RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A RPS19AP07280 144 aaKnown RBP19.31■□□□□ 0.68
TRN1tP(UGG)A RPS19BP07281 144 aaPredicted RBP19.31■□□□□ 0.68
TRN1tP(UGG)A BOI2P39969 1040 aa19.29■□□□□ 0.68
TRN1tP(UGG)A MSN5P52918 1224 aa19.29■□□□□ 0.68
TRN1tP(UGG)A HAT1Q12341 374 aa19.29■□□□□ 0.68
TRN1tP(UGG)A SSK22P25390 1331 aaPredicted RBP19.28■□□□□ 0.68
TRN1tP(UGG)A EAF6P47128 113 aa19.27■□□□□ 0.68
TRN1tP(UGG)A BDF2Q07442 638 aa19.27■□□□□ 0.68
TRN1tP(UGG)A YNG2P38806 282 aaKnown RBP19.26■□□□□ 0.67
TRN1tP(UGG)A SET1P38827 1080 aaKnown RBP19.26■□□□□ 0.67
TRN1tP(UGG)A POL32P47110 350 aa19.26■□□□□ 0.67
TRN1tP(UGG)A DIB1Q06819 143 aaPredicted RBP19.26■□□□□ 0.67
TRN1tP(UGG)A PUF6Q04373 656 aaKnown RBP19.25■□□□□ 0.67
TRN1tP(UGG)A ITC1P53125 1264 aa19.24■□□□□ 0.67
TRN1tP(UGG)A PSH1Q12161 406 aa19.24■□□□□ 0.67
TRN1tP(UGG)A UBP12P39538 1254 aa19.23■□□□□ 0.67
TRN1tP(UGG)A SPO1P53541 631 aa19.23■□□□□ 0.67
TRN1tP(UGG)A IRC3Q06683 689 aa19.22■□□□□ 0.67
TRN1tP(UGG)A PFF1P38244 976 aa19.21■□□□□ 0.67
TRN1tP(UGG)A ILV3P39522 585 aaKnown RBP19.21■□□□□ 0.67
TRN1tP(UGG)A ERT1P38140 529 aa19.18■□□□□ 0.66
TRN1tP(UGG)A FPR3P38911 411 aaKnown RBP19.18■□□□□ 0.66
TRN1tP(UGG)A SMY1P32364 656 aaKnown RBP19.17■□□□□ 0.66
TRN1tP(UGG)A YKL222CP35995 705 aa19.17■□□□□ 0.66
TRN1tP(UGG)A CWH41P53008 833 aa19.17■□□□□ 0.66
TRN1tP(UGG)A CAF20P12962 161 aaKnown RBP19.16■□□□□ 0.66
TRN1tP(UGG)A CTT1P06115 562 aa19.15■□□□□ 0.66
TRN1tP(UGG)A HXT10P43581 546 aa19.15■□□□□ 0.66
TRN1tP(UGG)A SAC3P46674 1301 aa19.15■□□□□ 0.66
TRN1tP(UGG)A UBP16Q02863 499 aa19.14■□□□□ 0.65
TRN1tP(UGG)A MTC5Q03897 1148 aa19.14■□□□□ 0.65
TRN1tP(UGG)A SYF1Q04048 859 aaPredicted RBP19.14■□□□□ 0.65
TRN1tP(UGG)A RPN1P38764 993 aaKnown RBP19.12■□□□□ 0.65
TRN1tP(UGG)A SUP35P05453 685 aaKnown RBP19.11■□□□□ 0.65
TRN1tP(UGG)A GCD7P32502 381 aaPredicted RBP19.11■□□□□ 0.65
TRN1tP(UGG)A YER156CP40093 338 aaKnown RBP19.11■□□□□ 0.65
TRN1tP(UGG)A ERO1Q03103 563 aa19.11■□□□□ 0.65
TRN1tP(UGG)A FRD1P32614 470 aaKnown RBP19.1■□□□□ 0.65
TRN1tP(UGG)A KIN4Q01919 800 aa19.1■□□□□ 0.65
TRN1tP(UGG)A SAS4Q04003 481 aa19.1■□□□□ 0.65
TRN1tP(UGG)A HGH1P48362 394 aaKnown RBP19.09■□□□□ 0.65
TRN1tP(UGG)A SIT4P20604 311 aa19.08■□□□□ 0.64
TRN1tP(UGG)A SNU66Q12420 587 aaPredicted RBP19.07■□□□□ 0.64
TRN1tP(UGG)A NMD2P38798 1089 aaKnown RBP19.06■□□□□ 0.64
TRN1tP(UGG)A DPH6Q12429 685 aa19.05■□□□□ 0.64
TRN1tP(UGG)A DUR1,2P32528 1835 aaKnown RBP19.04■□□□□ 0.64
TRN1tP(UGG)A SLA1P32790 1244 aa19.04■□□□□ 0.64
TRN1tP(UGG)A NGR1P32831 672 aaKnown RBP19.03■□□□□ 0.64
TRN1tP(UGG)A SSF1P38789 453 aaPredicted RBP19.03■□□□□ 0.64
TRN1tP(UGG)A HKR1P41809 1802 aa19.02■□□□□ 0.64
TRN1tP(UGG)A THI3Q07471 609 aa19■□□□□ 0.63
TRN1tP(UGG)A ICP55P40051 511 aa18.99■□□□□ 0.63
TRN1tP(UGG)A NCB2Q92317 146 aa18.99■□□□□ 0.63
TRN1tP(UGG)A SSA1P10591 642 aaKnown RBP18.98■□□□□ 0.63
TRN1tP(UGG)A MGM1P32266 881 aa18.98■□□□□ 0.63
TRN1tP(UGG)A GRX6Q12438 231 aa18.98■□□□□ 0.63
TRN1tP(UGG)A ICL1P28240 557 aaPredicted RBP18.96■□□□□ 0.63
TRN1tP(UGG)A BDP1P46678 594 aa18.96■□□□□ 0.63
TRN1tP(UGG)A GYP5Q12344 894 aa18.96■□□□□ 0.63
TRN1tP(UGG)A RPT4P53549 437 aaKnown RBP18.95■□□□□ 0.62
TRN1tP(UGG)A SRC1Q03707 834 aa18.95■□□□□ 0.62
TRN1tP(UGG)A ADR1P07248 1323 aa18.95■□□□□ 0.62
TRN1tP(UGG)A FAS2P19097 1887 aaKnown RBP18.94■□□□□ 0.62
TRN1tP(UGG)A TOP1P04786 769 aa18.93■□□□□ 0.62
TRN1tP(UGG)A FIG2P25653 1609 aa18.92■□□□□ 0.62
TRN1tP(UGG)A KRE2P27809 442 aa18.92■□□□□ 0.62
TRN1tP(UGG)A SEC18P18759 758 aaKnown RBP18.91■□□□□ 0.62
TRN1tP(UGG)A RET1P22276 1149 aaKnown RBP18.91■□□□□ 0.62
TRN1tP(UGG)A YKU70P32807 602 aa18.91■□□□□ 0.62
TRN1tP(UGG)A SPL2P38839 148 aa18.91■□□□□ 0.62
TRN1tP(UGG)A POM152P39685 1337 aa18.91■□□□□ 0.62
TRN1tP(UGG)A AI2P03876 854 aa18.9■□□□□ 0.62
TRN1tP(UGG)A RFC1P38630 861 aaKnown RBP18.89■□□□□ 0.61
TRN1tP(UGG)A SQS1P53866 767 aaKnown RBP18.88■□□□□ 0.61
TRN1tP(UGG)A SET4P42948 560 aa18.87■□□□□ 0.61
TRN1tP(UGG)A PDR18P53756 1333 aa18.87■□□□□ 0.61
TRN1tP(UGG)A UBX2Q04228 584 aa18.87■□□□□ 0.61
TRN1tP(UGG)A NKP2Q06162 153 aa18.87■□□□□ 0.61
TRN1tP(UGG)A YNL193WP53870 558 aa18.86■□□□□ 0.61
TRN1tP(UGG)A ECM16Q04217 1267 aaKnown RBP18.86■□□□□ 0.61
TRN1tP(UGG)A NOT3P06102 836 aaKnown RBP18.85■□□□□ 0.61
TRN1tP(UGG)A YGL242CP53066 181 aa18.85■□□□□ 0.61
TRN1tP(UGG)A RPN7Q06103 429 aaKnown RBP18.85■□□□□ 0.61
TRN1tP(UGG)A RRI2Q12348 645 aa18.85■□□□□ 0.61
TRN1tP(UGG)A KTR3P38130 404 aaPredicted RBP18.84■□□□□ 0.61
TRN1tP(UGG)A MLC1P53141 149 aa18.84■□□□□ 0.61
TRN1tP(UGG)A IRC4Q03036 179 aa18.84■□□□□ 0.61
TRN1tP(UGG)A ECM21P38167 1117 aaKnown RBP18.83■□□□□ 0.6
TRN1tP(UGG)A NUG1P40010 520 aaKnown RBP18.83■□□□□ 0.6
TRN1tP(UGG)A SHC1P39000 512 aa18.82■□□□□ 0.6
TRN1tP(UGG)A CDC16P09798 840 aa18.81■□□□□ 0.6
TRN1tP(UGG)A TIF4632P39936 914 aaKnown RBP18.81■□□□□ 0.6
TRN1tP(UGG)A DPL1Q05567 589 aa18.8■□□□□ 0.6
TRN1tP(UGG)A RPS9BP05755 195 aaKnown RBP18.79■□□□□ 0.6
TRN1tP(UGG)A LCB1P25045 558 aaKnown RBP18.79■□□□□ 0.6
TRN1tP(UGG)A ALO1P54783 526 aaKnown RBP18.79■□□□□ 0.6
TRN1tP(UGG)A DIP2Q12220 943 aaPredicted RBP18.79■□□□□ 0.6
TRN1tP(UGG)A RMD1Q03441 430 aa18.78■□□□□ 0.6
TRN1tP(UGG)A GLO3P38682 493 aaKnown RBP18.77■□□□□ 0.6
TRN1tP(UGG)A GSM1P42950 618 aa18.77■□□□□ 0.6
Retrieved 100 of 5,963 RNA–protein pairs in 77.8 ms