RNA–Protein interactions for RNA: YNL172W

APC1, Transcript of Largest subunit of the Anaphase-Promoting Complex/Cyclosome, yeastyeast

Gene APC1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APC1YNL172W YRF1-8P0CX22 1796 aa5.3□□□□□ -1.56
APC1YNL172W SSK22P25390 1331 aaPredicted RBP5.3□□□□□ -1.56
APC1YNL172W GEF1P37020 779 aa5.3□□□□□ -1.56
APC1YNL172W ERO1Q03103 563 aa5.3□□□□□ -1.56
APC1YNL172W KEX1P09620 729 aa5.3□□□□□ -1.56
APC1YNL172W DOT5P40553 215 aa5.3□□□□□ -1.56
APC1YNL172W PUS6P53294 404 aa5.3□□□□□ -1.56
APC1YNL172W GCN2P15442 1659 aa5.3□□□□□ -1.56
APC1YNL172W AKL1P38080 1108 aaKnown RBP5.29□□□□□ -1.56
APC1YNL172W DSD1P53095 428 aa5.29□□□□□ -1.56
APC1YNL172W SSM4P40318 1319 aa5.29□□□□□ -1.56
APC1YNL172W SES1P07284 462 aaKnown RBP5.29□□□□□ -1.56
APC1YNL172W WHI3P34761 661 aaKnown RBP5.29□□□□□ -1.56
APC1YNL172W ALG2P43636 503 aa5.29□□□□□ -1.56
APC1YNL172W CTI6Q08923 506 aa5.29□□□□□ -1.56
APC1YNL172W TY1B-JR2P47100 1755 aaKnown RBP5.28□□□□□ -1.56
APC1YNL172W TY1B-ER2Q03619 1755 aa5.28□□□□□ -1.56
APC1YNL172W TY1B-MR1Q04214 1755 aa5.28□□□□□ -1.56
APC1YNL172W TY1B-MR2Q04670 1755 aaKnown RBP5.28□□□□□ -1.56
APC1YNL172W TY1B-LR1Q12088 1755 aaKnown RBP5.28□□□□□ -1.56
APC1YNL172W TY1B-NL1Q12112 1755 aa5.28□□□□□ -1.56
APC1YNL172W TY1B-GR1Q12141 1755 aa5.28□□□□□ -1.56
APC1YNL172W TY1B-BLQ12490 1755 aa5.28□□□□□ -1.56
APC1YNL172W RET1P22276 1149 aaKnown RBP5.28□□□□□ -1.56
APC1YNL172W APL2P36000 726 aaPredicted RBP5.28□□□□□ -1.56
APC1YNL172W SLN1P39928 1220 aaPredicted RBP5.28□□□□□ -1.56
APC1YNL172W SYF1Q04048 859 aaPredicted RBP5.28□□□□□ -1.56
APC1YNL172W DPH6Q12429 685 aa5.28□□□□□ -1.56
APC1YNL172W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
APC1YNL172W RCR1P38212 213 aa5.28□□□□□ -1.56
APC1YNL172W SEC7P11075 2009 aaKnown RBP5.28□□□□□ -1.56
APC1YNL172W SIT4P20604 311 aa5.28□□□□□ -1.56
APC1YNL172W MRD1Q06106 887 aaKnown RBP5.27□□□□□ -1.57
APC1YNL172W MET7Q08645 548 aa5.27□□□□□ -1.57
APC1YNL172W THS1P04801 734 aaKnown RBP5.27□□□□□ -1.57
APC1YNL172W GIN4Q12263 1142 aa5.27□□□□□ -1.57
APC1YNL172W CDC45Q08032 650 aa5.27□□□□□ -1.57
APC1YNL172W AUS1Q08409 1394 aa5.27□□□□□ -1.57
APC1YNL172W FOX2Q02207 900 aaKnown RBP5.26□□□□□ -1.57
APC1YNL172W TRM44Q02648 567 aaKnown RBP5.26□□□□□ -1.57
APC1YNL172W OSM1P21375 501 aaKnown RBP5.26□□□□□ -1.57
APC1YNL172W AFG2P32794 780 aa5.26□□□□□ -1.57
APC1YNL172W SPR3P41901 512 aa5.26□□□□□ -1.57
APC1YNL172W FMP30Q02883 468 aa5.26□□□□□ -1.57
APC1YNL172W YPR148CQ06523 435 aa5.26□□□□□ -1.57
APC1YNL172W YNL050CP53952 270 aa5.26□□□□□ -1.57
APC1YNL172W ERG12P07277 443 aa5.25□□□□□ -1.57
APC1YNL172W CST6P40535 587 aa5.25□□□□□ -1.57
APC1YNL172W YDR341CQ05506 607 aaKnown RBP5.25□□□□□ -1.57
APC1YNL172W ADR1P07248 1323 aa5.25□□□□□ -1.57
APC1YNL172W BDP1P46678 594 aa5.25□□□□□ -1.57
APC1YNL172W PSH1Q12161 406 aa5.25□□□□□ -1.57
APC1YNL172W YKR023WP36119 530 aaKnown RBP5.25□□□□□ -1.57
APC1YNL172W MDL2P33311 773 aa5.24□□□□□ -1.57
APC1YNL172W LSB1P53281 241 aa5.24□□□□□ -1.57
APC1YNL172W PAH1P32567 862 aa5.24□□□□□ -1.57
APC1YNL172W SEC8P32855 1065 aa5.24□□□□□ -1.57
APC1YNL172W CST9Q06032 482 aa5.24□□□□□ -1.57
APC1YNL172W ATG20Q07528 640 aa5.24□□□□□ -1.57
APC1YNL172W IOC3P43596 787 aa5.24□□□□□ -1.57
APC1YNL172W AFT1P22149 690 aa5.24□□□□□ -1.57
APC1YNL172W TOM71P38825 639 aaKnown RBP5.24□□□□□ -1.57
APC1YNL172W KRI1P42846 591 aaKnown RBP5.24□□□□□ -1.57
APC1YNL172W YGL082WP53155 381 aa5.24□□□□□ -1.57
APC1YNL172W PDR18P53756 1333 aa5.24□□□□□ -1.57
APC1YNL172W SAS3P34218 831 aa5.23□□□□□ -1.57
APC1YNL172W LDH1P38139 375 aa5.23□□□□□ -1.57
APC1YNL172W FKH1P40466 484 aa5.23□□□□□ -1.57
APC1YNL172W SGD1Q06132 899 aa5.23□□□□□ -1.57
APC1YNL172W OSH3P38713 996 aaKnown RBP5.23□□□□□ -1.57
APC1YNL172W RPP2BP02400 110 aaKnown RBP5.23□□□□□ -1.57
APC1YNL172W MRP7P12687 371 aa5.23□□□□□ -1.57
APC1YNL172W PEA2P40091 420 aa5.23□□□□□ -1.57
APC1YNL172W MSH4P40965 878 aaPredicted RBP5.23□□□□□ -1.57
APC1YNL172W PER1P25625 357 aa5.22□□□□□ -1.57
APC1YNL172W NAB3P38996 802 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
APC1YNL172W STM1P39015 273 aaKnown RBP5.22□□□□□ -1.57
APC1YNL172W LYS2P07702 1392 aa5.22□□□□□ -1.57
APC1YNL172W SPT2P06843 333 aaPredicted RBP5.22□□□□□ -1.57
APC1YNL172W MPH3P0CE00 602 aa5.22□□□□□ -1.57
APC1YNL172W VPS35P34110 944 aa5.22□□□□□ -1.57
APC1YNL172W OCT1P35999 772 aa5.22□□□□□ -1.57
APC1YNL172W NBL1Q3E7Y6 73 aa5.22□□□□□ -1.57
APC1YNL172W YKL023WP36103 277 aaKnown RBP5.22□□□□□ -1.57
APC1YNL172W NCS6P53088 359 aa5.22□□□□□ -1.57
APC1YNL172W RBA50Q04418 439 aa5.22□□□□□ -1.57
APC1YNL172W PPH3P32345 308 aa5.22□□□□□ -1.57
APC1YNL172W LYS4P49367 693 aaPredicted RBP5.22□□□□□ -1.57
APC1YNL172W MMF1P40185 145 aaKnown RBP5.21□□□□□ -1.57
APC1YNL172W ISW2Q08773 1120 aa5.21□□□□□ -1.57
APC1YNL172W TY1B-AO13527 1196 aaKnown RBP5.21□□□□□ -1.58
APC1YNL172W ALT2P52892 507 aa5.21□□□□□ -1.58
APC1YNL172W ALE1Q08548 619 aa5.21□□□□□ -1.58
APC1YNL172W SRS2P12954 1174 aa5.21□□□□□ -1.58
APC1YNL172W APL6P46682 809 aa5.21□□□□□ -1.58
APC1YNL172W CDC19P00549 500 aaKnown RBP5.21□□□□□ -1.58
APC1YNL172W SDH2P21801 266 aa5.21□□□□□ -1.58
APC1YNL172W TIM23P32897 222 aa5.21□□□□□ -1.58
APC1YNL172W RTG3P38165 486 aa5.21□□□□□ -1.58
APC1YNL172W SUB2Q07478 446 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms