RNA–Protein interactions for RNA: YPR032W

SRO7, Transcript of Effector of Rab GTPase Sec4p, yeast

Gene SRO7, Length 3,102 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRO7	YPR032W	YSH1	Q06224	779 aa	Predicted RBP	4.59	□□□□□ -1.67
SRO7	YPR032W	VPS20	Q04272	221 aa		4.59	□□□□□ -1.67
SRO7	YPR032W	PUF6	Q04373	656 aa	Known RBP	4.59	□□□□□ -1.67
SRO7	YPR032W	TLG2	Q08144	397 aa		4.59	□□□□□ -1.67
SRO7	YPR032W	MDM38	Q08179	573 aa		4.59	□□□□□ -1.67
SRO7	YPR032W	KAR3	P17119	729 aa		4.59	□□□□□ -1.68
SRO7	YPR032W	PRD1	P25375	712 aa		4.59	□□□□□ -1.68
SRO7	YPR032W	RSC8	P43609	557 aa	Known RBP	4.59	□□□□□ -1.68
SRO7	YPR032W	RFC1	P38630	861 aa	Known RBP	4.58	□□□□□ -1.68
SRO7	YPR032W	IAH1	P41734	238 aa		4.58	□□□□□ -1.68
SRO7	YPR032W	SSL2	Q00578	843 aa		4.58	□□□□□ -1.68
SRO7	YPR032W	APL5	Q08951	932 aa	Known RBP	4.58	□□□□□ -1.68
SRO7	YPR032W	BCK1	Q01389	1478 aa		4.58	□□□□□ -1.68
SRO7	YPR032W	TPD3	P31383	635 aa		4.58	□□□□□ -1.68
SRO7	YPR032W	MNR2	P35724	969 aa		4.58	□□□□□ -1.68
SRO7	YPR032W	SPE2	P21182	396 aa		4.57	□□□□□ -1.68
SRO7	YPR032W	SEC14	P24280	304 aa	Known RBP	4.57	□□□□□ -1.68
SRO7	YPR032W	HSP104	P31539	908 aa	Known RBP	4.57	□□□□□ -1.68
SRO7	YPR032W	CTK3	P46963	296 aa	Predicted RBP	4.57	□□□□□ -1.68
SRO7	YPR032W	GYL1	Q04322	720 aa		4.57	□□□□□ -1.68
SRO7	YPR032W	NKP2	Q06162	153 aa		4.57	□□□□□ -1.68
SRO7	YPR032W	APC11	Q12157	165 aa		4.57	□□□□□ -1.68
SRO7	YPR032W	RNR2	P09938	399 aa	Known RBP	4.57	□□□□□ -1.68
SRO7	YPR032W	RTR1	P40084	226 aa	Predicted RBP	4.57	□□□□□ -1.68
SRO7	YPR032W	NDC80	P40460	691 aa		4.57	□□□□□ -1.68
SRO7	YPR032W	PAP2	P53632	584 aa	Known RBP	4.57	□□□□□ -1.68
SRO7	YPR032W	MAK21	Q12176	1025 aa	Known RBP	4.57	□□□□□ -1.68
SRO7	YPR032W	BIK1	P11709	440 aa		4.57	□□□□□ -1.68
SRO7	YPR032W	ATE1	P16639	503 aa		4.57	□□□□□ -1.68
SRO7	YPR032W	RPC82	P32349	654 aa		4.57	□□□□□ -1.68
SRO7	YPR032W	BRN1	P38170	754 aa		4.57	□□□□□ -1.68
SRO7	YPR032W	OLA1	P38219	394 aa	Known RBP	4.57	□□□□□ -1.68
SRO7	YPR032W	NPR3	P38742	1146 aa		4.57	□□□□□ -1.68
SRO7	YPR032W	ILV3	P39522	585 aa	Known RBP	4.57	□□□□□ -1.68
SRO7	YPR032W	CKB1	P43639	278 aa		4.57	□□□□□ -1.68
SRO7	YPR032W	NDL1	Q06568	189 aa		4.57	□□□□□ -1.68
SRO7	YPR032W	YPL225W	Q08971	146 aa	Known RBP	4.57	□□□□□ -1.68
SRO7	YPR032W	MBR1	P23493	339 aa		4.56	□□□□□ -1.68
SRO7	YPR032W	ATG9	Q12142	997 aa		4.56	□□□□□ -1.68
SRO7	YPR032W	DNM1	P54861	757 aa		4.56	□□□□□ -1.68
SRO7	YPR032W	PEX19	Q07418	342 aa		4.56	□□□□□ -1.68
SRO7	YPR032W	ABP140	Q08641	628 aa	Known RBP	4.56	□□□□□ -1.68
SRO7	YPR032W	MSB4	Q12317	492 aa		4.56	□□□□□ -1.68
SRO7	YPR032W	CDC16	P09798	840 aa		4.55	□□□□□ -1.68
SRO7	YPR032W	PRP31	P49704	494 aa	Predicted RBP	4.55	□□□□□ -1.68
SRO7	YPR032W	INP2	Q03824	705 aa		4.55	□□□□□ -1.68
SRO7	YPR032W	DPH5	P32469	300 aa	Predicted RBP	4.55	□□□□□ -1.68
SRO7	YPR032W	GDT1	P38301	280 aa	Predicted RBP	4.55	□□□□□ -1.68
SRO7	YPR032W	VPS8	P39702	1274 aa		4.55	□□□□□ -1.68
SRO7	YPR032W	HXT13	P39924	564 aa		4.55	□□□□□ -1.68
SRO7	YPR032W	VID30	P53076	958 aa		4.55	□□□□□ -1.68
SRO7	YPR032W	TRP5	P00931	707 aa	Known RBP	4.55	□□□□□ -1.68
SRO7	YPR032W	ARD1	P07347	238 aa	Predicted RBP	4.55	□□□□□ -1.68
SRO7	YPR032W	PET123	P17558	318 aa		4.55	□□□□□ -1.68
SRO7	YPR032W	MUD2	P36084	527 aa	Known RBP	4.55	□□□□□ -1.68
SRO7	YPR032W	TTI1	P36097	1038 aa		4.55	□□□□□ -1.68
SRO7	YPR032W	DID4	P36108	232 aa		4.55	□□□□□ -1.68
SRO7	YPR032W	MPH1	P40562	993 aa		4.55	□□□□□ -1.68
SRO7	YPR032W	RTT109	Q07794	436 aa		4.55	□□□□□ -1.68
SRO7	YPR032W	SLP1	Q12232	587 aa		4.55	□□□□□ -1.68
SRO7	YPR032W	GIN4	Q12263	1142 aa		4.55	□□□□□ -1.68
SRO7	YPR032W	RRP14	P36080	434 aa	Known RBP	4.54	□□□□□ -1.68
SRO7	YPR032W	TPS3	P38426	1054 aa	Known RBP	4.54	□□□□□ -1.68
SRO7	YPR032W	YAP3	P38749	330 aa		4.54	□□□□□ -1.68
SRO7	YPR032W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
SRO7	YPR032W	STE20	Q03497	939 aa	Known RBP	4.54	□□□□□ -1.68
SRO7	YPR032W	UBX2	Q04228	584 aa		4.54	□□□□□ -1.68
SRO7	YPR032W	AOS1	Q06624	347 aa		4.54	□□□□□ -1.68
SRO7	YPR032W	PSO2	P30620	661 aa		4.54	□□□□□ -1.68
SRO7	YPR032W	PUP2	P32379	260 aa		4.54	□□□□□ -1.68
SRO7	YPR032W	RGD1	P38339	666 aa		4.54	□□□□□ -1.68
SRO7	YPR032W	CCT5	P40413	562 aa	Known RBP	4.54	□□□□□ -1.68
SRO7	YPR032W	MRX12	P47084	519 aa		4.54	□□□□□ -1.68
SRO7	YPR032W	FRS2	P15625	503 aa	Known RBP	4.53	□□□□□ -1.68
SRO7	YPR032W	MRPS28	P21771	286 aa		4.53	□□□□□ -1.68
SRO7	YPR032W	SAP1	P39955	897 aa	Known RBP	4.53	□□□□□ -1.68
SRO7	YPR032W	BDP1	P46678	594 aa		4.53	□□□□□ -1.68
SRO7	YPR032W	MAL13	P53338	473 aa		4.53	□□□□□ -1.68
SRO7	YPR032W	RRP1	P35178	278 aa	Predicted RBP	4.53	□□□□□ -1.68
SRO7	YPR032W	TLG1	Q03322	224 aa		4.53	□□□□□ -1.68
SRO7	YPR032W	YOR389W	Q08912	624 aa		4.53	□□□□□ -1.68
SRO7	YPR032W	CTH1	P47976	325 aa		4.52	□□□□□ -1.69
SRO7	YPR032W	HXT17	P53631	564 aa		4.52	□□□□□ -1.69
SRO7	YPR032W	RPS0A	P32905	252 aa	Known RBP	4.52	□□□□□ -1.69
SRO7	YPR032W	MFT1	P33441	392 aa	Known RBP	4.52	□□□□□ -1.69
SRO7	YPR032W	RFC5	P38251	354 aa		4.52	□□□□□ -1.69
SRO7	YPR032W	CUS1	Q02554	436 aa	Predicted RBP	4.52	□□□□□ -1.69
SRO7	YPR032W	NFI1	Q12216	726 aa		4.52	□□□□□ -1.69
SRO7	YPR032W	DDP1	Q99321	188 aa	Known RBP	4.52	□□□□□ -1.69
SRO7	YPR032W	SES1	P07284	462 aa	Known RBP	4.52	□□□□□ -1.69
SRO7	YPR032W	ARP5	P53946	755 aa		4.52	□□□□□ -1.69
SRO7	YPR032W	PEA2	P40091	420 aa		4.51	□□□□□ -1.69
SRO7	YPR032W	HOS4	P40480	1083 aa		4.51	□□□□□ -1.69
SRO7	YPR032W	RPO41	P13433	1351 aa	Known RBP	4.51	□□□□□ -1.69
SRO7	YPR032W	PXL1	P36166	706 aa		4.51	□□□□□ -1.69
SRO7	YPR032W	YMR124W	P39523	943 aa	Known RBP	4.51	□□□□□ -1.69
SRO7	YPR032W	NCS2	P53923	493 aa	Predicted RBP	4.51	□□□□□ -1.69
SRO7	YPR032W	VTC3	Q02725	835 aa		4.51	□□□□□ -1.69
SRO7	YPR032W	RLP24	Q07915	199 aa	Known RBP	4.51	□□□□□ -1.69
SRO7	YPR032W	DPB3	P27344	201 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms