RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeastyeast

Gene PRE2, Length 864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE2YPR103W CDC4P07834 779 aa8.98□□□□□ -0.97
PRE2YPR103W TRL1P09880 827 aaKnown RBP8.98□□□□□ -0.97
PRE2YPR103W NGR1P32831 672 aaKnown RBP8.98□□□□□ -0.97
PRE2YPR103W TBS1P38114 1094 aa8.98□□□□□ -0.97
PRE2YPR103W SLD2P34252 453 aa8.95□□□□□ -0.98
PRE2YPR103W YPQ2Q06328 317 aa8.95□□□□□ -0.98
PRE2YPR103W DPS1P04802 557 aaKnown RBP8.94□□□□□ -0.98
PRE2YPR103W ASH1P34233 588 aa8.94□□□□□ -0.98
PRE2YPR103W UTP7P40055 554 aaKnown RBP8.94□□□□□ -0.98
PRE2YPR103W MDJ2P42834 146 aa8.94□□□□□ -0.98
PRE2YPR103W AFT1P22149 690 aa8.93□□□□□ -0.98
PRE2YPR103W BOI1P38041 980 aaKnown RBP8.93□□□□□ -0.98
PRE2YPR103W YBR197CP38306 217 aa8.92□□□□□ -0.98
PRE2YPR103W RTT106P40161 455 aa8.92□□□□□ -0.98
PRE2YPR103W RPP2BP02400 110 aaKnown RBP8.91□□□□□ -0.98
PRE2YPR103W GRS1P38088 690 aaKnown RBP8.91□□□□□ -0.98
PRE2YPR103W SUM1P46676 1062 aa8.91□□□□□ -0.98
PRE2YPR103W MSB3P48566 633 aaPredicted RBP8.91□□□□□ -0.98
PRE2YPR103W CWH41P53008 833 aa8.91□□□□□ -0.98
PRE2YPR103W ATG1P53104 897 aa8.91□□□□□ -0.98
PRE2YPR103W FUR4P05316 633 aaKnown RBP8.9□□□□□ -0.98
PRE2YPR103W UGA3P26370 528 aa8.9□□□□□ -0.98
PRE2YPR103W CAB1Q04430 367 aa8.9□□□□□ -0.98
PRE2YPR103W LSO1Q3E827 93 aa8.9□□□□□ -0.98
PRE2YPR103W HXT5P38695 592 aa8.89□□□□□ -0.99
PRE2YPR103W HST3P53687 447 aa8.89□□□□□ -0.99
PRE2YPR103W MCM1P11746 286 aa8.88□□□□□ -0.99
PRE2YPR103W IPL1P38991 367 aa8.88□□□□□ -0.99
PRE2YPR103W STM1P39015 273 aaKnown RBP8.88□□□□□ -0.99
PRE2YPR103W DLD3P39976 496 aaKnown RBP8.88□□□□□ -0.99
PRE2YPR103W AAD14P42884 376 aa8.88□□□□□ -0.99
PRE2YPR103W ISC10P32645 267 aa8.87□□□□□ -0.99
PRE2YPR103W GLO3P38682 493 aaKnown RBP8.87□□□□□ -0.99
PRE2YPR103W QDR1P40475 563 aa8.87□□□□□ -0.99
PRE2YPR103W RRN6P32786 894 aa8.86□□□□□ -0.99
PRE2YPR103W FOX2Q02207 900 aaKnown RBP8.86□□□□□ -0.99
PRE2YPR103W YHL050CP38721 697 aa8.85□□□□□ -0.99
PRE2YPR103W YHR219WP38900 624 aa8.85□□□□□ -0.99
PRE2YPR103W SSN3P39073 555 aa8.85□□□□□ -0.99
PRE2YPR103W MSC6Q08818 692 aaKnown RBP8.85□□□□□ -0.99
PRE2YPR103W ARG82P07250 355 aa8.84□□□□□ -0.99
PRE2YPR103W PTK2P47116 818 aaKnown RBP8.84□□□□□ -0.99
PRE2YPR103W ACF4P47129 309 aa8.84□□□□□ -0.99
PRE2YPR103W YJR115WP47152 169 aa8.84□□□□□ -0.99
PRE2YPR103W YNL165WP53891 406 aa8.84□□□□□ -0.99
PRE2YPR103W HEM3P28789 327 aa8.83□□□□□ -1
PRE2YPR103W NUT2Q06213 157 aa8.82□□□□□ -1
PRE2YPR103W APC11Q12157 165 aa8.82□□□□□ -1
PRE2YPR103W FRT1Q99332 602 aa8.82□□□□□ -1
PRE2YPR103W KTR2P33550 425 aa8.81□□□□□ -1
PRE2YPR103W RPB10P22139 70 aa8.8□□□□□ -1
PRE2YPR103W DLD1P32891 587 aa8.8□□□□□ -1
PRE2YPR103W SHM1P37292 490 aaPredicted RBP8.8□□□□□ -1
PRE2YPR103W RPS31P05759 152 aaKnown RBP8.79□□□□□ -1
PRE2YPR103W MRPL33P20084 86 aa8.79□□□□□ -1
PRE2YPR103W SEC20P28791 383 aa8.79□□□□□ -1
PRE2YPR103W WHI5Q12416 295 aa8.79□□□□□ -1
PRE2YPR103W Q0182Q9ZZW1 134 aa8.79□□□□□ -1
PRE2YPR103W SCD5P34758 872 aa8.78□□□□□ -1
PRE2YPR103W ALA1P40825 983 aaKnown RBP8.78□□□□□ -1
PRE2YPR103W MSN5P52918 1224 aa8.78□□□□□ -1
PRE2YPR103W PPX1P38698 397 aa8.77□□□□□ -1.01
PRE2YPR103W JJJ2P46997 583 aa8.77□□□□□ -1.01
PRE2YPR103W SRC1Q03707 834 aa8.77□□□□□ -1.01
PRE2YPR103W TY1A-DR3Q12441 440 aa8.77□□□□□ -1.01
PRE2YPR103W VMA3P25515 160 aa8.76□□□□□ -1.01
PRE2YPR103W SLA1P32790 1244 aa8.76□□□□□ -1.01
PRE2YPR103W YJR098CP47139 656 aa8.76□□□□□ -1.01
PRE2YPR103W MLF3P32047 452 aa8.75□□□□□ -1.01
PRE2YPR103W NUP85P46673 744 aa8.75□□□□□ -1.01
PRE2YPR103W SRF1Q12516 437 aa8.75□□□□□ -1.01
PRE2YPR103W TRK1P12685 1235 aa8.74□□□□□ -1.01
PRE2YPR103W RRP15Q06511 250 aaPredicted RBP8.74□□□□□ -1.01
PRE2YPR103W UTP4Q06679 776 aaKnown RBP8.74□□□□□ -1.01
PRE2YPR103W GPI13Q07830 1017 aa8.74□□□□□ -1.01
PRE2YPR103W DAL1P32375 460 aa8.73□□□□□ -1.01
PRE2YPR103W SPR3P41901 512 aa8.73□□□□□ -1.01
PRE2YPR103W TRS120Q04183 1289 aa8.73□□□□□ -1.01
PRE2YPR103W MNL2Q12205 849 aa8.73□□□□□ -1.01
PRE2YPR103W IRE1P32361 1115 aa8.72□□□□□ -1.01
PRE2YPR103W SUT1P53032 299 aaKnown RBP8.72□□□□□ -1.01
PRE2YPR103W ATE1P16639 503 aa8.71□□□□□ -1.02
PRE2YPR103W MET4P32389 672 aa8.71□□□□□ -1.02
PRE2YPR103W VTC4P47075 721 aa8.71□□□□□ -1.02
PRE2YPR103W LSC2P53312 427 aa8.7□□□□□ -1.02
PRE2YPR103W QDR2P40474 542 aa8.69□□□□□ -1.02
PRE2YPR103W PSH1Q12161 406 aa8.69□□□□□ -1.02
PRE2YPR103W TCB1Q12466 1186 aa8.69□□□□□ -1.02
PRE2YPR103W PDC6P26263 563 aaKnown RBP8.68□□□□□ -1.02
PRE2YPR103W AHP1P38013 176 aaKnown RBP8.68□□□□□ -1.02
PRE2YPR103W THI12P42883 340 aa8.68□□□□□ -1.02
PRE2YPR103W THI5P43534 340 aa8.68□□□□□ -1.02
PRE2YPR103W THI11P47183 340 aa8.68□□□□□ -1.02
PRE2YPR103W THI13Q07748 340 aa8.68□□□□□ -1.02
PRE2YPR103W ALD2P47771 506 aa8.67□□□□□ -1.02
PRE2YPR103W LDH1P38139 375 aa8.66□□□□□ -1.02
PRE2YPR103W HXT8P40886 569 aa8.66□□□□□ -1.02
PRE2YPR103W POL32P47110 350 aa8.66□□□□□ -1.02
PRE2YPR103W UFD2P54860 961 aa8.66□□□□□ -1.02
PRE2YPR103W LEU1P07264 779 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 34 ms