RNA–Protein interactions for RNA: YDR185C

UPS3, Transcript of Mitochondrial protein of unknown function, yeast

Gene UPS3, Length 540 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPS3	YDR185C	YEL075C	P39972	122 aa		4.11	□□□□□ -1.75
UPS3	YDR185C	COQ5	P49017	307 aa		4.11	□□□□□ -1.75
UPS3	YDR185C	YNL184C	P53876	108 aa		4.11	□□□□□ -1.75
UPS3	YDR185C	GRH1	Q04410	372 aa	Known RBP	4.11	□□□□□ -1.75
UPS3	YDR185C	BRX1	Q08235	291 aa	Known RBP	4.11	□□□□□ -1.75
UPS3	YDR185C	YOL160W	Q08321	113 aa		4.11	□□□□□ -1.75
UPS3	YDR185C	YPL257W	Q08974	193 aa		4.11	□□□□□ -1.75
UPS3	YDR185C	YPL264C	Q08980	353 aa		4.11	□□□□□ -1.75
UPS3	YDR185C	YLR050C	Q12155	161 aa	Known RBP	4.11	□□□□□ -1.75
UPS3	YDR185C	YOR020W-A	Q3E824	90 aa		4.11	□□□□□ -1.75
UPS3	YDR185C	CBP6	P07253	162 aa	Predicted RBP	4.1	□□□□□ -1.75
UPS3	YDR185C	YOX1	P34161	385 aa		4.1	□□□□□ -1.75
UPS3	YDR185C	YKR041W	P36134	250 aa		4.1	□□□□□ -1.75
UPS3	YDR185C	MSA2	P36157	363 aa		4.1	□□□□□ -1.75
UPS3	YDR185C	TRR2	P38816	342 aa		4.1	□□□□□ -1.75
UPS3	YDR185C	HMF1	P40037	129 aa	Known RBP	4.1	□□□□□ -1.75
UPS3	YDR185C	YGL235W	P53071	178 aa		4.1	□□□□□ -1.75
UPS3	YDR185C	DID2	P69771	204 aa		4.1	□□□□□ -1.75
UPS3	YDR185C	NUP49	Q02199	472 aa		4.1	□□□□□ -1.75
UPS3	YDR185C	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.1	□□□□□ -1.75
UPS3	YDR185C	UTP20	P35194	2493 aa	Known RBP	4.09	□□□□□ -1.75
UPS3	YDR185C	SIR2	P06700	562 aa		4.09	□□□□□ -1.75
UPS3	YDR185C	DSF1	P0CX08	502 aa		4.09	□□□□□ -1.75
UPS3	YDR185C	YNR073C	P0CX09	502 aa		4.09	□□□□□ -1.75
UPS3	YDR185C	GRX2	P17695	143 aa	Known RBP	4.09	□□□□□ -1.75
UPS3	YDR185C	MAG1	P22134	296 aa	Known RBP	4.09	□□□□□ -1.75
UPS3	YDR185C	CLG1	P35190	452 aa		4.09	□□□□□ -1.75
UPS3	YDR185C	MDM34	P53083	459 aa		4.09	□□□□□ -1.75
UPS3	YDR185C	SMD1	Q02260	146 aa	Predicted RBP	4.09	□□□□□ -1.75
UPS3	YDR185C	GGA1	Q06336	557 aa		4.09	□□□□□ -1.75
UPS3	YDR185C	NIP7	Q08962	181 aa	Known RBP	4.09	□□□□□ -1.75
UPS3	YDR185C	BBP1	Q12365	385 aa		4.09	□□□□□ -1.75
UPS3	YDR185C	PET20	Q99373	253 aa		4.09	□□□□□ -1.75
UPS3	YDR185C	CDC7	P06243	507 aa		4.08	□□□□□ -1.76
UPS3	YDR185C	SNF4	P12904	322 aa		4.08	□□□□□ -1.76
UPS3	YDR185C	DPM1	P14020	267 aa	Known RBP	4.08	□□□□□ -1.76
UPS3	YDR185C	PCL1	P24867	279 aa		4.08	□□□□□ -1.76
UPS3	YDR185C	DER1	P38307	211 aa		4.08	□□□□□ -1.76
UPS3	YDR185C	AST2	P39945	430 aa	Known RBP	4.08	□□□□□ -1.76
UPS3	YDR185C	YIL177C	P40434	1758 aa		4.08	□□□□□ -1.76
UPS3	YDR185C	YJL225C	P40889	1758 aa		4.08	□□□□□ -1.76
UPS3	YDR185C	YFH7	P43591	353 aa		4.08	□□□□□ -1.76
UPS3	YDR185C	UBC12	P52491	188 aa		4.08	□□□□□ -1.76
UPS3	YDR185C	YGR050C	P53231	118 aa		4.08	□□□□□ -1.76
UPS3	YDR185C	HAL1	Q01766	294 aa		4.08	□□□□□ -1.76
UPS3	YDR185C	MRX8	Q05473	314 aa		4.08	□□□□□ -1.76
UPS3	YDR185C	SEN1	Q00416	2231 aa	Known RBP	4.07	□□□□□ -1.76
UPS3	YDR185C	ADH1	P00330	348 aa	Known RBP	4.07	□□□□□ -1.76
UPS3	YDR185C	YPR170W-B	P0C5R9	85 aa		4.07	□□□□□ -1.76
UPS3	YDR185C	CUP2	P15315	225 aa		4.07	□□□□□ -1.76
UPS3	YDR185C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
UPS3	YDR185C	FCY2	P17064	533 aa		4.07	□□□□□ -1.76
UPS3	YDR185C	KDX1	P36005	433 aa		4.07	□□□□□ -1.76
UPS3	YDR185C	SRP102	P36057	244 aa	Predicted RBP	4.07	□□□□□ -1.76
UPS3	YDR185C	RPF1	P38805	295 aa	Known RBP	4.07	□□□□□ -1.76
UPS3	YDR185C	YAR068W	P39564	161 aa		4.07	□□□□□ -1.76
UPS3	YDR185C	LSM4	P40070	187 aa	Known RBP	4.07	□□□□□ -1.76
UPS3	YDR185C	RPA43	P46669	326 aa		4.07	□□□□□ -1.76
UPS3	YDR185C	LSM1	P47017	172 aa	Known RBP	4.07	□□□□□ -1.76
UPS3	YDR185C	SBH2	P52871	88 aa		4.07	□□□□□ -1.76
UPS3	YDR185C	FLC3	P53121	802 aa		4.07	□□□□□ -1.76
UPS3	YDR185C	PRR2	Q12310	699 aa		4.07	□□□□□ -1.76
UPS3	YDR185C	PEX11	Q12462	236 aa		4.07	□□□□□ -1.76
UPS3	YDR185C	APC1	P53886	1748 aa		4.07	□□□□□ -1.76
UPS3	YDR185C	NUP192	P47054	1683 aa		4.06	□□□□□ -1.76
UPS3	YDR185C	ARO7	P32178	256 aa		4.06	□□□□□ -1.76
UPS3	YDR185C	NVJ1	P38881	321 aa		4.06	□□□□□ -1.76
UPS3	YDR185C	IRC22	P40006	225 aa		4.06	□□□□□ -1.76
UPS3	YDR185C	ALG9	P53868	555 aa	Known RBP	4.06	□□□□□ -1.76
UPS3	YDR185C	COG5	P53951	403 aa		4.06	□□□□□ -1.76
UPS3	YDR185C	YNL010W	P53981	241 aa	Known RBP	4.06	□□□□□ -1.76
UPS3	YDR185C	LPP1	Q04396	274 aa		4.06	□□□□□ -1.76
UPS3	YDR185C	TMC1	Q08422	150 aa	Predicted RBP	4.06	□□□□□ -1.76
UPS3	YDR185C	YLR053C	Q12026	108 aa		4.06	□□□□□ -1.76
UPS3	YDR185C	TDA8	Q6B2U8	126 aa		4.06	□□□□□ -1.76
UPS3	YDR185C	FMP27	Q06179	2628 aa		4.06	□□□□□ -1.76
UPS3	YDR185C	RPS28B	P0C0X0	67 aa	Known RBP	4.05	□□□□□ -1.76
UPS3	YDR185C	RPS24A	P0CX31	135 aa	Known RBP	4.05	□□□□□ -1.76
UPS3	YDR185C	RPS24B	P0CX32	135 aa	Known RBP	4.05	□□□□□ -1.76
UPS3	YDR185C	RCN1	P36054	211 aa		4.05	□□□□□ -1.76
UPS3	YDR185C	FIS1	P40515	155 aa		4.05	□□□□□ -1.76
UPS3	YDR185C	FMP32	P43557	207 aa		4.05	□□□□□ -1.76
UPS3	YDR185C	GAS3	Q03655	524 aa		4.05	□□□□□ -1.76
UPS3	YDR185C	NSL1	Q12143	216 aa		4.05	□□□□□ -1.76
UPS3	YDR185C	IES3	Q12345	250 aa		4.05	□□□□□ -1.76
UPS3	YDR185C	GEP5	Q12393	293 aa		4.05	□□□□□ -1.76
UPS3	YDR185C	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.05	□□□□□ -1.76
UPS3	YDR185C	SEC14	P24280	304 aa	Known RBP	4.04	□□□□□ -1.76
UPS3	YDR185C	ATG22	P25568	528 aa		4.04	□□□□□ -1.76
UPS3	YDR185C	YBR063C	P38083	404 aa		4.04	□□□□□ -1.76
UPS3	YDR185C	COS8	P38723	381 aa		4.04	□□□□□ -1.76
UPS3	YDR185C	GLE2	P40066	365 aa		4.04	□□□□□ -1.76
UPS3	YDR185C	YFL012W	P43580	148 aa		4.04	□□□□□ -1.76
UPS3	YDR185C	SUE1	Q06524	206 aa		4.04	□□□□□ -1.76
UPS3	YDR185C	YPL162C	Q12042	273 aa		4.04	□□□□□ -1.76
UPS3	YDR185C	YRF1-3	P0CX14	1859 aa		4.04	□□□□□ -1.76
UPS3	YDR185C	YRF1-7	P0CX15	1859 aa		4.04	□□□□□ -1.76
UPS3	YDR185C	YRF1-6	P53819	1859 aa		4.04	□□□□□ -1.76
UPS3	YDR185C	IRA1	P18963	3092 aa		4.04	□□□□□ -1.76
UPS3	YDR185C	PRP8	P33334	2413 aa	Known RBP	4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 63.3 ms