RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeastyeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLF1YLR117C PSO2P30620 661 aa5.47□□□□□ -1.53
CLF1YLR117C DPH5P32469 300 aaPredicted RBP5.47□□□□□ -1.53
CLF1YLR117C OLA1P38219 394 aaKnown RBP5.47□□□□□ -1.53
CLF1YLR117C RFC1P38630 861 aaKnown RBP5.47□□□□□ -1.53
CLF1YLR117C YMR124WP39523 943 aaKnown RBP5.47□□□□□ -1.53
CLF1YLR117C PRP31P49704 494 aaPredicted RBP5.47□□□□□ -1.53
CLF1YLR117C YGL081WP53156 320 aa5.47□□□□□ -1.53
CLF1YLR117C BNR1P40450 1375 aa5.46□□□□□ -1.53
CLF1YLR117C TY1B-AO13527 1196 aaKnown RBP5.46□□□□□ -1.53
CLF1YLR117C KEX1P09620 729 aa5.46□□□□□ -1.53
CLF1YLR117C MRPL10P36520 322 aa5.46□□□□□ -1.53
CLF1YLR117C VID30P53076 958 aa5.46□□□□□ -1.53
CLF1YLR117C YGL082WP53155 381 aa5.46□□□□□ -1.53
CLF1YLR117C SNU71P53207 620 aaKnown RBP5.46□□□□□ -1.53
CLF1YLR117C DNM1P54861 757 aa5.46□□□□□ -1.53
CLF1YLR117C YPL225WQ08971 146 aaKnown RBP5.46□□□□□ -1.53
CLF1YLR117C PSK1P31374 1356 aa5.46□□□□□ -1.54
CLF1YLR117C BNI1P41832 1953 aa5.46□□□□□ -1.54
CLF1YLR117C HSP104P31539 908 aaKnown RBP5.46□□□□□ -1.54
CLF1YLR117C DSF2P38213 736 aa5.46□□□□□ -1.54
CLF1YLR117C IAH1P41734 238 aa5.46□□□□□ -1.54
CLF1YLR117C GYL1Q04322 720 aa5.46□□□□□ -1.54
CLF1YLR117C TRK1P12685 1235 aa5.45□□□□□ -1.54
CLF1YLR117C SAP1P39955 897 aaKnown RBP5.45□□□□□ -1.54
CLF1YLR117C PEA2P40091 420 aa5.45□□□□□ -1.54
CLF1YLR117C MVP1P40959 511 aaKnown RBP5.45□□□□□ -1.54
CLF1YLR117C SAP155P43612 1002 aa5.45□□□□□ -1.54
CLF1YLR117C CWH41P53008 833 aa5.45□□□□□ -1.54
CLF1YLR117C PUF6Q04373 656 aaKnown RBP5.45□□□□□ -1.54
CLF1YLR117C HRQ1Q05549 1077 aa5.45□□□□□ -1.54
CLF1YLR117C NFI1Q12216 726 aa5.45□□□□□ -1.54
CLF1YLR117C NHA1Q99271 985 aa5.45□□□□□ -1.54
CLF1YLR117C YOR093CQ12275 1648 aa5.45□□□□□ -1.54
CLF1YLR117C OXP1P28273 1286 aa5.44□□□□□ -1.54
CLF1YLR117C HOS4P40480 1083 aa5.44□□□□□ -1.54
CLF1YLR117C HYR1P40581 163 aaKnown RBP5.44□□□□□ -1.54
CLF1YLR117C APC11Q12157 165 aa5.44□□□□□ -1.54
CLF1YLR117C GIN4Q12263 1142 aa5.44□□□□□ -1.54
CLF1YLR117C MSB4Q12317 492 aa5.44□□□□□ -1.54
CLF1YLR117C RAD50P12753 1312 aa5.44□□□□□ -1.54
CLF1YLR117C DID4P36108 232 aa5.44□□□□□ -1.54
CLF1YLR117C TPS3P38426 1054 aaKnown RBP5.44□□□□□ -1.54
CLF1YLR117C YIL055CP40523 627 aaKnown RBP5.44□□□□□ -1.54
CLF1YLR117C VPS20Q04272 221 aa5.44□□□□□ -1.54
CLF1YLR117C YOR389WQ08912 624 aa5.44□□□□□ -1.54
CLF1YLR117C HIF1Q12373 385 aa5.44□□□□□ -1.54
CLF1YLR117C DLD1P32891 587 aa5.43□□□□□ -1.54
CLF1YLR117C SIT1P39980 628 aa5.43□□□□□ -1.54
CLF1YLR117C SSL2Q00578 843 aa5.43□□□□□ -1.54
CLF1YLR117C SSA1P10591 642 aaKnown RBP5.43□□□□□ -1.54
CLF1YLR117C SSA2P10592 639 aaKnown RBP5.43□□□□□ -1.54
CLF1YLR117C TAF13P11747 167 aa5.43□□□□□ -1.54
CLF1YLR117C SLD2P34252 453 aa5.43□□□□□ -1.54
CLF1YLR117C TAF5P38129 798 aa5.43□□□□□ -1.54
CLF1YLR117C PTP3P40048 928 aa5.43□□□□□ -1.54
CLF1YLR117C LEM3P42838 414 aa5.43□□□□□ -1.54
CLF1YLR117C UBX2Q04228 584 aa5.43□□□□□ -1.54
CLF1YLR117C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54 RIP-Chip
CLF1YLR117C MCM1P11746 286 aa5.42□□□□□ -1.54
CLF1YLR117C YEF3P16521 1044 aaKnown RBP5.42□□□□□ -1.54
CLF1YLR117C PHO87P25360 923 aa5.42□□□□□ -1.54
CLF1YLR117C RAD16P31244 790 aa5.42□□□□□ -1.54
CLF1YLR117C RTG3P38165 486 aa5.42□□□□□ -1.54
CLF1YLR117C SPO19Q03029 223 aa5.42□□□□□ -1.54
CLF1YLR117C HOT1Q03213 719 aa5.42□□□□□ -1.54
CLF1YLR117C AOS1Q06624 347 aa5.42□□□□□ -1.54
CLF1YLR117C YRF1-4O13559 1382 aa5.42□□□□□ -1.54
CLF1YLR117C YML133CQ03099 1374 aa5.42□□□□□ -1.54
CLF1YLR117C YLL067CQ07888 1374 aa5.42□□□□□ -1.54
CLF1YLR117C YLL066CQ99208 1374 aa5.42□□□□□ -1.54
CLF1YLR117C SES1P07284 462 aaKnown RBP5.41□□□□□ -1.54
CLF1YLR117C BIK1P11709 440 aa5.41□□□□□ -1.54
CLF1YLR117C PDI1P17967 522 aaKnown RBP5.41□□□□□ -1.54
CLF1YLR117C SPT16P32558 1035 aaKnown RBP5.41□□□□□ -1.54
CLF1YLR117C YME2P32843 850 aa5.41□□□□□ -1.54
CLF1YLR117C NUF2P33895 451 aa5.41□□□□□ -1.54
CLF1YLR117C MPH1P40562 993 aa5.41□□□□□ -1.54
CLF1YLR117C APL6P46682 809 aa5.41□□□□□ -1.54
CLF1YLR117C PDR11P40550 1411 aa5.41□□□□□ -1.54
CLF1YLR117C PET123P17558 318 aa5.41□□□□□ -1.54
CLF1YLR117C MAK11P20484 414 aaKnown RBP5.41□□□□□ -1.54
CLF1YLR117C MRPS28P21771 286 aa5.41□□□□□ -1.54
CLF1YLR117C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
CLF1YLR117C ARO80Q04052 950 aa5.41□□□□□ -1.54
CLF1YLR117C ITT1Q04638 464 aa5.41□□□□□ -1.54
CLF1YLR117C COG4Q06096 861 aa5.41□□□□□ -1.54
CLF1YLR117C MLP1Q02455 1875 aaKnown RBP5.4□□□□□ -1.54
CLF1YLR117C NUP188P52593 1655 aaKnown RBP5.4□□□□□ -1.54
CLF1YLR117C VMR1P38735 1592 aa5.4□□□□□ -1.54
CLF1YLR117C LYS2P07702 1392 aa5.4□□□□□ -1.54
CLF1YLR117C TY4B-PA0A0B7P3V8 1104 aa5.4□□□□□ -1.54
CLF1YLR117C ARD1P07347 238 aaPredicted RBP5.4□□□□□ -1.54
CLF1YLR117C CDC11P32458 415 aa5.4□□□□□ -1.54
CLF1YLR117C RFC5P38251 354 aa5.4□□□□□ -1.54
CLF1YLR117C AIM20P40451 204 aa5.4□□□□□ -1.54
CLF1YLR117C SEC26P41810 973 aaKnown RBP5.4□□□□□ -1.54
CLF1YLR117C CTK3P46963 296 aaPredicted RBP5.4□□□□□ -1.54
CLF1YLR117C GCR2Q01722 534 aa5.4□□□□□ -1.54
CLF1YLR117C GGA1Q06336 557 aa5.4□□□□□ -1.54
CLF1YLR117C TPD3P31383 635 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms