RNA–Protein interactions for RNA: YNL308C

KRI1, Transcript of Essential nucleolar protein required for 40S ribosome biogenesis, yeast

Gene KRI1, Length 1,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KRI1	YNL308C	FBP26	P32604	452 aa		4.58	□□□□□ -1.68
KRI1	YNL308C	NUG1	P40010	520 aa	Known RBP	4.58	□□□□□ -1.68
KRI1	YNL308C	HDA3	Q06623	655 aa		4.58	□□□□□ -1.68
KRI1	YNL308C	PEP1	P32319	1579 aa		4.58	□□□□□ -1.68
KRI1	YNL308C	PDR10	P51533	1564 aa		4.58	□□□□□ -1.68
KRI1	YNL308C	CDC3	P32457	520 aa	Known RBP	4.58	□□□□□ -1.68
KRI1	YNL308C	MNN4	P36044	1178 aa		4.58	□□□□□ -1.68
KRI1	YNL308C	AIM9	P40053	627 aa	Known RBP	4.58	□□□□□ -1.68
KRI1	YNL308C	YFL034W	P43564	1073 aa		4.58	□□□□□ -1.68
KRI1	YNL308C	ISU1	Q03020	165 aa		4.58	□□□□□ -1.68
KRI1	YNL308C	SLD2	P34252	453 aa		4.57	□□□□□ -1.68
KRI1	YNL308C	FPR3	P38911	411 aa	Known RBP	4.57	□□□□□ -1.68
KRI1	YNL308C	ROM1	P53046	1155 aa		4.57	□□□□□ -1.68
KRI1	YNL308C	UTR2	P32623	467 aa		4.56	□□□□□ -1.68
KRI1	YNL308C	YBL086C	P38177	466 aa		4.56	□□□□□ -1.68
KRI1	YNL308C	DFG5	Q05031	458 aa		4.56	□□□□□ -1.68
KRI1	YNL308C	GAS4	Q08271	471 aa		4.56	□□□□□ -1.68
KRI1	YNL308C	MET32	Q12041	191 aa		4.56	□□□□□ -1.68
KRI1	YNL308C	DPS1	P04802	557 aa	Known RBP	4.55	□□□□□ -1.68
KRI1	YNL308C	NTH2	P35172	780 aa		4.55	□□□□□ -1.68
KRI1	YNL308C	POL5	P39985	1022 aa	Known RBP	4.55	□□□□□ -1.68
KRI1	YNL308C	AIR1	P40507	360 aa	Known RBP	4.55	□□□□□ -1.68
KRI1	YNL308C	SPT2	P06843	333 aa	Predicted RBP	4.55	□□□□□ -1.68
KRI1	YNL308C	DAT1	P13483	248 aa	Known RBP	4.55	□□□□□ -1.68
KRI1	YNL308C	IOC4	Q04213	475 aa		4.55	□□□□□ -1.68
KRI1	YNL308C	CDC4	P07834	779 aa		4.54	□□□□□ -1.68
KRI1	YNL308C	STE6	P12866	1290 aa		4.54	□□□□□ -1.68
KRI1	YNL308C	SNU71	P53207	620 aa	Known RBP	4.54	□□□□□ -1.68
KRI1	YNL308C	PUF6	Q04373	656 aa	Known RBP	4.54	□□□□□ -1.68
KRI1	YNL308C	BDS1	Q08347	646 aa		4.54	□□□□□ -1.68
KRI1	YNL308C	SWR1	Q05471	1514 aa		4.53	□□□□□ -1.68
KRI1	YNL308C	RPS6A	P0CX37	236 aa	Known RBP	4.53	□□□□□ -1.68
KRI1	YNL308C	RPS6B	P0CX38	236 aa	Predicted RBP	4.53	□□□□□ -1.68
KRI1	YNL308C	VAN1	P23642	535 aa		4.53	□□□□□ -1.68
KRI1	YNL308C	DEF1	P35732	738 aa	Known RBP	4.53	□□□□□ -1.68
KRI1	YNL308C	TBS1	P38114	1094 aa		4.53	□□□□□ -1.68
KRI1	YNL308C	RPP2B	P02400	110 aa	Known RBP	4.53	□□□□□ -1.69
KRI1	YNL308C	HST3	P53687	447 aa		4.53	□□□□□ -1.69
KRI1	YNL308C	CWC15	Q03772	175 aa	Known RBP	4.53	□□□□□ -1.69
KRI1	YNL308C	WTM2	Q12206	467 aa		4.53	□□□□□ -1.69
KRI1	YNL308C	SWI5	P08153	709 aa		4.52	□□□□□ -1.69
KRI1	YNL308C	UGA3	P26370	528 aa		4.52	□□□□□ -1.69
KRI1	YNL308C	ASH1	P34233	588 aa		4.52	□□□□□ -1.69
KRI1	YNL308C	TPS3	P38426	1054 aa	Known RBP	4.52	□□□□□ -1.69
KRI1	YNL308C	RGA1	P39083	1007 aa		4.52	□□□□□ -1.69
KRI1	YNL308C	YRB30	P53107	440 aa	Predicted RBP	4.52	□□□□□ -1.69
KRI1	YNL308C	PUN1	Q06991	263 aa		4.52	□□□□□ -1.69
KRI1	YNL308C	HAT1	Q12341	374 aa		4.52	□□□□□ -1.69
KRI1	YNL308C	SRB8	P25648	1427 aa		4.51	□□□□□ -1.69
KRI1	YNL308C	QCR6	P00127	147 aa		4.51	□□□□□ -1.69
KRI1	YNL308C	CYT1	P07143	309 aa		4.51	□□□□□ -1.69
KRI1	YNL308C	RTT106	P40161	455 aa		4.51	□□□□□ -1.69
KRI1	YNL308C	TRS33	Q99394	268 aa		4.51	□□□□□ -1.69
KRI1	YNL308C	MLP2	P40457	1679 aa		4.51	□□□□□ -1.69
KRI1	YNL308C	BUD4	P47136	1447 aa		4.51	□□□□□ -1.69
KRI1	YNL308C	AFT1	P22149	690 aa		4.5	□□□□□ -1.69
KRI1	YNL308C	SNF7	P39929	240 aa	Known RBP	4.5	□□□□□ -1.69
KRI1	YNL308C	DLD3	P39976	496 aa	Known RBP	4.5	□□□□□ -1.69
KRI1	YNL308C	SSM4	P40318	1319 aa		4.5	□□□□□ -1.69
KRI1	YNL308C	IKI3	Q06706	1349 aa	Known RBP	4.5	□□□□□ -1.69
KRI1	YNL308C	TOP2	P06786	1428 aa	Known RBP	4.5	□□□□□ -1.69
KRI1	YNL308C	NUP170	P38181	1502 aa		4.5	□□□□□ -1.69
KRI1	YNL308C	RPC31	P17890	251 aa		4.5	□□□□□ -1.69
KRI1	YNL308C	UBP1	P25037	809 aa		4.5	□□□□□ -1.69
KRI1	YNL308C	MSB3	P48566	633 aa	Predicted RBP	4.5	□□□□□ -1.69
KRI1	YNL308C	PNP1	Q05788	311 aa		4.5	□□□□□ -1.69
KRI1	YNL308C	FPR4	Q06205	392 aa	Predicted RBP	4.5	□□□□□ -1.69
KRI1	YNL308C	SRS2	P12954	1174 aa		4.49	□□□□□ -1.69
KRI1	YNL308C	SSF1	P38789	453 aa	Predicted RBP	4.49	□□□□□ -1.69
KRI1	YNL308C	UTP7	P40055	554 aa	Known RBP	4.49	□□□□□ -1.69
KRI1	YNL308C	KAR5	Q04746	504 aa		4.49	□□□□□ -1.69
KRI1	YNL308C	SUV3	P32580	737 aa		4.48	□□□□□ -1.69
KRI1	YNL308C	ALD4	P46367	519 aa	Known RBP	4.48	□□□□□ -1.69
KRI1	YNL308C	CWH41	P53008	833 aa		4.48	□□□□□ -1.69
KRI1	YNL308C	EAF7	P53911	425 aa	Known RBP	4.48	□□□□□ -1.69
KRI1	YNL308C	YLR419W	Q06698	1435 aa	Known RBP	4.48	□□□□□ -1.69
KRI1	YNL308C	MYO2	P19524	1574 aa	Known RBP	4.48	□□□□□ -1.69
KRI1	YNL308C	THO2	P53552	1597 aa	Known RBP	4.48	□□□□□ -1.69
KRI1	YNL308C	NGR1	P32831	672 aa	Known RBP	4.48	□□□□□ -1.69
KRI1	YNL308C	MET10	P39692	1035 aa		4.48	□□□□□ -1.69
KRI1	YNL308C	FUN12	P39730	1002 aa	Known RBP	4.48	□□□□□ -1.69
KRI1	YNL308C	PSH1	Q12161	406 aa		4.48	□□□□□ -1.69
KRI1	YNL308C	SPT6	P23615	1451 aa	Known RBP	4.47	□□□□□ -1.69
KRI1	YNL308C	YTA7	P40340	1379 aa		4.47	□□□□□ -1.69
KRI1	YNL308C	ARG82	P07250	355 aa		4.47	□□□□□ -1.69
KRI1	YNL308C	HEM3	P28789	327 aa		4.47	□□□□□ -1.69
KRI1	YNL308C	AAD14	P42884	376 aa		4.47	□□□□□ -1.69
KRI1	YNL308C	SUM1	P46676	1062 aa		4.47	□□□□□ -1.69
KRI1	YNL308C	YBL113C	Q7M4S9	792 aa		4.47	□□□□□ -1.69
KRI1	YNL308C	SPC110	P32380	944 aa		4.46	□□□□□ -1.7
KRI1	YNL308C	BOL3	P39724	118 aa		4.46	□□□□□ -1.7
KRI1	YNL308C	PTK2	P47116	818 aa	Known RBP	4.46	□□□□□ -1.7
KRI1	YNL308C	YJR115W	P47152	169 aa		4.46	□□□□□ -1.7
KRI1	YNL308C	YPQ2	Q06328	317 aa		4.46	□□□□□ -1.7
KRI1	YNL308C	SRF1	Q12516	437 aa		4.46	□□□□□ -1.7
KRI1	YNL308C	MMS1	Q06211	1407 aa		4.46	□□□□□ -1.7
KRI1	YNL308C	MYO4	P32492	1471 aa		4.46	□□□□□ -1.7
KRI1	YNL308C	FUR4	P05316	633 aa	Known RBP	4.45	□□□□□ -1.7
KRI1	YNL308C	RNA1	P11745	407 aa	Known RBP	4.45	□□□□□ -1.7
KRI1	YNL308C	ROX1	P25042	368 aa		4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms