RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 ARI1P53111 347 aaKnown RBP1.97□□□□□ -2.09
snR50snR50 SAC7P17121 654 aa1.96□□□□□ -2.1
snR50snR50 SEA4P38164 1038 aa1.96□□□□□ -2.1
snR50snR50 MSC7P38694 644 aa1.96□□□□□ -2.1
snR50snR50 FIG4P42837 879 aa1.96□□□□□ -2.1
snR50snR50 MRPL16P38064 232 aa1.95□□□□□ -2.1
snR50snR50 NIT1P40447 199 aa1.95□□□□□ -2.1
snR50snR50 SPR3P41901 512 aa1.95□□□□□ -2.1
snR50snR50 HDA2Q06629 674 aa1.95□□□□□ -2.1
snR50snR50 NHA1Q99271 985 aa1.95□□□□□ -2.1
snR50snR50 LRG1P35688 1017 aa1.94□□□□□ -2.1
snR50snR50 ISU1Q03020 165 aa1.94□□□□□ -2.1
snR50snR50 FRA1Q07825 749 aa1.94□□□□□ -2.1
snR50snR50 NGR1P32831 672 aaKnown RBP1.93□□□□□ -2.1
snR50snR50 PGM2P37012 569 aaKnown RBP1.93□□□□□ -2.1
snR50snR50 SHM1P37292 490 aaPredicted RBP1.93□□□□□ -2.1
snR50snR50 YPR084WQ06821 456 aa1.93□□□□□ -2.1
snR50snR50 RSC30P38781 883 aa1.92□□□□□ -2.1
snR50snR50 COQ2P32378 372 aa1.91□□□□□ -2.1
snR50snR50 YGR130CP53278 816 aa1.91□□□□□ -2.1
snR50snR50 PSH1Q12161 406 aa1.91□□□□□ -2.1
snR50snR50 SFA1P32771 386 aa1.9□□□□□ -2.11
snR50snR50 THI80P35202 319 aa1.9□□□□□ -2.11
snR50snR50 AHP1P38013 176 aaKnown RBP1.9□□□□□ -2.11
snR50snR50 DLD3P39976 496 aaKnown RBP1.9□□□□□ -2.11
snR50snR50 HST2P53686 357 aa1.9□□□□□ -2.11
snR50snR50 YML122CQ03207 126 aa1.9□□□□□ -2.11
snR50snR50 NAR1P23503 491 aaKnown RBP1.89□□□□□ -2.11
snR50snR50 ALG14P38242 237 aa1.89□□□□□ -2.11
snR50snR50 STB3Q12427 513 aa1.89□□□□□ -2.11
snR50snR50 PDC6P26263 563 aaKnown RBP1.88□□□□□ -2.11
snR50snR50 IRE1P32361 1115 aa1.88□□□□□ -2.11
snR50snR50 YMR196WQ04336 1088 aa1.88□□□□□ -2.11
snR50snR50 WTM2Q12206 467 aa1.88□□□□□ -2.11
snR50snR50 CYC7P00045 113 aa1.87□□□□□ -2.11
snR50snR50 SAF1P38352 637 aa1.87□□□□□ -2.11
snR50snR50 RRM3P38766 723 aa1.87□□□□□ -2.11
snR50snR50 JJJ2P46997 583 aa1.87□□□□□ -2.11
snR50snR50 VPS70P47161 811 aa1.87□□□□□ -2.11
snR50snR50 GIS4Q04233 774 aa1.87□□□□□ -2.11
snR50snR50 MCM16Q12262 181 aa1.87□□□□□ -2.11
snR50snR50 RPS31P05759 152 aaKnown RBP1.86□□□□□ -2.11
snR50snR50 FLR1P38124 548 aa1.86□□□□□ -2.11
snR50snR50 CDA2Q06703 312 aa1.86□□□□□ -2.11
snR50snR50 YJU3P28321 313 aa1.85□□□□□ -2.11
snR50snR50 TSA1P34760 196 aaKnown RBP1.85□□□□□ -2.11
snR50snR50 SPO74P45819 413 aa1.85□□□□□ -2.11
snR50snR50 ATG20Q07528 640 aa1.85□□□□□ -2.11
snR50snR50 CHS2P14180 963 aa1.84□□□□□ -2.11
snR50snR50 ECL1P48235 211 aa1.84□□□□□ -2.11
snR50snR50 MMP1Q12372 583 aa1.84□□□□□ -2.11
snR50snR50 ESS1P22696 170 aa1.83□□□□□ -2.12
snR50snR50 PRK1P40494 810 aa1.83□□□□□ -2.12
snR50snR50 PUF3Q07807 879 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
snR50snR50 RPP2BP02400 110 aaKnown RBP1.82□□□□□ -2.12
snR50snR50 SPT2P06843 333 aaPredicted RBP1.82□□□□□ -2.12
snR50snR50 LEU1P07264 779 aaKnown RBP1.82□□□□□ -2.12
snR50snR50 GAS1P22146 559 aaKnown RBP1.82□□□□□ -2.12
snR50snR50 NAM7P30771 971 aaKnown RBP1.82□□□□□ -2.12
snR50snR50 POL12P38121 705 aaPredicted RBP1.82□□□□□ -2.12
snR50snR50 YNR065CP53751 1116 aa1.82□□□□□ -2.12
snR50snR50 RAD59Q12223 238 aa1.82□□□□□ -2.12
snR50snR50 TEC1P18412 486 aa1.81□□□□□ -2.12
snR50snR50 ALD2P47771 506 aa1.81□□□□□ -2.12
snR50snR50 DFG16Q99234 619 aa1.81□□□□□ -2.12
snR50snR50 RSC6P25632 483 aa1.8□□□□□ -2.12
snR50snR50 UTP7P40055 554 aaKnown RBP1.8□□□□□ -2.12
snR50snR50 SUM1P46676 1062 aa1.8□□□□□ -2.12
snR50snR50 NUP42P49686 430 aaKnown RBP1.8□□□□□ -2.12
snR50snR50 PRP43P53131 767 aaKnown RBP1.8□□□□□ -2.12
snR50snR50 SDH1Q00711 640 aa1.8□□□□□ -2.12
snR50snR50 GSF2Q04697 403 aaKnown RBP1.8□□□□□ -2.12
snR50snR50 NFS1P25374 497 aa1.79□□□□□ -2.12
snR50snR50 PBS2P08018 668 aa1.78□□□□□ -2.12
snR50snR50 YHL008CP38750 627 aa1.78□□□□□ -2.12
snR50snR50 TY1A-NL1Q12391 440 aaKnown RBP1.78□□□□□ -2.12
snR50snR50 GLN1P32288 370 aaKnown RBP1.77□□□□□ -2.13
snR50snR50 AKR1P39010 764 aa1.77□□□□□ -2.13
snR50snR50 RGP1P16664 663 aa1.76□□□□□ -2.13
snR50snR50 ALA1P40825 983 aaKnown RBP1.76□□□□□ -2.13
snR50snR50 DAT1P13483 248 aaKnown RBP1.75□□□□□ -2.13
snR50snR50 IES2P40154 320 aa1.75□□□□□ -2.13
snR50snR50 SNM1P40993 198 aa1.75□□□□□ -2.13
snR50snR50 REC8Q12188 680 aa1.75□□□□□ -2.13
snR50snR50 GCD1P09032 578 aaPredicted RBP1.74□□□□□ -2.13
snR50snR50 PRP6P19735 899 aaPredicted RBP1.74□□□□□ -2.13
snR50snR50 NAB2P32505 525 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
snR50snR50 UTR2P32623 467 aa1.74□□□□□ -2.13
snR50snR50 ABZ1P37254 787 aaPredicted RBP1.74□□□□□ -2.13
snR50snR50 HEH2Q03281 663 aa1.74□□□□□ -2.13
snR50snR50 MAM3Q12296 706 aa1.74□□□□□ -2.13
snR50snR50 MSB1P21339 1137 aaKnown RBP1.73□□□□□ -2.13
snR50snR50 TY4B-PA0A0B7P3V8 1104 aa1.72□□□□□ -2.13
snR50snR50 MRP10O75012 95 aa1.72□□□□□ -2.13
snR50snR50 GUT2P32191 649 aa1.72□□□□□ -2.13
snR50snR50 YPQ2Q06328 317 aa1.72□□□□□ -2.13
snR50snR50 TY4A-HQ6Q5P6 413 aa1.72□□□□□ -2.13
snR50snR50 RPP1AP05318 106 aaPredicted RBP1.71□□□□□ -2.14
snR50snR50 DIT2P21595 489 aa1.71□□□□□ -2.14
snR50snR50 SLX8P40072 274 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 58.5 ms