RNA–Protein interactions for RNA: YMR314W

PRE5, Transcript of Alpha 6 subunit of the 20S proteasome, yeastyeast

Gene PRE5, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE5YMR314W RPN1P38764 993 aaKnown RBP9.86□□□□□ -0.83
PRE5YMR314W SAS4Q04003 481 aa9.86□□□□□ -0.83
PRE5YMR314W TAO3P40468 2376 aa9.85□□□□□ -0.83
PRE5YMR314W HVG1P0CE11 249 aa9.85□□□□□ -0.83
PRE5YMR314W YGR117CP53270 476 aa9.85□□□□□ -0.83
PRE5YMR314W VPS13Q07878 3144 aa9.85□□□□□ -0.83
PRE5YMR314W FRD1P32614 470 aaKnown RBP9.84□□□□□ -0.83
PRE5YMR314W SYF1Q04048 859 aaPredicted RBP9.84□□□□□ -0.83
PRE5YMR314W YPR117WQ06116 2489 aa9.84□□□□□ -0.83
PRE5YMR314W SSK22P25390 1331 aaPredicted RBP9.83□□□□□ -0.84
PRE5YMR314W TRM44Q02648 567 aaKnown RBP9.83□□□□□ -0.84
PRE5YMR314W ARG8P18544 423 aa9.82□□□□□ -0.84
PRE5YMR314W PAP2P53632 584 aaKnown RBP9.82□□□□□ -0.84
PRE5YMR314W NTH2P35172 780 aa9.81□□□□□ -0.84
PRE5YMR314W CST9Q06032 482 aa9.81□□□□□ -0.84
PRE5YMR314W HAT1Q12341 374 aa9.81□□□□□ -0.84
PRE5YMR314W DCD1P06773 312 aa9.8□□□□□ -0.84
PRE5YMR314W VPS4P52917 437 aa9.8□□□□□ -0.84
PRE5YMR314W UGA3P26370 528 aa9.79□□□□□ -0.84
PRE5YMR314W CSR2Q12734 1121 aa9.79□□□□□ -0.84
PRE5YMR314W HPR1P17629 752 aaKnown RBP9.78□□□□□ -0.84
PRE5YMR314W TIF4632P39936 914 aaKnown RBP9.78□□□□□ -0.84
PRE5YMR314W CRF1Q04930 467 aa9.78□□□□□ -0.84
PRE5YMR314W PCS60P38137 543 aaKnown RBP RIP-Chip data9.77□□□□□ -0.85 RIP-Chip
PRE5YMR314W RRT6P53117 311 aaPredicted RBP9.77□□□□□ -0.85
PRE5YMR314W MOT2P34909 587 aaKnown RBP9.76□□□□□ -0.85
PRE5YMR314W PAM1P37304 830 aaKnown RBP9.76□□□□□ -0.85
PRE5YMR314W RSC30P38781 883 aa9.76□□□□□ -0.85
PRE5YMR314W YPR204WQ08995 1032 aa9.76□□□□□ -0.85
PRE5YMR314W STV1P37296 890 aa9.75□□□□□ -0.85
PRE5YMR314W SET4P42948 560 aa9.75□□□□□ -0.85
PRE5YMR314W AFG2P32794 780 aa9.74□□□□□ -0.85
PRE5YMR314W APE3P37302 537 aaKnown RBP9.74□□□□□ -0.85
PRE5YMR314W PDS5Q04264 1277 aa9.74□□□□□ -0.85
PRE5YMR314W NSE3Q05541 303 aa9.74□□□□□ -0.85
PRE5YMR314W LYS2P07702 1392 aa9.74□□□□□ -0.85
PRE5YMR314W MAL31P38156 614 aa9.73□□□□□ -0.85
PRE5YMR314W RRG1Q12167 365 aaPredicted RBP9.73□□□□□ -0.85
PRE5YMR314W APL2P36000 726 aaPredicted RBP9.72□□□□□ -0.85
PRE5YMR314W PNT1P38969 423 aa9.72□□□□□ -0.85
PRE5YMR314W GAS5Q08193 484 aa9.71□□□□□ -0.86
PRE5YMR314W NSR1P27476 414 aaKnown RBP RIP-Chip data9.7□□□□□ -0.86not detected
PRE5YMR314W UBX2Q04228 584 aa9.7□□□□□ -0.86
PRE5YMR314W RBA50Q04418 439 aa9.69□□□□□ -0.86
PRE5YMR314W KRE2P27809 442 aa9.68□□□□□ -0.86
PRE5YMR314W TRK1P12685 1235 aa9.67□□□□□ -0.86
PRE5YMR314W YNL050CP53952 270 aa9.67□□□□□ -0.86
PRE5YMR314W SEN54Q02825 467 aaPredicted RBP9.67□□□□□ -0.86
PRE5YMR314W TRP5P00931 707 aaKnown RBP9.66□□□□□ -0.86
PRE5YMR314W CBP1P07252 654 aa9.66□□□□□ -0.86
PRE5YMR314W VPS64Q03944 604 aa9.66□□□□□ -0.86
PRE5YMR314W YLR271WQ06152 274 aa9.66□□□□□ -0.86
PRE5YMR314W DPH6Q12429 685 aa9.66□□□□□ -0.86
PRE5YMR314W FLO11P08640 1367 aa9.63□□□□□ -0.87
PRE5YMR314W ICP55P40051 511 aa9.62□□□□□ -0.87
PRE5YMR314W PKH1Q03407 766 aa9.62□□□□□ -0.87
PRE5YMR314W ZDS2P54786 942 aa9.61□□□□□ -0.87
PRE5YMR314W SGD1Q06132 899 aa9.61□□□□□ -0.87
PRE5YMR314W YVH1Q02256 364 aaKnown RBP9.6□□□□□ -0.87
PRE5YMR314W PRP42Q03776 544 aaKnown RBP9.6□□□□□ -0.87
PRE5YMR314W YLR225CQ05948 407 aaKnown RBP9.6□□□□□ -0.87
PRE5YMR314W SPL2P38839 148 aa9.59□□□□□ -0.87
PRE5YMR314W GSM1P42950 618 aa9.59□□□□□ -0.87
PRE5YMR314W ASH1P34233 588 aa9.58□□□□□ -0.88
PRE5YMR314W UTP7P40055 554 aaKnown RBP9.58□□□□□ -0.88
PRE5YMR314W ZDS1P50111 915 aaKnown RBP9.58□□□□□ -0.88
PRE5YMR314W PSD2P53037 1138 aaKnown RBP9.58□□□□□ -0.88
PRE5YMR314W RRP46P53256 223 aaPredicted RBP9.58□□□□□ -0.88
PRE5YMR314W RPT4P53549 437 aaKnown RBP9.58□□□□□ -0.88
PRE5YMR314W JIP4Q03361 876 aa9.58□□□□□ -0.88
PRE5YMR314W FBP1P09201 348 aa9.57□□□□□ -0.88
PRE5YMR314W GAL2P13181 574 aa9.57□□□□□ -0.88
PRE5YMR314W PAH1P32567 862 aa9.57□□□□□ -0.88
PRE5YMR314W NIT1P40447 199 aa9.57□□□□□ -0.88
PRE5YMR314W FCP1Q03254 732 aa9.57□□□□□ -0.88
PRE5YMR314W COQ4O13525 335 aa9.56□□□□□ -0.88
PRE5YMR314W POL5P39985 1022 aaKnown RBP9.56□□□□□ -0.88
PRE5YMR314W MAM1P40065 302 aa9.56□□□□□ -0.88
PRE5YMR314W SPR3P41901 512 aa9.56□□□□□ -0.88
PRE5YMR314W MTC3P53077 123 aa9.56□□□□□ -0.88
PRE5YMR314W BMS1Q08965 1183 aaKnown RBP9.56□□□□□ -0.88
PRE5YMR314W SAC3P46674 1301 aa9.55□□□□□ -0.88
PRE5YMR314W CLA4P48562 842 aa9.54□□□□□ -0.88
PRE5YMR314W DNM1P54861 757 aa9.54□□□□□ -0.88
PRE5YMR314W ACK1Q07622 623 aaPredicted RBP9.54□□□□□ -0.88
PRE5YMR314W ARG82P07250 355 aa9.53□□□□□ -0.88
PRE5YMR314W RPS7AP26786 190 aaKnown RBP9.53□□□□□ -0.88
PRE5YMR314W MGM1P32266 881 aa9.53□□□□□ -0.88
PRE5YMR314W YOL057WQ08225 711 aa9.53□□□□□ -0.88
PRE5YMR314W THI3Q07471 609 aa9.52□□□□□ -0.89
PRE5YMR314W SWI1P09547 1314 aa9.52□□□□□ -0.89
PRE5YMR314W DUR1,2P32528 1835 aaKnown RBP9.52□□□□□ -0.89
PRE5YMR314W YJL171CP46992 396 aa9.51□□□□□ -0.89
PRE5YMR314W ULP1Q02724 621 aa9.51□□□□□ -0.89
PRE5YMR314W NGR1P32831 672 aaKnown RBP9.5□□□□□ -0.89
PRE5YMR314W PSF2P40359 213 aa9.5□□□□□ -0.89
PRE5YMR314W YJR008WP47085 338 aa9.5□□□□□ -0.89
PRE5YMR314W TOS4Q06266 489 aa9.5□□□□□ -0.89
PRE5YMR314W GIN4Q12263 1142 aa9.5□□□□□ -0.89
PRE5YMR314W PRD1P25375 712 aa9.49□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms