RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W NUP42P49686 430 aaKnown RBP5.45□□□□□ -1.54
PUB1YNL016W PUS1Q12211 544 aaKnown RBP5.45□□□□□ -1.54
PUB1YNL016W TOP1P04786 769 aa5.44□□□□□ -1.54
PUB1YNL016W PAT1P25644 796 aaKnown RBP5.44□□□□□ -1.54
PUB1YNL016W IES2P40154 320 aa5.44□□□□□ -1.54
PUB1YNL016W DIT2P21595 489 aa5.43□□□□□ -1.54
PUB1YNL016W SNU71P53207 620 aaKnown RBP5.43□□□□□ -1.54
PUB1YNL016W GAP1P19145 602 aaPredicted RBP5.42□□□□□ -1.54
PUB1YNL016W TFB3Q03290 321 aa5.42□□□□□ -1.54
PUB1YNL016W TFB4Q12004 338 aa5.42□□□□□ -1.54
PUB1YNL016W PAM1P37304 830 aaKnown RBP5.42□□□□□ -1.54
PUB1YNL016W CAT8P39113 1433 aa5.41□□□□□ -1.54
PUB1YNL016W SLD2P34252 453 aa5.4□□□□□ -1.55
PUB1YNL016W YBT1P32386 1661 aa5.39□□□□□ -1.55
PUB1YNL016W YIR007WP40566 764 aa5.39□□□□□ -1.55
PUB1YNL016W REF2P42073 533 aaPredicted RBP5.39□□□□□ -1.55
PUB1YNL016W URN1Q06525 465 aaKnown RBP5.39□□□□□ -1.55
PUB1YNL016W CSC1Q06538 782 aa5.39□□□□□ -1.55
PUB1YNL016W OPT2Q06593 877 aa5.39□□□□□ -1.55
PUB1YNL016W SSA4P22202 642 aaKnown RBP5.38□□□□□ -1.55
PUB1YNL016W BRL1P38770 471 aa5.37□□□□□ -1.55
PUB1YNL016W THI12P42883 340 aa5.37□□□□□ -1.55
PUB1YNL016W THI5P43534 340 aa5.37□□□□□ -1.55
PUB1YNL016W THI11P47183 340 aa5.37□□□□□ -1.55
PUB1YNL016W PUS5Q06244 254 aa5.37□□□□□ -1.55
PUB1YNL016W THI13Q07748 340 aa5.37□□□□□ -1.55
PUB1YNL016W IML1P47170 1584 aa5.36□□□□□ -1.55
PUB1YNL016W ATF2P53296 535 aa5.36□□□□□ -1.55
PUB1YNL016W YPR204WQ08995 1032 aa5.36□□□□□ -1.55
PUB1YNL016W GEA1P47102 1408 aaPredicted RBP5.35□□□□□ -1.55
PUB1YNL016W PKC1P24583 1151 aa5.35□□□□□ -1.55
PUB1YNL016W GLN1P32288 370 aaKnown RBP5.35□□□□□ -1.55
PUB1YNL016W TY1B-NL2Q99337 1749 aaKnown RBP5.35□□□□□ -1.55
PUB1YNL016W NUP188P52593 1655 aaKnown RBP5.34□□□□□ -1.55
PUB1YNL016W RRN6P32786 894 aa5.34□□□□□ -1.55
PUB1YNL016W BIM1P40013 344 aa5.34□□□□□ -1.55
PUB1YNL016W SEN54Q02825 467 aaPredicted RBP5.34□□□□□ -1.55
PUB1YNL016W YMR196WQ04336 1088 aa5.34□□□□□ -1.55
PUB1YNL016W HAP1P0CE41 1502 aa5.33□□□□□ -1.56
PUB1YNL016W HEM3P28789 327 aa5.33□□□□□ -1.56
PUB1YNL016W SSF1P38789 453 aaPredicted RBP5.33□□□□□ -1.56
PUB1YNL016W DOS2P54858 310 aa5.33□□□□□ -1.56
PUB1YNL016W MOD5P07884 428 aa5.32□□□□□ -1.56
PUB1YNL016W CDC3P32457 520 aaKnown RBP5.32□□□□□ -1.56
PUB1YNL016W ATG32P40458 529 aa5.32□□□□□ -1.56
PUB1YNL016W MSB3P48566 633 aaPredicted RBP5.32□□□□□ -1.56
PUB1YNL016W YLR346CQ06139 101 aa5.32□□□□□ -1.56
PUB1YNL016W COX6P00427 148 aa5.31□□□□□ -1.56
PUB1YNL016W SSA2P10592 639 aaKnown RBP5.31□□□□□ -1.56
PUB1YNL016W BRN1P38170 754 aa5.3□□□□□ -1.56
PUB1YNL016W OCA5P38738 679 aa5.3□□□□□ -1.56
PUB1YNL016W YRB30P53107 440 aaPredicted RBP5.3□□□□□ -1.56
PUB1YNL016W VMR1P38735 1592 aa5.3□□□□□ -1.56
PUB1YNL016W FAR11P53917 953 aa5.29□□□□□ -1.56
PUB1YNL016W YDR090CQ03193 310 aa5.29□□□□□ -1.56
PUB1YNL016W PHM7Q12252 991 aa5.29□□□□□ -1.56
PUB1YNL016W SPC42P36094 363 aa5.29□□□□□ -1.56
PUB1YNL016W KIC1P38692 1080 aa5.29□□□□□ -1.56
PUB1YNL016W IPL1P38991 367 aa5.29□□□□□ -1.56
PUB1YNL016W YJL007CP47080 104 aa5.29□□□□□ -1.56
PUB1YNL016W TTI1P36097 1038 aa5.28□□□□□ -1.56
PUB1YNL016W GLY1P37303 387 aaKnown RBP5.28□□□□□ -1.56
PUB1YNL016W PAC1P39946 494 aaKnown RBP5.28□□□□□ -1.56
PUB1YNL016W CPS1P27614 576 aa5.27□□□□□ -1.57
PUB1YNL016W PTK2P47116 818 aaKnown RBP5.27□□□□□ -1.57
PUB1YNL016W RPL34AP87262 121 aaPredicted RBP5.27□□□□□ -1.57
PUB1YNL016W NOB1Q08444 459 aaKnown RBP5.27□□□□□ -1.57
PUB1YNL016W TIF1P10081 395 aaKnown RBP5.26□□□□□ -1.57
PUB1YNL016W MDJ1P35191 511 aa5.26□□□□□ -1.57
PUB1YNL016W SCW11P53189 542 aa5.26□□□□□ -1.57
PUB1YNL016W TYS1P36421 394 aaKnown RBP5.25□□□□□ -1.57
PUB1YNL016W RPL34BP40525 121 aaKnown RBP5.25□□□□□ -1.57
PUB1YNL016W ATG36P46983 293 aa5.25□□□□□ -1.57
PUB1YNL016W CSN12P47130 423 aa5.25□□□□□ -1.57
PUB1YNL016W ASF1P32447 279 aa5.24□□□□□ -1.57
PUB1YNL016W APP1P53933 587 aa5.24□□□□□ -1.57
PUB1YNL016W TY1A-BLQ12266 440 aa5.24□□□□□ -1.57
PUB1YNL016W SRF1Q12516 437 aa5.24□□□□□ -1.57
PUB1YNL016W SRB8P25648 1427 aa5.24□□□□□ -1.57
PUB1YNL016W FPR4Q06205 392 aaPredicted RBP5.23□□□□□ -1.57
PUB1YNL016W ERF2Q06551 359 aa5.23□□□□□ -1.57
PUB1YNL016W KEX2P13134 814 aa5.22□□□□□ -1.57
PUB1YNL016W UGA3P26370 528 aa5.22□□□□□ -1.57
PUB1YNL016W NUG1P40010 520 aaKnown RBP5.22□□□□□ -1.57
PUB1YNL016W SWE1P32944 819 aa5.21□□□□□ -1.58
PUB1YNL016W BIO2P32451 375 aa5.2□□□□□ -1.58
PUB1YNL016W ORC6P38826 435 aa5.2□□□□□ -1.58
PUB1YNL016W TYW1Q08960 810 aaKnown RBP5.2□□□□□ -1.58
PUB1YNL016W HAT1Q12341 374 aa5.2□□□□□ -1.58
PUB1YNL016W PDR5P33302 1511 aaKnown RBP5.19□□□□□ -1.58
PUB1YNL016W MIP1P15801 1254 aa5.19□□□□□ -1.58
PUB1YNL016W KTR1P27810 393 aaKnown RBP5.19□□□□□ -1.58
PUB1YNL016W PSE1P32337 1089 aaKnown RBP5.19□□□□□ -1.58
PUB1YNL016W NMD2P38798 1089 aaKnown RBP5.19□□□□□ -1.58
PUB1YNL016W STM1P39015 273 aaKnown RBP5.19□□□□□ -1.58
PUB1YNL016W YAF9P53930 226 aa5.19□□□□□ -1.58
PUB1YNL016W BCK1Q01389 1478 aa5.19□□□□□ -1.58
PUB1YNL016W PUP1P25043 261 aa5.18□□□□□ -1.58
PUB1YNL016W YBL036CP38197 257 aa5.18□□□□□ -1.58
PUB1YNL016W DPH6Q12429 685 aa5.18□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms