RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C YJR008WP47085 338 aa10.16□□□□□ -0.78
RPD3YNL330C FPR4Q06205 392 aaPredicted RBP10.16□□□□□ -0.78
RPD3YNL330C TRL1P09880 827 aaKnown RBP10.15□□□□□ -0.78
RPD3YNL330C PTP3P40048 928 aa10.15□□□□□ -0.78
RPD3YNL330C HYR1P40581 163 aaKnown RBP10.15□□□□□ -0.78
RPD3YNL330C ZDS2P54786 942 aa10.15□□□□□ -0.78
RPD3YNL330C ECM21P38167 1117 aaKnown RBP10.14□□□□□ -0.79
RPD3YNL330C RSM25P40496 264 aa10.14□□□□□ -0.79
RPD3YNL330C HRQ1Q05549 1077 aa10.14□□□□□ -0.79
RPD3YNL330C SWI1P09547 1314 aa10.14□□□□□ -0.79
RPD3YNL330C PDR18P53756 1333 aa10.14□□□□□ -0.79
RPD3YNL330C MIF2P35201 549 aa10.13□□□□□ -0.79
RPD3YNL330C UBP12P39538 1254 aa10.13□□□□□ -0.79
RPD3YNL330C CIR1P42940 261 aa10.13□□□□□ -0.79
RPD3YNL330C RSC1P53236 928 aa10.13□□□□□ -0.79
RPD3YNL330C BRE1Q07457 700 aaKnown RBP10.13□□□□□ -0.79
RPD3YNL330C AIM44Q99299 758 aa10.13□□□□□ -0.79
RPD3YNL330C KEX1P09620 729 aa10.12□□□□□ -0.79
RPD3YNL330C OSM1P21375 501 aaKnown RBP10.12□□□□□ -0.79
RPD3YNL330C YGL081WP53156 320 aa10.12□□□□□ -0.79
RPD3YNL330C RIM20Q12033 661 aa10.12□□□□□ -0.79
RPD3YNL330C RPN12P32496 274 aa10.11□□□□□ -0.79
RPD3YNL330C KRI1P42846 591 aaKnown RBP10.11□□□□□ -0.79
RPD3YNL330C MLC1P53141 149 aa10.11□□□□□ -0.79
RPD3YNL330C LPD1P09624 499 aaKnown RBP10.1□□□□□ -0.79
RPD3YNL330C AAP1P37898 856 aaKnown RBP10.1□□□□□ -0.79
RPD3YNL330C RKM3P38222 552 aa10.1□□□□□ -0.79
RPD3YNL330C RVS167P39743 482 aaKnown RBP10.1□□□□□ -0.79
RPD3YNL330C RMT2Q03305 412 aa10.1□□□□□ -0.79
RPD3YNL330C ADE16P54113 591 aaKnown RBP10.09□□□□□ -0.79
RPD3YNL330C CTR9P89105 1077 aa10.09□□□□□ -0.79
RPD3YNL330C RMD1Q03441 430 aa10.09□□□□□ -0.79
RPD3YNL330C TPM1P17536 199 aaKnown RBP10.08□□□□□ -0.8
RPD3YNL330C YGL242CP53066 181 aa10.08□□□□□ -0.8
RPD3YNL330C YBP2P53169 641 aa10.08□□□□□ -0.8
RPD3YNL330C VPS64Q03944 604 aa10.08□□□□□ -0.8
RPD3YNL330C ATG13Q06628 738 aa10.08□□□□□ -0.8
RPD3YNL330C DUR1,2P32528 1835 aaKnown RBP10.08□□□□□ -0.8
RPD3YNL330C RPL19AP0CX82 189 aaKnown RBP10.07□□□□□ -0.8
RPD3YNL330C RPL19BP0CX83 189 aaPredicted RBP10.07□□□□□ -0.8
RPD3YNL330C SET1P38827 1080 aaKnown RBP10.07□□□□□ -0.8
RPD3YNL330C MDG1P53885 366 aa10.07□□□□□ -0.8
RPD3YNL330C SSP2Q08646 371 aa10.07□□□□□ -0.8
RPD3YNL330C SPO22P40511 975 aa10.07□□□□□ -0.8
RPD3YNL330C MRPS35P53292 345 aa10.07□□□□□ -0.8
RPD3YNL330C KRE33P53914 1056 aaKnown RBP10.07□□□□□ -0.8
RPD3YNL330C MIC60P36112 540 aa10.06□□□□□ -0.8
RPD3YNL330C AIM9P40053 627 aaKnown RBP10.06□□□□□ -0.8
RPD3YNL330C IES2P40154 320 aa10.06□□□□□ -0.8
RPD3YNL330C PEX14P53112 341 aa10.06□□□□□ -0.8
RPD3YNL330C ETT1Q08421 412 aaKnown RBP10.06□□□□□ -0.8
RPD3YNL330C NOP53Q12080 455 aaKnown RBP10.06□□□□□ -0.8
RPD3YNL330C APC11Q12157 165 aa10.06□□□□□ -0.8
RPD3YNL330C SUP35P05453 685 aaKnown RBP10.05□□□□□ -0.8
RPD3YNL330C KTR1P27810 393 aaKnown RBP10.05□□□□□ -0.8
RPD3YNL330C ALO1P54783 526 aaKnown RBP10.05□□□□□ -0.8
RPD3YNL330C YLR271WQ06152 274 aa10.05□□□□□ -0.8
RPD3YNL330C PEX19Q07418 342 aa10.05□□□□□ -0.8
RPD3YNL330C ELM1P32801 640 aa10.04□□□□□ -0.8
RPD3YNL330C YKL133CP36066 463 aa10.04□□□□□ -0.8
RPD3YNL330C TTI1P36097 1038 aa10.04□□□□□ -0.8
RPD3YNL330C TAF13P11747 167 aa10.03□□□□□ -0.8
RPD3YNL330C STM1P39015 273 aaKnown RBP10.03□□□□□ -0.8
RPD3YNL330C FRK1Q03002 865 aaPredicted RBP10.03□□□□□ -0.8
RPD3YNL330C PKH1Q03407 766 aa10.03□□□□□ -0.8
RPD3YNL330C PRX1P34227 261 aaKnown RBP10.02□□□□□ -0.81
RPD3YNL330C CCT5P40413 562 aaKnown RBP10.02□□□□□ -0.81
RPD3YNL330C CWH41P53008 833 aa10.02□□□□□ -0.81
RPD3YNL330C MTC5Q03897 1148 aa10.02□□□□□ -0.81
RPD3YNL330C ESC2Q06340 456 aa10.02□□□□□ -0.81
RPD3YNL330C YPR204WQ08995 1032 aa10.02□□□□□ -0.81
RPD3YNL330C PSH1Q12161 406 aa10.02□□□□□ -0.81
RPD3YNL330C ENT1Q12518 454 aa10.02□□□□□ -0.81
RPD3YNL330C YRF1-3P0CX14 1859 aa10.01□□□□□ -0.81
RPD3YNL330C YRF1-7P0CX15 1859 aa10.01□□□□□ -0.81
RPD3YNL330C YRF1-6P53819 1859 aa10.01□□□□□ -0.81
RPD3YNL330C APL2P36000 726 aaPredicted RBP10.01□□□□□ -0.81
RPD3YNL330C DID4P36108 232 aa10.01□□□□□ -0.81
RPD3YNL330C KTR3P38130 404 aaPredicted RBP10.01□□□□□ -0.81
RPD3YNL330C NOP58Q12499 511 aaKnown RBP10.01□□□□□ -0.81
RPD3YNL330C MCM2P29469 868 aa10□□□□□ -0.81
RPD3YNL330C PSK2Q08217 1101 aa10□□□□□ -0.81
RPD3YNL330C RIM101P33400 625 aa9.99□□□□□ -0.81
RPD3YNL330C OSH3P38713 996 aaKnown RBP9.99□□□□□ -0.81
RPD3YNL330C CTF18P49956 741 aa9.99□□□□□ -0.81
RPD3YNL330C ARP5P53946 755 aa9.99□□□□□ -0.81
RPD3YNL330C GYP5Q12344 894 aa9.99□□□□□ -0.81
RPD3YNL330C MRPL10P36520 322 aa9.98□□□□□ -0.81
RPD3YNL330C PHM7Q12252 991 aa9.98□□□□□ -0.81
RPD3YNL330C MPE1P35728 441 aaKnown RBP9.97□□□□□ -0.81
RPD3YNL330C YKR023WP36119 530 aaKnown RBP9.97□□□□□ -0.81
RPD3YNL330C HXT10P43581 546 aa9.97□□□□□ -0.81
RPD3YNL330C PIB2P53191 635 aa9.97□□□□□ -0.81
RPD3YNL330C ELG1Q12050 791 aa9.97□□□□□ -0.81
RPD3YNL330C ARG8P18544 423 aa9.96□□□□□ -0.82
RPD3YNL330C PBY1P38254 753 aa9.96□□□□□ -0.82
RPD3YNL330C TUM1Q08686 304 aaKnown RBP9.96□□□□□ -0.82
RPD3YNL330C YPL150WQ12152 901 aa9.96□□□□□ -0.82
RPD3YNL330C SNU66Q12420 587 aaPredicted RBP9.96□□□□□ -0.82
RPD3YNL330C SSK22P25390 1331 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms