RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeastyeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC4YLR086W ALD4P46367 519 aaKnown RBP2.1□□□□□ -2.07
SMC4YLR086W NOP7P53261 605 aaKnown RBP2.1□□□□□ -2.07
SMC4YLR086W CBC2Q08920 208 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
SMC4YLR086W MNL2Q12205 849 aa2.1□□□□□ -2.07
SMC4YLR086W AIM44Q99299 758 aa2.1□□□□□ -2.07
SMC4YLR086W CYT1P07143 309 aa2.09□□□□□ -2.07
SMC4YLR086W NTH2P35172 780 aa2.09□□□□□ -2.07
SMC4YLR086W SWI5P08153 709 aa2.09□□□□□ -2.07
SMC4YLR086W RPS6AP0CX37 236 aaKnown RBP2.09□□□□□ -2.07
SMC4YLR086W RPS6BP0CX38 236 aaPredicted RBP2.09□□□□□ -2.07
SMC4YLR086W YBR197CP38306 217 aa2.09□□□□□ -2.07
SMC4YLR086W MSN5P52918 1224 aa2.09□□□□□ -2.07
SMC4YLR086W TRS120Q04183 1289 aa2.09□□□□□ -2.07
SMC4YLR086W KAR5Q04746 504 aa2.09□□□□□ -2.07
SMC4YLR086W ISR1Q06098 443 aaKnown RBP2.09□□□□□ -2.07
SMC4YLR086W VPS35P34110 944 aa2.09□□□□□ -2.08
SMC4YLR086W MSB3P48566 633 aaPredicted RBP2.09□□□□□ -2.08
SMC4YLR086W GYP1Q08484 637 aa2.09□□□□□ -2.08
SMC4YLR086W FUR4P05316 633 aaKnown RBP2.08□□□□□ -2.08
SMC4YLR086W SUM1P46676 1062 aa2.08□□□□□ -2.08
SMC4YLR086W CAB1Q04430 367 aa2.08□□□□□ -2.08
SMC4YLR086W NUT2Q06213 157 aa2.08□□□□□ -2.08
SMC4YLR086W UTR2P32623 467 aa2.08□□□□□ -2.08
SMC4YLR086W KTR2P33550 425 aa2.08□□□□□ -2.08
SMC4YLR086W KTR7P40504 517 aa2.08□□□□□ -2.08
SMC4YLR086W PUN1Q06991 263 aa2.08□□□□□ -2.08
SMC4YLR086W STB3Q12427 513 aa2.08□□□□□ -2.08
SMC4YLR086W PHO4P07270 312 aaKnown RBP2.08□□□□□ -2.08
SMC4YLR086W YHL050CP38721 697 aa2.08□□□□□ -2.08
SMC4YLR086W YHR219WP38900 624 aa2.08□□□□□ -2.08
SMC4YLR086W BDP1P46678 594 aa2.08□□□□□ -2.08
SMC4YLR086W SKP1P52286 194 aa2.08□□□□□ -2.08
SMC4YLR086W WTM2Q12206 467 aa2.08□□□□□ -2.08
SMC4YLR086W AMS1P22855 1083 aa2.08□□□□□ -2.08
SMC4YLR086W DAL1P32375 460 aa2.08□□□□□ -2.08
SMC4YLR086W MET4P32389 672 aa2.08□□□□□ -2.08
SMC4YLR086W QDR1P40475 563 aa2.08□□□□□ -2.08
SMC4YLR086W YJL171CP46992 396 aa2.08□□□□□ -2.08
SMC4YLR086W DOS2P54858 310 aa2.08□□□□□ -2.08
SMC4YLR086W CDC55Q00362 526 aa2.08□□□□□ -2.08
SMC4YLR086W PDI1P17967 522 aaKnown RBP2.07□□□□□ -2.08
SMC4YLR086W MRPL33P20084 86 aa2.07□□□□□ -2.08
SMC4YLR086W BOI1P38041 980 aaKnown RBP2.07□□□□□ -2.08
SMC4YLR086W WHI5Q12416 295 aa2.07□□□□□ -2.08
SMC4YLR086W SMC1P32908 1225 aa2.07□□□□□ -2.08
SMC4YLR086W BCK2P33306 851 aa2.07□□□□□ -2.08
SMC4YLR086W MKS1P34072 584 aa2.07□□□□□ -2.08
SMC4YLR086W OCA5P38738 679 aa2.07□□□□□ -2.08
SMC4YLR086W IPL1P38991 367 aa2.07□□□□□ -2.08
SMC4YLR086W RPC31P17890 251 aa2.07□□□□□ -2.08
SMC4YLR086W AFT1P22149 690 aa2.07□□□□□ -2.08
SMC4YLR086W TBS1P38114 1094 aa2.07□□□□□ -2.08
SMC4YLR086W NTA1P40354 457 aa2.07□□□□□ -2.08
SMC4YLR086W SAP155P43612 1002 aa2.07□□□□□ -2.08
SMC4YLR086W FRT1Q99332 602 aa2.07□□□□□ -2.08
SMC4YLR086W TOM1Q03280 3268 aa2.07□□□□□ -2.08
SMC4YLR086W CDC4P07834 779 aa2.06□□□□□ -2.08
SMC4YLR086W TAF13P11747 167 aa2.06□□□□□ -2.08
SMC4YLR086W MIP1P15801 1254 aa2.06□□□□□ -2.08
SMC4YLR086W GCD6P32501 712 aaKnown RBP2.06□□□□□ -2.08
SMC4YLR086W MNR2P35724 969 aa2.06□□□□□ -2.08
SMC4YLR086W YBR287WP38355 427 aa2.06□□□□□ -2.08
SMC4YLR086W SSN3P39073 555 aa2.06□□□□□ -2.08
SMC4YLR086W CST6P40535 587 aa2.06□□□□□ -2.08
SMC4YLR086W YNL011CP53980 444 aa2.06□□□□□ -2.08
SMC4YLR086W MSH6Q03834 1242 aa2.06□□□□□ -2.08
SMC4YLR086W GPI13Q07830 1017 aa2.06□□□□□ -2.08
SMC4YLR086W LEU1P07264 779 aaKnown RBP2.06□□□□□ -2.08
SMC4YLR086W ENT3P47160 408 aa2.06□□□□□ -2.08
SMC4YLR086W RPP1AP05318 106 aaPredicted RBP2.06□□□□□ -2.08
SMC4YLR086W RPS31P05759 152 aaKnown RBP2.06□□□□□ -2.08
SMC4YLR086W ATE1P16639 503 aa2.06□□□□□ -2.08
SMC4YLR086W KIP2P28743 706 aa2.06□□□□□ -2.08
SMC4YLR086W VRP1P37370 817 aa2.05□□□□□ -2.08
SMC4YLR086W MGE1P38523 228 aa2.05□□□□□ -2.08
SMC4YLR086W SAM37P50110 327 aa2.05□□□□□ -2.08
SMC4YLR086W BDS1Q08347 646 aa2.05□□□□□ -2.08
SMC4YLR086W PRP5P21372 849 aaPredicted RBP2.05□□□□□ -2.08
SMC4YLR086W SLA1P32790 1244 aa2.05□□□□□ -2.08
SMC4YLR086W DYS1P38791 387 aa2.05□□□□□ -2.08
SMC4YLR086W ALD2P47771 506 aa2.05□□□□□ -2.08
SMC4YLR086W YGR122WP53272 402 aa2.05□□□□□ -2.08
SMC4YLR086W VMA3P25515 160 aa2.05□□□□□ -2.08
SMC4YLR086W YJL049WP47048 450 aa2.05□□□□□ -2.08
SMC4YLR086W POL32P47110 350 aa2.05□□□□□ -2.08
SMC4YLR086W FRK1Q03002 865 aaPredicted RBP2.05□□□□□ -2.08
SMC4YLR086W GRS1P38088 690 aaKnown RBP2.05□□□□□ -2.08
SMC4YLR086W FPR4Q06205 392 aaPredicted RBP2.05□□□□□ -2.08
SMC4YLR086W ISC10P32645 267 aa2.04□□□□□ -2.08
SMC4YLR086W IRS4P36115 615 aaKnown RBP2.04□□□□□ -2.08
SMC4YLR086W GLO3P38682 493 aaKnown RBP2.04□□□□□ -2.08
SMC4YLR086W HXT8P40886 569 aa2.04□□□□□ -2.08
SMC4YLR086W YOR296WQ08748 1289 aa2.04□□□□□ -2.08
SMC4YLR086W YTA7P40340 1379 aa2.04□□□□□ -2.08
SMC4YLR086W ARG82P07250 355 aa2.04□□□□□ -2.08
SMC4YLR086W CIC1P38779 376 aaKnown RBP2.04□□□□□ -2.08
SMC4YLR086W YER156CP40093 338 aaKnown RBP2.04□□□□□ -2.08
SMC4YLR086W AAD14P42884 376 aa2.04□□□□□ -2.08
SMC4YLR086W RGD2P43556 714 aa2.04□□□□□ -2.08
SMC4YLR086W NNF1P47149 201 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms