RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A YDL211CQ12121 372 aa2.56□□□□□ -2
RIM1YCR028C-A VMA9Q3E7B6 73 aa2.56□□□□□ -2
RIM1YCR028C-A DET1Q99288 334 aaKnown RBP2.56□□□□□ -2
RIM1YCR028C-A MSB2P32334 1306 aa2.56□□□□□ -2
RIM1YCR028C-A UBI4P0CG63 381 aaKnown RBP2.55□□□□□ -2
RIM1YCR028C-A RPL40AP0CH08 128 aaKnown RBP2.55□□□□□ -2
RIM1YCR028C-A RPL40BP0CH09 128 aaKnown RBP2.55□□□□□ -2
RIM1YCR028C-A APA2P22108 325 aa2.55□□□□□ -2
RIM1YCR028C-A MSK1P32048 576 aa2.55□□□□□ -2
RIM1YCR028C-A ERG24P32462 438 aaKnown RBP2.55□□□□□ -2
RIM1YCR028C-A YBL010CP32788 280 aa2.55□□□□□ -2
RIM1YCR028C-A SUI1P32911 108 aaKnown RBP2.55□□□□□ -2
RIM1YCR028C-A VAM7P32912 316 aa2.55□□□□□ -2
RIM1YCR028C-A GPX1P36014 167 aa2.55□□□□□ -2
RIM1YCR028C-A VPS51P36116 164 aa2.55□□□□□ -2
RIM1YCR028C-A MRPL27P36526 146 aaPredicted RBP2.55□□□□□ -2
RIM1YCR028C-A PEX32P38292 413 aa2.55□□□□□ -2
RIM1YCR028C-A ECM34P38728 170 aa2.55□□□□□ -2
RIM1YCR028C-A TRR2P38816 342 aa2.55□□□□□ -2
RIM1YCR028C-A POP2P39008 433 aa2.55□□□□□ -2
RIM1YCR028C-A RPL13BP40212 199 aaKnown RBP2.55□□□□□ -2
RIM1YCR028C-A OSW5P40219 148 aa2.55□□□□□ -2
RIM1YCR028C-A IBA57P47158 497 aa2.55□□□□□ -2
RIM1YCR028C-A VEL1P53058 206 aa2.55□□□□□ -2
RIM1YCR028C-A YGL235WP53071 178 aa2.55□□□□□ -2
RIM1YCR028C-A PNC1P53184 216 aaKnown RBP2.55□□□□□ -2
RIM1YCR028C-A YGR042WP53227 271 aa2.55□□□□□ -2
RIM1YCR028C-A FMP41P53889 259 aaKnown RBP2.55□□□□□ -2
RIM1YCR028C-A ACT1P60010 375 aaKnown RBP2.55□□□□□ -2
RIM1YCR028C-A YCL001W-AP87012 153 aa2.55□□□□□ -2
RIM1YCR028C-A RPL21AQ02753 160 aaKnown RBP2.55□□□□□ -2
RIM1YCR028C-A SNX41Q04053 625 aa2.55□□□□□ -2
RIM1YCR028C-A TAZ1Q06510 381 aa2.55□□□□□ -2
RIM1YCR028C-A ATG10Q07879 167 aa2.55□□□□□ -2
RIM1YCR028C-A SDO1Q07953 250 aaKnown RBP2.55□□□□□ -2
RIM1YCR028C-A BRX1Q08235 291 aaKnown RBP2.55□□□□□ -2
RIM1YCR028C-A TFC7Q12415 435 aa2.55□□□□□ -2
RIM1YCR028C-A RPL21BQ12672 160 aaKnown RBP2.55□□□□□ -2
RIM1YCR028C-A RPL13AQ12690 199 aaPredicted RBP2.55□□□□□ -2
RIM1YCR028C-A MATALPHA1P0CY06 175 aa2.54□□□□□ -2
RIM1YCR028C-A HMLALPHA1P0CY07 175 aa2.54□□□□□ -2
RIM1YCR028C-A URA6P15700 204 aa2.54□□□□□ -2
RIM1YCR028C-A SEC22P22214 214 aa2.54□□□□□ -2
RIM1YCR028C-A TIM12P32830 109 aa2.54□□□□□ -2
RIM1YCR028C-A YKL071WP36086 256 aa2.54□□□□□ -2
RIM1YCR028C-A MRPL37P36532 105 aa2.54□□□□□ -2
RIM1YCR028C-A ERV15P38312 142 aa2.54□□□□□ -2
RIM1YCR028C-A TAE1P38340 232 aa2.54□□□□□ -2
RIM1YCR028C-A WSS1P38838 269 aa2.54□□□□□ -2
RIM1YCR028C-A PEX22P39718 180 aa2.54□□□□□ -2
RIM1YCR028C-A AVT7P40501 490 aa2.54□□□□□ -2
RIM1YCR028C-A YIR035CP40579 254 aa2.54□□□□□ -2
RIM1YCR028C-A RPL10P41805 221 aaKnown RBP2.54□□□□□ -2
RIM1YCR028C-A NSE4P43124 402 aa2.54□□□□□ -2
RIM1YCR028C-A YJR111CP47148 283 aaKnown RBP2.54□□□□□ -2
RIM1YCR028C-A UFD1P53044 361 aa2.54□□□□□ -2
RIM1YCR028C-A CDH1P53197 566 aa2.54□□□□□ -2
RIM1YCR028C-A YNR062CP53748 327 aa2.54□□□□□ -2
RIM1YCR028C-A HNT1Q04344 158 aaKnown RBP2.54□□□□□ -2
RIM1YCR028C-A FIT1Q04433 528 aa2.54□□□□□ -2
RIM1YCR028C-A YDR115WQ04598 105 aa2.54□□□□□ -2
RIM1YCR028C-A MRX8Q05473 314 aa2.54□□□□□ -2
RIM1YCR028C-A YPR172WQ06608 200 aa2.54□□□□□ -2
RIM1YCR028C-A BER1Q06688 274 aaKnown RBP2.54□□□□□ -2
RIM1YCR028C-A YPR063CQ12160 140 aa2.54□□□□□ -2
RIM1YCR028C-A MED4Q12343 284 aa2.54□□□□□ -2
RIM1YCR028C-A YLR146W-AQ2V2P1 62 aa2.54□□□□□ -2
RIM1YCR028C-A ODC2Q99297 307 aa2.54□□□□□ -2
RIM1YCR028C-A HEM4P06174 275 aa2.53□□□□□ -2
RIM1YCR028C-A ADH3P07246 375 aaKnown RBP2.53□□□□□ -2
RIM1YCR028C-A YPK2P18961 677 aa2.53□□□□□ -2
RIM1YCR028C-A SEC59P20048 519 aa2.53□□□□□ -2
RIM1YCR028C-A SCL1P21243 252 aaKnown RBP2.53□□□□□ -2
RIM1YCR028C-A GPI12P23797 304 aa2.53□□□□□ -2
RIM1YCR028C-A RPL16AP26784 199 aaKnown RBP2.53□□□□□ -2
RIM1YCR028C-A TRR1P29509 319 aaKnown RBP2.53□□□□□ -2
RIM1YCR028C-A MDH3P32419 343 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
RIM1YCR028C-A SNC2P33328 115 aa2.53□□□□□ -2
RIM1YCR028C-A MSN4P33749 630 aa2.53□□□□□ -2
RIM1YCR028C-A CPR5P35176 225 aa2.53□□□□□ -2
RIM1YCR028C-A SRP102P36057 244 aaPredicted RBP2.53□□□□□ -2
RIM1YCR028C-A ATG8P38182 117 aaRIP-Chip data2.53□□□□□ -2not detected
RIM1YCR028C-A PRP39P39682 629 aaKnown RBP2.53□□□□□ -2
RIM1YCR028C-A OTU1P43558 301 aa2.53□□□□□ -2
RIM1YCR028C-A YHC3P47040 408 aa2.53□□□□□ -2
RIM1YCR028C-A GPI14P47088 403 aaKnown RBP2.53□□□□□ -2
RIM1YCR028C-A ADO1P47143 340 aaKnown RBP2.53□□□□□ -2
RIM1YCR028C-A SEH1P53011 349 aaKnown RBP2.53□□□□□ -2
RIM1YCR028C-A NIF3P53081 288 aa2.53□□□□□ -2
RIM1YCR028C-A TIM21P53220 239 aa2.53□□□□□ -2
RIM1YCR028C-A YML018CQ03730 393 aa2.53□□□□□ -2
RIM1YCR028C-A RVB1Q03940 463 aaKnown RBP2.53□□□□□ -2
RIM1YCR028C-A CAB5Q03941 241 aa2.53□□□□□ -2
RIM1YCR028C-A FSH2Q05015 223 aa2.53□□□□□ -2
RIM1YCR028C-A NMA1Q06178 401 aaKnown RBP2.53□□□□□ -2
RIM1YCR028C-A YFH1Q07540 174 aa2.53□□□□□ -2
RIM1YCR028C-A DGK1Q12382 290 aa2.53□□□□□ -2
RIM1YCR028C-A PET20Q99373 253 aa2.53□□□□□ -2
RIM1YCR028C-A TPI1P00942 248 aaKnown RBP2.52□□□□□ -2.01
RIM1YCR028C-A MSW1P04803 379 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 52 ms