RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W MAC1P35192 417 aa5.6□□□□□ -1.51
ABF1YKL112W MAP2P38174 421 aaKnown RBP5.6□□□□□ -1.51
ABF1YKL112W XKS1P42826 600 aa5.6□□□□□ -1.51
ABF1YKL112W KIN4Q01919 800 aa5.6□□□□□ -1.51
ABF1YKL112W YSH1Q06224 779 aaPredicted RBP5.6□□□□□ -1.51
ABF1YKL112W FAS2P19097 1887 aaKnown RBP5.6□□□□□ -1.51
ABF1YKL112W PKH1Q03407 766 aa5.59□□□□□ -1.51
ABF1YKL112W TAF8Q03750 510 aa5.59□□□□□ -1.51
ABF1YKL112W SSM4P40318 1319 aa5.59□□□□□ -1.51
ABF1YKL112W RAD4P14736 754 aa5.59□□□□□ -1.52
ABF1YKL112W SDH2P21801 266 aa5.59□□□□□ -1.52
ABF1YKL112W RPS9BP05755 195 aaKnown RBP5.58□□□□□ -1.52
ABF1YKL112W SPB4P25808 606 aaPredicted RBP5.58□□□□□ -1.52
ABF1YKL112W OCA5P38738 679 aa5.58□□□□□ -1.52
ABF1YKL112W SEC9P40357 651 aa5.58□□□□□ -1.52
ABF1YKL112W CFT2Q12102 859 aaPredicted RBP5.58□□□□□ -1.52
ABF1YKL112W SLD2P34252 453 aa5.57□□□□□ -1.52
ABF1YKL112W TOM20P35180 183 aa5.57□□□□□ -1.52
ABF1YKL112W YDR341CQ05506 607 aaKnown RBP5.57□□□□□ -1.52
ABF1YKL112W CHZ1P40019 153 aaPredicted RBP5.57□□□□□ -1.52
ABF1YKL112W YAF9P53930 226 aa5.57□□□□□ -1.52
ABF1YKL112W MEC3Q02574 474 aa5.57□□□□□ -1.52
ABF1YKL112W RAD51P25454 400 aa5.56□□□□□ -1.52
ABF1YKL112W DJP1P40564 432 aa5.56□□□□□ -1.52
ABF1YKL112W YGR130CP53278 816 aa5.56□□□□□ -1.52
ABF1YKL112W GDE1Q02979 1223 aa5.56□□□□□ -1.52
ABF1YKL112W SIR4P11978 1358 aa5.56□□□□□ -1.52
ABF1YKL112W MTR4P47047 1073 aaKnown RBP5.56□□□□□ -1.52
ABF1YKL112W VPS4P52917 437 aa5.56□□□□□ -1.52
ABF1YKL112W RCF1Q03713 159 aa5.56□□□□□ -1.52
ABF1YKL112W ERP2P39704 215 aa5.55□□□□□ -1.52
ABF1YKL112W POL5P39985 1022 aaKnown RBP5.55□□□□□ -1.52
ABF1YKL112W TAF1P46677 1066 aa5.55□□□□□ -1.52
ABF1YKL112W TY1B-AO13527 1196 aaKnown RBP5.55□□□□□ -1.52
ABF1YKL112W ESL2P36168 1195 aa5.55□□□□□ -1.52
ABF1YKL112W NMD2P38798 1089 aaKnown RBP5.55□□□□□ -1.52
ABF1YKL112W NMD3P38861 518 aaKnown RBP5.55□□□□□ -1.52
ABF1YKL112W CEF1Q03654 590 aaPredicted RBP5.55□□□□□ -1.52
ABF1YKL112W YDL121CQ07541 149 aa5.55□□□□□ -1.52
ABF1YKL112W NYV1Q12255 253 aa5.55□□□□□ -1.52
ABF1YKL112W MAM3Q12296 706 aa5.55□□□□□ -1.52
ABF1YKL112W SPC110P32380 944 aa5.54□□□□□ -1.52
ABF1YKL112W RRT14P40470 206 aa5.54□□□□□ -1.52
ABF1YKL112W ETT1Q08421 412 aaKnown RBP5.54□□□□□ -1.52
ABF1YKL112W CLF1Q12309 687 aaPredicted RBP5.54□□□□□ -1.52
ABF1YKL112W RIX1P38883 763 aaPredicted RBP5.53□□□□□ -1.52
ABF1YKL112W BOI2P39969 1040 aa5.53□□□□□ -1.52
ABF1YKL112W SYH1Q02875 849 aaKnown RBP5.53□□□□□ -1.52
ABF1YKL112W FRK1Q03002 865 aaPredicted RBP5.53□□□□□ -1.52
ABF1YKL112W GRE2Q12068 342 aaKnown RBP5.53□□□□□ -1.52
ABF1YKL112W UTP10P42945 1769 aaKnown RBP5.53□□□□□ -1.52
ABF1YKL112W VMA4P22203 233 aaKnown RBP5.52□□□□□ -1.53
ABF1YKL112W RRN6P32786 894 aa5.52□□□□□ -1.53
ABF1YKL112W LEM3P42838 414 aa5.52□□□□□ -1.53
ABF1YKL112W HPC2Q01448 625 aa5.52□□□□□ -1.53
ABF1YKL112W APL5Q08951 932 aaKnown RBP5.52□□□□□ -1.53
ABF1YKL112W SRF1Q12516 437 aa5.52□□□□□ -1.53
ABF1YKL112W RPO41P13433 1351 aaKnown RBP5.52□□□□□ -1.53
ABF1YKL112W KIN1P13185 1064 aa5.52□□□□□ -1.53
ABF1YKL112W CWH41P53008 833 aa5.52□□□□□ -1.53
ABF1YKL112W YLR257WQ06146 321 aaKnown RBP5.52□□□□□ -1.53
ABF1YKL112W FIG2P25653 1609 aa5.51□□□□□ -1.53
ABF1YKL112W YLR278CQ05854 1341 aa5.51□□□□□ -1.53
ABF1YKL112W LEU2P04173 364 aaPredicted RBP5.51□□□□□ -1.53
ABF1YKL112W OPI1P21957 404 aa5.51□□□□□ -1.53
ABF1YKL112W CSE4P36012 229 aa5.51□□□□□ -1.53
ABF1YKL112W NOC2P39744 710 aaKnown RBP5.51□□□□□ -1.53
ABF1YKL112W VPS27P40343 622 aaKnown RBP5.51□□□□□ -1.53
ABF1YKL112W SEC27P41811 889 aaKnown RBP5.51□□□□□ -1.53
ABF1YKL112W HEL2Q05580 639 aaKnown RBP5.51□□□□□ -1.53
ABF1YKL112W NFU1P32860 256 aa5.5□□□□□ -1.53
ABF1YKL112W TPM2P40414 161 aa5.5□□□□□ -1.53
ABF1YKL112W FAF1P40546 346 aaPredicted RBP5.5□□□□□ -1.53
ABF1YKL112W TMA64Q04600 565 aaKnown RBP5.5□□□□□ -1.53
ABF1YKL112W SUB2Q07478 446 aaKnown RBP5.5□□□□□ -1.53
ABF1YKL112W RET1P22276 1149 aaKnown RBP5.5□□□□□ -1.53
ABF1YKL112W GRX1P25373 110 aaKnown RBP5.5□□□□□ -1.53
ABF1YKL112W MFT1P33441 392 aaKnown RBP5.5□□□□□ -1.53
ABF1YKL112W ADE16P54113 591 aaKnown RBP5.5□□□□□ -1.53
ABF1YKL112W ERP4Q12450 207 aa5.5□□□□□ -1.53
ABF1YKL112W BLI1P35727 113 aa5.49□□□□□ -1.53
ABF1YKL112W RPS24AP0CX31 135 aaKnown RBP5.49□□□□□ -1.53
ABF1YKL112W RPS24BP0CX32 135 aaKnown RBP5.49□□□□□ -1.53
ABF1YKL112W PWP2P25635 923 aaKnown RBP5.49□□□□□ -1.53
ABF1YKL112W RTG2P32608 588 aaKnown RBP5.49□□□□□ -1.53
ABF1YKL112W SLI15P38283 698 aa5.49□□□□□ -1.53
ABF1YKL112W NNF2P53253 936 aa5.49□□□□□ -1.53
ABF1YKL112W ECM16Q04217 1267 aaKnown RBP5.49□□□□□ -1.53
ABF1YKL112W PIM1P36775 1133 aa5.48□□□□□ -1.53
ABF1YKL112W RCR1P38212 213 aa5.48□□□□□ -1.53
ABF1YKL112W PFF1P38244 976 aa5.48□□□□□ -1.53
ABF1YKL112W IES1P43579 692 aa5.48□□□□□ -1.53
ABF1YKL112W HOS2P53096 452 aaPredicted RBP5.48□□□□□ -1.53
ABF1YKL112W ATG20Q07528 640 aa5.48□□□□□ -1.53
ABF1YKL112W RIX7Q07844 837 aaKnown RBP5.48□□□□□ -1.53
ABF1YKL112W SNU66Q12420 587 aaPredicted RBP5.48□□□□□ -1.53
ABF1YKL112W TY4B-PA0A0B7P3V8 1104 aa5.47□□□□□ -1.53
ABF1YKL112W THS1P04801 734 aaKnown RBP5.47□□□□□ -1.53
ABF1YKL112W HEM3P28789 327 aa5.47□□□□□ -1.53
ABF1YKL112W PES4P39684 611 aa5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms