RNA–Protein interactions for RNA: YIL022W

TIM44, Transcript of Essential component of the TIM23 complex, yeastyeast

Gene TIM44, Length 1,296 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM44YIL022W KAR2P16474 682 aaKnown RBP11.21□□□□□ -0.61
TIM44YIL022W BSD2P38356 321 aa11.21□□□□□ -0.61
TIM44YIL022W SAS4Q04003 481 aa11.21□□□□□ -0.61
TIM44YIL022W FIG2P25653 1609 aa11.2□□□□□ -0.62
TIM44YIL022W RPN1P38764 993 aaKnown RBP11.2□□□□□ -0.62
TIM44YIL022W EMP47P43555 445 aa11.2□□□□□ -0.62
TIM44YIL022W AOS1Q06624 347 aa11.2□□□□□ -0.62
TIM44YIL022W PMD1P32634 1753 aa11.19□□□□□ -0.62
TIM44YIL022W DPL1Q05567 589 aa11.19□□□□□ -0.62
TIM44YIL022W ALE1Q08548 619 aa11.19□□□□□ -0.62
TIM44YIL022W KCC4P25389 1037 aa11.18□□□□□ -0.62
TIM44YIL022W SSP2Q08646 371 aa11.18□□□□□ -0.62
TIM44YIL022W TRM44Q02648 567 aaKnown RBP11.17□□□□□ -0.62
TIM44YIL022W HVG1P0CE11 249 aa11.15□□□□□ -0.62
TIM44YIL022W FRD1P32614 470 aaKnown RBP11.15□□□□□ -0.62
TIM44YIL022W PAM1P37304 830 aaKnown RBP11.15□□□□□ -0.62
TIM44YIL022W YGR117CP53270 476 aa11.15□□□□□ -0.62
TIM44YIL022W AKL1P38080 1108 aaKnown RBP11.14□□□□□ -0.63
TIM44YIL022W TIF4632P39936 914 aaKnown RBP11.14□□□□□ -0.63
TIM44YIL022W UBP16Q02863 499 aa11.14□□□□□ -0.63
TIM44YIL022W PAP2P53632 584 aaKnown RBP11.13□□□□□ -0.63
TIM44YIL022W CST9Q06032 482 aa11.13□□□□□ -0.63
TIM44YIL022W HPR1P17629 752 aaKnown RBP11.12□□□□□ -0.63
TIM44YIL022W RSC30P38781 883 aa11.12□□□□□ -0.63
TIM44YIL022W SYF1Q04048 859 aaPredicted RBP11.12□□□□□ -0.63
TIM44YIL022W CSR2Q12734 1121 aa11.12□□□□□ -0.63
TIM44YIL022W VPS4P52917 437 aa11.11□□□□□ -0.63
TIM44YIL022W CRF1Q04930 467 aa11.1□□□□□ -0.63
TIM44YIL022W RPP0P05317 312 aaKnown RBP11.09□□□□□ -0.63
TIM44YIL022W MAL31P38156 614 aa11.09□□□□□ -0.63
TIM44YIL022W RRT6P53117 311 aaPredicted RBP11.09□□□□□ -0.63
TIM44YIL022W IOC4Q04213 475 aa11.09□□□□□ -0.63
TIM44YIL022W HAT1Q12341 374 aa11.08□□□□□ -0.64
TIM44YIL022W PCS60P38137 543 aaKnown RBP RIP-Chip data11.07□□□□□ -0.64not detected
TIM44YIL022W APE3P37302 537 aaKnown RBP11.05□□□□□ -0.64
TIM44YIL022W SEN54Q02825 467 aaPredicted RBP11.05□□□□□ -0.64
TIM44YIL022W SSK22P25390 1331 aaPredicted RBP11.05□□□□□ -0.64
TIM44YIL022W ARG8P18544 423 aa11.04□□□□□ -0.64
TIM44YIL022W AFG2P32794 780 aa11.04□□□□□ -0.64
TIM44YIL022W MOT2P34909 587 aaKnown RBP11.04□□□□□ -0.64
TIM44YIL022W RRG1Q12167 365 aaPredicted RBP11.04□□□□□ -0.64
TIM44YIL022W UGA3P26370 528 aa11.03□□□□□ -0.64
TIM44YIL022W NTH2P35172 780 aa11.03□□□□□ -0.64
TIM44YIL022W STV1P37296 890 aa11.03□□□□□ -0.64
TIM44YIL022W CDC45Q08032 650 aa11.03□□□□□ -0.64
TIM44YIL022W PNT1P38969 423 aa11.02□□□□□ -0.65
TIM44YIL022W DCD1P06773 312 aa11.01□□□□□ -0.65
TIM44YIL022W VPS27P40343 622 aaKnown RBP11.01□□□□□ -0.65
TIM44YIL022W NSE3Q05541 303 aa11□□□□□ -0.65
TIM44YIL022W HKR1P41809 1802 aa11□□□□□ -0.65
TIM44YIL022W SET4P42948 560 aa10.99□□□□□ -0.65
TIM44YIL022W RBA50Q04418 439 aa10.99□□□□□ -0.65
TIM44YIL022W APL2P36000 726 aaPredicted RBP10.98□□□□□ -0.65
TIM44YIL022W YRB30P53107 440 aaPredicted RBP10.98□□□□□ -0.65
TIM44YIL022W UBX2Q04228 584 aa10.98□□□□□ -0.65
TIM44YIL022W CBP1P07252 654 aa10.97□□□□□ -0.65
TIM44YIL022W GAS5Q08193 484 aa10.97□□□□□ -0.65
TIM44YIL022W YPR204WQ08995 1032 aa10.97□□□□□ -0.65
TIM44YIL022W VPS64Q03944 604 aa10.96□□□□□ -0.65
TIM44YIL022W LYS2P07702 1392 aa10.95□□□□□ -0.66
TIM44YIL022W SGD1Q06132 899 aa10.95□□□□□ -0.66
TIM44YIL022W YVH1Q02256 364 aaKnown RBP10.94□□□□□ -0.66
TIM44YIL022W FBP1P09201 348 aa10.93□□□□□ -0.66
TIM44YIL022W KRE2P27809 442 aa10.92□□□□□ -0.66
TIM44YIL022W JIP4Q03361 876 aa10.92□□□□□ -0.66
TIM44YIL022W DPH6Q12429 685 aa10.92□□□□□ -0.66
TIM44YIL022W TRP5P00931 707 aaKnown RBP10.91□□□□□ -0.66
TIM44YIL022W GSM1P42950 618 aa10.91□□□□□ -0.66
TIM44YIL022W PKH1Q03407 766 aa10.91□□□□□ -0.66
TIM44YIL022W PAH1P32567 862 aa10.9□□□□□ -0.66
TIM44YIL022W FPR3P38911 411 aaKnown RBP10.9□□□□□ -0.66
TIM44YIL022W RVB2Q12464 471 aaKnown RBP10.9□□□□□ -0.66
TIM44YIL022W GSC2P40989 1895 aa10.89□□□□□ -0.67
TIM44YIL022W YLR225CQ05948 407 aaKnown RBP10.89□□□□□ -0.67
TIM44YIL022W GAL2P13181 574 aa10.88□□□□□ -0.67
TIM44YIL022W MRPL32P25348 183 aa10.87□□□□□ -0.67
TIM44YIL022W ASH1P34233 588 aa10.87□□□□□ -0.67
TIM44YIL022W SPR3P41901 512 aa10.87□□□□□ -0.67
TIM44YIL022W PRP42Q03776 544 aaKnown RBP10.87□□□□□ -0.67
TIM44YIL022W YDL144CQ07589 356 aa10.87□□□□□ -0.67
TIM44YIL022W ICP55P40051 511 aa10.86□□□□□ -0.67
TIM44YIL022W YNL050CP53952 270 aa10.86□□□□□ -0.67
TIM44YIL022W TRK1P12685 1235 aa10.85□□□□□ -0.67
TIM44YIL022W RPC31P17890 251 aa10.85□□□□□ -0.67
TIM44YIL022W RPT4P53549 437 aaKnown RBP10.85□□□□□ -0.67
TIM44YIL022W YLR271WQ06152 274 aa10.85□□□□□ -0.67
TIM44YIL022W FLO11P08640 1367 aa10.85□□□□□ -0.67
TIM44YIL022W NIT1P40447 199 aa10.84□□□□□ -0.67
TIM44YIL022W ZDS2P54786 942 aa10.84□□□□□ -0.67
TIM44YIL022W VPS13Q07878 3144 aa10.84□□□□□ -0.67
TIM44YIL022W CLA4P48562 842 aa10.83□□□□□ -0.68
TIM44YIL022W PSF2P40359 213 aa10.82□□□□□ -0.68
TIM44YIL022W ZDS1P50111 915 aaKnown RBP10.81□□□□□ -0.68
TIM44YIL022W ULP1Q02724 621 aa10.81□□□□□ -0.68
TIM44YIL022W EAR1Q03212 550 aa10.81□□□□□ -0.68
TIM44YIL022W YPR117WQ06116 2489 aa10.81□□□□□ -0.68
TIM44YIL022W NAB6Q03735 1134 aaKnown RBP RIP-Chip data10.8□□□□□ -0.68not detected
TIM44YIL022W ACK1Q07622 623 aaPredicted RBP10.8□□□□□ -0.68
TIM44YIL022W SUI2P20459 304 aaKnown RBP10.79□□□□□ -0.68
TIM44YIL022W RPS7AP26786 190 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms