RNA–Protein interactions for RNA: YNL248C

RPA49, Transcript of RNA polymerase I subunit A49, yeastyeast

Gene RPA49, Length 1,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA49YNL248C RPP0P05317 312 aaKnown RBP6.63□□□□□ -1.35
RPA49YNL248C KRE5P22023 1365 aa6.63□□□□□ -1.35
RPA49YNL248C VPS27P40343 622 aaKnown RBP6.63□□□□□ -1.35
RPA49YNL248C RRN7P40992 514 aa6.63□□□□□ -1.35
RPA49YNL248C FRK1Q03002 865 aaPredicted RBP6.63□□□□□ -1.35
RPA49YNL248C CFT1Q06632 1357 aaKnown RBP6.62□□□□□ -1.35
RPA49YNL248C FUN12P39730 1002 aaKnown RBP6.62□□□□□ -1.35
RPA49YNL248C RCM1P53972 490 aa6.62□□□□□ -1.35
RPA49YNL248C GCR2Q01722 534 aa6.62□□□□□ -1.35
RPA49YNL248C YDL144CQ07589 356 aa6.62□□□□□ -1.35
RPA49YNL248C BDP1P46678 594 aa6.61□□□□□ -1.35
RPA49YNL248C CDC4P07834 779 aa6.6□□□□□ -1.35
RPA49YNL248C PBS2P08018 668 aa6.6□□□□□ -1.35
RPA49YNL248C FPR3P38911 411 aaKnown RBP6.6□□□□□ -1.35
RPA49YNL248C KAR2P16474 682 aaKnown RBP6.59□□□□□ -1.35
RPA49YNL248C MAK10Q02197 733 aa6.59□□□□□ -1.35
RPA49YNL248C ERF2Q06551 359 aa6.59□□□□□ -1.35
RPA49YNL248C RVB2Q12464 471 aaKnown RBP6.59□□□□□ -1.35
RPA49YNL248C MLP1Q02455 1875 aaKnown RBP6.59□□□□□ -1.35
RPA49YNL248C YEF3P16521 1044 aaKnown RBP6.58□□□□□ -1.36
RPA49YNL248C GAR1P28007 205 aaKnown RBP6.58□□□□□ -1.36
RPA49YNL248C PAP2P53632 584 aaKnown RBP6.58□□□□□ -1.36
RPA49YNL248C LEU2P04173 364 aaPredicted RBP6.57□□□□□ -1.36
RPA49YNL248C KEX2P13134 814 aa6.57□□□□□ -1.36
RPA49YNL248C PAT1P25644 796 aaKnown RBP6.57□□□□□ -1.36
RPA49YNL248C PPH3P32345 308 aa6.57□□□□□ -1.36
RPA49YNL248C RTR1P40084 226 aaPredicted RBP6.57□□□□□ -1.36
RPA49YNL248C MPP10P47083 593 aaKnown RBP6.57□□□□□ -1.36
RPA49YNL248C RTF1P53064 558 aa6.57□□□□□ -1.36
RPA49YNL248C PDI1P17967 522 aaKnown RBP6.56□□□□□ -1.36
RPA49YNL248C IOC4Q04213 475 aa6.56□□□□□ -1.36
RPA49YNL248C PSK1P31374 1356 aa6.56□□□□□ -1.36
RPA49YNL248C HAP1P0CE41 1502 aa6.55□□□□□ -1.36
RPA49YNL248C YRB30P53107 440 aaPredicted RBP6.55□□□□□ -1.36
RPA49YNL248C HED1Q03937 162 aa6.55□□□□□ -1.36
RPA49YNL248C YML133CQ03099 1374 aa6.55□□□□□ -1.36
RPA49YNL248C YLL067CQ07888 1374 aa6.55□□□□□ -1.36
RPA49YNL248C YLL066CQ99208 1374 aa6.55□□□□□ -1.36
RPA49YNL248C SUI2P20459 304 aaKnown RBP6.54□□□□□ -1.36
RPA49YNL248C YNR029CP53729 429 aaKnown RBP6.54□□□□□ -1.36
RPA49YNL248C DNF3Q12674 1656 aa6.54□□□□□ -1.36
RPA49YNL248C CPS1P27614 576 aa6.53□□□□□ -1.36
RPA49YNL248C MTR4P47047 1073 aaKnown RBP6.53□□□□□ -1.36
RPA49YNL248C TAP42Q04372 366 aa6.53□□□□□ -1.36
RPA49YNL248C MAM3Q12296 706 aa6.53□□□□□ -1.36
RPA49YNL248C GBP2P25555 427 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
RPA49YNL248C MET22P32179 357 aa6.52□□□□□ -1.37
RPA49YNL248C CSE4P36012 229 aa6.52□□□□□ -1.37
RPA49YNL248C DSF2P38213 736 aa6.52□□□□□ -1.37
RPA49YNL248C HIM1Q06674 414 aa6.52□□□□□ -1.37
RPA49YNL248C TPD3P31383 635 aa6.51□□□□□ -1.37
RPA49YNL248C GRX4P32642 244 aa6.51□□□□□ -1.37
RPA49YNL248C PAC1P39946 494 aaKnown RBP6.51□□□□□ -1.37
RPA49YNL248C SAP155P43612 1002 aa6.51□□□□□ -1.37
RPA49YNL248C RAD2P07276 1031 aa6.5□□□□□ -1.37
RPA49YNL248C MOD5P07884 428 aa6.5□□□□□ -1.37
RPA49YNL248C RPC31P17890 251 aa6.5□□□□□ -1.37
RPA49YNL248C PSE1P32337 1089 aaKnown RBP6.5□□□□□ -1.37
RPA49YNL248C RRP46P53256 223 aaPredicted RBP6.5□□□□□ -1.37
RPA49YNL248C GAS4Q08271 471 aa6.5□□□□□ -1.37
RPA49YNL248C RPS24AP0CX31 135 aaKnown RBP6.49□□□□□ -1.37
RPA49YNL248C RPS24BP0CX32 135 aaKnown RBP6.49□□□□□ -1.37
RPA49YNL248C PRD1P25375 712 aa6.49□□□□□ -1.37
RPA49YNL248C AGE1Q04412 482 aa6.49□□□□□ -1.37
RPA49YNL248C SNF2P22082 1703 aa6.48□□□□□ -1.37
RPA49YNL248C IES2P40154 320 aa6.48□□□□□ -1.37
RPA49YNL248C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
RPA49YNL248C ENV9Q08651 330 aa6.48□□□□□ -1.37
RPA49YNL248C THI22Q06490 572 aa6.47□□□□□ -1.37
RPA49YNL248C MET32Q12041 191 aa6.47□□□□□ -1.37
RPA49YNL248C DAL5P15365 543 aa6.46□□□□□ -1.38
RPA49YNL248C CLB5P30283 435 aa6.46□□□□□ -1.38
RPA49YNL248C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
RPA49YNL248C BUD27P43573 796 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
RPA49YNL248C TUB4P53378 473 aa6.46□□□□□ -1.38
RPA49YNL248C ASH1P34233 588 aa6.45□□□□□ -1.38
RPA49YNL248C YMR196WQ04336 1088 aa6.45□□□□□ -1.38
RPA49YNL248C AUS1Q08409 1394 aa6.44□□□□□ -1.38
RPA49YNL248C SPB4P25808 606 aaPredicted RBP6.44□□□□□ -1.38
RPA49YNL248C PUS5Q06244 254 aa6.44□□□□□ -1.38
RPA49YNL248C RTT109Q07794 436 aa6.44□□□□□ -1.38
RPA49YNL248C RPO41P13433 1351 aaKnown RBP6.44□□□□□ -1.38
RPA49YNL248C AFT1P22149 690 aa6.43□□□□□ -1.38
RPA49YNL248C PRP43P53131 767 aaKnown RBP6.43□□□□□ -1.38
RPA49YNL248C YDR444WQ04093 687 aa6.43□□□□□ -1.38
RPA49YNL248C AKL1P38080 1108 aaKnown RBP6.42□□□□□ -1.38
RPA49YNL248C YIL092WP40497 633 aa6.42□□□□□ -1.38
RPA49YNL248C NUP42P49686 430 aaKnown RBP6.42□□□□□ -1.38
RPA49YNL248C HEF3P53978 1044 aaKnown RBP6.42□□□□□ -1.38
RPA49YNL248C TY1B-NL2Q99337 1749 aaKnown RBP6.42□□□□□ -1.38
RPA49YNL248C ADE6P38972 1358 aaKnown RBP6.41□□□□□ -1.38
RPA49YNL248C USO1P25386 1790 aa6.4□□□□□ -1.38
RPA49YNL248C THI12P42883 340 aa6.4□□□□□ -1.38
RPA49YNL248C THI5P43534 340 aa6.4□□□□□ -1.38
RPA49YNL248C YFR016CP43597 1233 aaKnown RBP6.4□□□□□ -1.38
RPA49YNL248C POL32P47110 350 aa6.4□□□□□ -1.38
RPA49YNL248C THI11P47183 340 aa6.4□□□□□ -1.38
RPA49YNL248C HST3P53687 447 aa6.4□□□□□ -1.38
RPA49YNL248C YNL115CP53925 644 aa6.4□□□□□ -1.38
RPA49YNL248C THI13Q07748 340 aa6.4□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms