Q05164	967 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	ERP3	Q12403	225 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	CSR2	Q12734	1121 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	SOD2	P00447	233 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	CPA1	P07258	411 aa	Known RBP	4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	RPB8	P20436	146 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	GDA1	P32621	518 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	AVT5	P38176	459 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	LCB3	P47013	409 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	DUG3	P53871	357 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	ERG4	P25340	473 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	PAU7	P39545	55 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	PHS1	P40857	217 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	ECO1	P43605	281 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	MTC3	P53077	123 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	SCW10	Q04951	389 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	YHC1	Q05900	231 aa	Known RBP	4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	PRM7	Q12459	698 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	PPZ2	P33329	710 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	PRM10	P42946	383 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	YGR164W	P53291	111 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	HSK3	P69852	69 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	MSA1	Q08471	629 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	FIT3	Q08907	204 aa		4.06	□□□□□ -1.76
YDR261C-D	YDR261C-D	CHO1	P08456	276 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	PFS2	P42841	465 aa	Known RBP	4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	YNR071C	P53757	342 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	CYT2	Q00873	224 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	RPS15	Q01855	142 aa	Known RBP	4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	SNO1	Q03144	224 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	IRC21	Q04772	201 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	FCF1	Q05498	189 aa	Predicted RBP	4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	ARR3	Q06598	404 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	IRC19	Q07843	230 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	MIM1	Q08176	113 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	NUP170	P38181	1502 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	COX5A	P00424	153 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	COQ2	P32378	372 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	MRPS5	P33759	307 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	YBR184W	P38299	523 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	LSB3	P43603	459 aa	Known RBP	4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	SDS23	P53172	527 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	ASM4	Q05166	528 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	YDR278C	Q05612	105 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	PUS5	Q06244	254 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	YIL102C-A	Q2V2P5	75 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	YFL041W-A	Q3E817	63 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	ATG40	Q99325	256 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	CDC42	P19073	191 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	NUP1	P20676	1076 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	NTF2	P33331	125 aa	Known RBP	4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	SVP26	P38869	228 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	UPS3	Q04006	179 aa		4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	GRH1	Q04410	372 aa	Known RBP	4.05	□□□□□ -1.76
YDR261C-D	YDR261C-D	MCH4	Q08268	501 aa		4.05	□□□□□ -1.76

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