RNA–Protein interactions for RNA: YLR121C

YPS3, Transcript of Aspartic protease, yeast

Gene YPS3, Length 1,527 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPS3	YLR121C	DJP1	P40564	432 aa		10.87	□□□□□ -0.67
YPS3	YLR121C	HXT17	P53631	564 aa		10.87	□□□□□ -0.67
YPS3	YLR121C	MDG1	P53885	366 aa		10.87	□□□□□ -0.67
YPS3	YLR121C	FCP1	Q03254	732 aa		10.87	□□□□□ -0.67
YPS3	YLR121C	RMD1	Q03441	430 aa		10.87	□□□□□ -0.67
YPS3	YLR121C	SSF1	P38789	453 aa	Predicted RBP	10.86	□□□□□ -0.67
YPS3	YLR121C	ITC1	P53125	1264 aa		10.86	□□□□□ -0.67
YPS3	YLR121C	LAM6	Q08001	693 aa		10.86	□□□□□ -0.67
YPS3	YLR121C	PDR18	P53756	1333 aa		10.85	□□□□□ -0.67
YPS3	YLR121C	NOT3	P06102	836 aa	Known RBP	10.85	□□□□□ -0.67
YPS3	YLR121C	VPS24	P36095	224 aa	Known RBP	10.85	□□□□□ -0.67
YPS3	YLR121C	ECM21	P38167	1117 aa	Known RBP	10.85	□□□□□ -0.67
YPS3	YLR121C	TEA1	P47988	759 aa		10.85	□□□□□ -0.67
YPS3	YLR121C	YGL082W	P53155	381 aa		10.85	□□□□□ -0.67
YPS3	YLR121C	PSH1	Q12161	406 aa		10.85	□□□□□ -0.67
YPS3	YLR121C	CLC1	P17891	233 aa		10.84	□□□□□ -0.67
YPS3	YLR121C	SNF7	P39929	240 aa	Known RBP	10.84	□□□□□ -0.67
YPS3	YLR121C	SRS2	P12954	1174 aa		10.84	□□□□□ -0.67
YPS3	YLR121C	SLA1	P32790	1244 aa		10.84	□□□□□ -0.67
YPS3	YLR121C	SER1	P33330	395 aa	Known RBP	10.83	□□□□□ -0.68
YPS3	YLR121C	RPN11	P43588	306 aa	Known RBP	10.83	□□□□□ -0.68
YPS3	YLR121C	LSP1	Q12230	341 aa	Known RBP	10.83	□□□□□ -0.68
YPS3	YLR121C	KTR3	P38130	404 aa	Predicted RBP	10.82	□□□□□ -0.68
YPS3	YLR121C	YGL242C	P53066	181 aa		10.82	□□□□□ -0.68
YPS3	YLR121C	MLC1	P53141	149 aa		10.82	□□□□□ -0.68
YPS3	YLR121C	ROX1	P25042	368 aa		10.81	□□□□□ -0.68
YPS3	YLR121C	PRP40	P33203	583 aa	Known RBP	10.81	□□□□□ -0.68
YPS3	YLR121C	ALO1	P54783	526 aa	Known RBP	10.81	□□□□□ -0.68
YPS3	YLR121C	RIM20	Q12033	661 aa		10.81	□□□□□ -0.68
YPS3	YLR121C	MRPS35	P53292	345 aa		10.8	□□□□□ -0.68
YPS3	YLR121C	BRE1	Q07457	700 aa	Known RBP	10.8	□□□□□ -0.68
YPS3	YLR121C	GRE2	Q12068	342 aa	Known RBP	10.8	□□□□□ -0.68
YPS3	YLR121C	MSB4	Q12317	492 aa		10.8	□□□□□ -0.68
YPS3	YLR121C	YJL181W	P46987	611 aa		10.79	□□□□□ -0.68
YPS3	YLR121C	MTC5	Q03897	1148 aa		10.79	□□□□□ -0.68
YPS3	YLR121C	FPR4	Q06205	392 aa	Predicted RBP	10.79	□□□□□ -0.68
YPS3	YLR121C	NYV1	Q12255	253 aa		10.79	□□□□□ -0.68
YPS3	YLR121C	TRL1	P09880	827 aa	Known RBP	10.79	□□□□□ -0.68
YPS3	YLR121C	AAP1	P37898	856 aa	Known RBP	10.79	□□□□□ -0.68
YPS3	YLR121C	SUP35	P05453	685 aa	Known RBP	10.78	□□□□□ -0.68
YPS3	YLR121C	RNR2	P09938	399 aa	Known RBP	10.78	□□□□□ -0.68
YPS3	YLR121C	MSP1	P28737	362 aa		10.78	□□□□□ -0.68
YPS3	YLR121C	GYP5	Q12344	894 aa		10.78	□□□□□ -0.68
YPS3	YLR121C	SSK22	P25390	1331 aa	Predicted RBP	10.77	□□□□□ -0.68
YPS3	YLR121C	NPR2	P39923	615 aa		10.77	□□□□□ -0.69
YPS3	YLR121C	AI2	P03876	854 aa		10.76	□□□□□ -0.69
YPS3	YLR121C	PIB2	P53191	635 aa		10.76	□□□□□ -0.69
YPS3	YLR121C	UBP16	Q02863	499 aa		10.76	□□□□□ -0.69
YPS3	YLR121C	SNU66	Q12420	587 aa	Predicted RBP	10.76	□□□□□ -0.69
YPS3	YLR121C	NPA3	P47122	385 aa		10.75	□□□□□ -0.69
YPS3	YLR121C	VPS20	Q04272	221 aa		10.75	□□□□□ -0.69
YPS3	YLR121C	SEC18	P18759	758 aa	Known RBP	10.74	□□□□□ -0.69
YPS3	YLR121C	KTR1	P27810	393 aa	Known RBP	10.74	□□□□□ -0.69
YPS3	YLR121C	SAC3	P46674	1301 aa		10.73	□□□□□ -0.69
YPS3	YLR121C	KRI1	P42846	591 aa	Known RBP	10.73	□□□□□ -0.69
YPS3	YLR121C	RPN7	Q06103	429 aa	Known RBP	10.73	□□□□□ -0.69
YPS3	YLR121C	EPS1	P40557	701 aa		10.72	□□□□□ -0.69
YPS3	YLR121C	HAT1	Q12341	374 aa		10.72	□□□□□ -0.69
YPS3	YLR121C	STM1	P39015	273 aa	Known RBP	10.71	□□□□□ -0.69
YPS3	YLR121C	SLN1	P39928	1220 aa	Predicted RBP	10.71	□□□□□ -0.69
YPS3	YLR121C	YNL193W	P53870	558 aa		10.71	□□□□□ -0.69
YPS3	YLR121C	YMR074C	Q04773	145 aa		10.71	□□□□□ -0.69
YPS3	YLR121C	ARL1	P38116	183 aa	Known RBP	10.7	□□□□□ -0.7
YPS3	YLR121C	AIM9	P40053	627 aa	Known RBP	10.7	□□□□□ -0.7
YPS3	YLR121C	YGL081W	P53156	320 aa		10.7	□□□□□ -0.7
YPS3	YLR121C	PBY1	P38254	753 aa		10.69	□□□□□ -0.7
YPS3	YLR121C	BUG1	Q12191	341 aa		10.68	□□□□□ -0.7
YPS3	YLR121C	ADR1	P07248	1323 aa		10.68	□□□□□ -0.7
YPS3	YLR121C	BDH2	P39713	417 aa		10.68	□□□□□ -0.7
YPS3	YLR121C	CWH41	P53008	833 aa		10.68	□□□□□ -0.7
YPS3	YLR121C	HAP5	Q02516	242 aa		10.68	□□□□□ -0.7
YPS3	YLR121C	CTI6	Q08923	506 aa		10.68	□□□□□ -0.7
YPS3	YLR121C	LYS4	P49367	693 aa	Predicted RBP	10.67	□□□□□ -0.7
YPS3	YLR121C	HRQ1	Q05549	1077 aa		10.67	□□□□□ -0.7
YPS3	YLR121C	BIK1	P11709	440 aa		10.66	□□□□□ -0.7
YPS3	YLR121C	UBP1	P25037	809 aa		10.66	□□□□□ -0.7
YPS3	YLR121C	RAT1	Q02792	1006 aa	Known RBP	10.66	□□□□□ -0.7
YPS3	YLR121C	RRI2	Q12348	645 aa		10.66	□□□□□ -0.7
YPS3	YLR121C	COG8	Q04632	607 aa		10.65	□□□□□ -0.7
YPS3	YLR121C	DIP2	Q12220	943 aa	Predicted RBP	10.65	□□□□□ -0.7
YPS3	YLR121C	POM152	P39685	1337 aa		10.64	□□□□□ -0.71
YPS3	YLR121C	TPM1	P17536	199 aa	Known RBP	10.64	□□□□□ -0.71
YPS3	YLR121C	GLN1	P32288	370 aa	Known RBP	10.64	□□□□□ -0.71
YPS3	YLR121C	KNS1	P32350	737 aa	Predicted RBP	10.64	□□□□□ -0.71
YPS3	YLR121C	NGR1	P32831	672 aa	Known RBP	10.64	□□□□□ -0.71
YPS3	YLR121C	OSH3	P38713	996 aa	Known RBP	10.64	□□□□□ -0.71
YPS3	YLR121C	YMR147W	P40218	223 aa	Known RBP	10.64	□□□□□ -0.71
YPS3	YLR121C	SPO22	P40511	975 aa		10.64	□□□□□ -0.71
YPS3	YLR121C	HST1	P53685	503 aa		10.64	□□□□□ -0.71
YPS3	YLR121C	PGA3	Q12746	312 aa	Known RBP	10.64	□□□□□ -0.71
YPS3	YLR121C	BUD31	P25337	157 aa	Predicted RBP	10.63	□□□□□ -0.71
YPS3	YLR121C	UTP22	P53254	1237 aa	Predicted RBP	10.63	□□□□□ -0.71
YPS3	YLR121C	TSR3	Q12094	313 aa	Known RBP	10.63	□□□□□ -0.71
YPS3	YLR121C	PMD1	P32634	1753 aa		10.63	□□□□□ -0.71
YPS3	YLR121C	RPL19A	P0CX82	189 aa	Known RBP	10.63	□□□□□ -0.71
YPS3	YLR121C	RPL19B	P0CX83	189 aa	Predicted RBP	10.63	□□□□□ -0.71
YPS3	YLR121C	OPI1	P21957	404 aa		10.63	□□□□□ -0.71
YPS3	YLR121C	CIC1	P38779	376 aa	Known RBP	10.63	□□□□□ -0.71
YPS3	YLR121C	HAL5	P38970	855 aa	Known RBP	10.63	□□□□□ -0.71
YPS3	YLR121C	CIR1	P42940	261 aa		10.63	□□□□□ -0.71

Retrieved 100 of 5,963 RNA–protein pairs in 66.4 ms