RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W YDR306CQ06640 478 aa8.91□□□□□ -0.98
PEX28YHR150W BOI2P39969 1040 aa8.91□□□□□ -0.98
PEX28YHR150W HAP5Q02516 242 aa8.9□□□□□ -0.98
PEX28YHR150W VPS20Q04272 221 aa8.9□□□□□ -0.98
PEX28YHR150W LAM6Q08001 693 aa8.9□□□□□ -0.98
PEX28YHR150W APL2P36000 726 aaPredicted RBP8.89□□□□□ -0.99
PEX28YHR150W FOX2Q02207 900 aaKnown RBP8.89□□□□□ -0.99
PEX28YHR150W PKH1Q03407 766 aa8.89□□□□□ -0.99
PEX28YHR150W SSP2Q08646 371 aa8.89□□□□□ -0.99
PEX28YHR150W TUM1Q08686 304 aaKnown RBP8.89□□□□□ -0.99
PEX28YHR150W MNN4P36044 1178 aa8.88□□□□□ -0.99
PEX28YHR150W RNR2P09938 399 aaKnown RBP8.88□□□□□ -0.99
PEX28YHR150W GRX1P25373 110 aaKnown RBP8.88□□□□□ -0.99
PEX28YHR150W YIL055CP40523 627 aaKnown RBP8.88□□□□□ -0.99
PEX28YHR150W YJL181WP46987 611 aa8.88□□□□□ -0.99
PEX28YHR150W DUR1,2P32528 1835 aaKnown RBP8.87□□□□□ -0.99
PEX28YHR150W SWI1P09547 1314 aa8.87□□□□□ -0.99
PEX28YHR150W LPD1P09624 499 aaKnown RBP8.86□□□□□ -0.99
PEX28YHR150W TRL1P09880 827 aaKnown RBP8.86□□□□□ -0.99
PEX28YHR150W BDH2P39713 417 aa8.86□□□□□ -0.99
PEX28YHR150W RSC1P53236 928 aa8.86□□□□□ -0.99
PEX28YHR150W RMD1Q03441 430 aa8.86□□□□□ -0.99
PEX28YHR150W NCB2Q92317 146 aa8.86□□□□□ -0.99
PEX28YHR150W PRP40P33203 583 aaKnown RBP8.85□□□□□ -0.99
PEX28YHR150W UBP12P39538 1254 aa8.85□□□□□ -0.99
PEX28YHR150W CIR1P42940 261 aa8.85□□□□□ -0.99
PEX28YHR150W TCB2P48231 1178 aa8.85□□□□□ -0.99
PEX28YHR150W CTR9P89105 1077 aa8.85□□□□□ -0.99
PEX28YHR150W YRF1-3P0CX14 1859 aa8.85□□□□□ -0.99
PEX28YHR150W YRF1-7P0CX15 1859 aa8.85□□□□□ -0.99
PEX28YHR150W YRF1-6P53819 1859 aa8.85□□□□□ -0.99
PEX28YHR150W SER1P33330 395 aaKnown RBP8.85□□□□□ -0.99
PEX28YHR150W HGH1P48362 394 aaKnown RBP8.85□□□□□ -0.99
PEX28YHR150W BIK1P11709 440 aa8.84□□□□□ -0.99
PEX28YHR150W YKR075CP36155 307 aa8.84□□□□□ -0.99
PEX28YHR150W YGL082WP53155 381 aa8.84□□□□□ -0.99
PEX28YHR150W MDG1P53885 366 aa8.84□□□□□ -0.99
PEX28YHR150W LCD1Q04377 747 aa8.84□□□□□ -0.99
PEX28YHR150W HRQ1Q05549 1077 aa8.84□□□□□ -0.99
PEX28YHR150W RPN11P43588 306 aaKnown RBP8.83□□□□□ -1
PEX28YHR150W HST1P53685 503 aa8.83□□□□□ -1
PEX28YHR150W RKM3P38222 552 aa8.83□□□□□ -1
PEX28YHR150W KRI1P42846 591 aaKnown RBP8.83□□□□□ -1
PEX28YHR150W FPR4Q06205 392 aaPredicted RBP8.83□□□□□ -1
PEX28YHR150W YPR204WQ08995 1032 aa8.83□□□□□ -1
PEX28YHR150W PHM7Q12252 991 aa8.83□□□□□ -1
PEX28YHR150W RVS167P39743 482 aaKnown RBP8.82□□□□□ -1
PEX28YHR150W YJR008WP47085 338 aa8.82□□□□□ -1
PEX28YHR150W PSH1Q12161 406 aa8.82□□□□□ -1
PEX28YHR150W RPN12P32496 274 aa8.81□□□□□ -1
PEX28YHR150W SSF1P38789 453 aaPredicted RBP8.81□□□□□ -1
PEX28YHR150W YLR271WQ06152 274 aa8.81□□□□□ -1
PEX28YHR150W RIM20Q12033 661 aa8.81□□□□□ -1
PEX28YHR150W MSB4Q12317 492 aa8.81□□□□□ -1
PEX28YHR150W PDR18P53756 1333 aa8.81□□□□□ -1
PEX28YHR150W SUP35P05453 685 aaKnown RBP8.8□□□□□ -1
PEX28YHR150W ECM21P38167 1117 aaKnown RBP8.8□□□□□ -1
PEX28YHR150W FCP1Q03254 732 aa8.8□□□□□ -1
PEX28YHR150W ARG8P18544 423 aa8.8□□□□□ -1
PEX28YHR150W AAP1P37898 856 aaKnown RBP8.8□□□□□ -1
PEX28YHR150W PIL1P53252 339 aaKnown RBP8.8□□□□□ -1
PEX28YHR150W APC11Q12157 165 aa8.8□□□□□ -1
PEX28YHR150W KEX1P09620 729 aa8.79□□□□□ -1
PEX28YHR150W RSM25P40496 264 aa8.79□□□□□ -1
PEX28YHR150W DCD1P06773 312 aa8.78□□□□□ -1
PEX28YHR150W SLA1P32790 1244 aa8.78□□□□□ -1
PEX28YHR150W MRPS35P53292 345 aa8.78□□□□□ -1
PEX28YHR150W GRE2Q12068 342 aaKnown RBP8.78□□□□□ -1
PEX28YHR150W DID4P36108 232 aa8.77□□□□□ -1
PEX28YHR150W SET1P38827 1080 aaKnown RBP8.77□□□□□ -1
PEX28YHR150W HYR1P40581 163 aaKnown RBP8.77□□□□□ -1
PEX28YHR150W HXT10P43581 546 aa8.77□□□□□ -1
PEX28YHR150W KRE33P53914 1056 aaKnown RBP8.77□□□□□ -1
PEX28YHR150W BRE1Q07457 700 aaKnown RBP8.77□□□□□ -1
PEX28YHR150W SNU66Q12420 587 aaPredicted RBP8.77□□□□□ -1
PEX28YHR150W MCM2P29469 868 aa8.77□□□□□ -1.01
PEX28YHR150W RPL19AP0CX82 189 aaKnown RBP8.76□□□□□ -1.01
PEX28YHR150W RPL19BP0CX83 189 aaPredicted RBP8.76□□□□□ -1.01
PEX28YHR150W LEO1P38439 464 aa8.76□□□□□ -1.01
PEX28YHR150W MLC1P53141 149 aa8.76□□□□□ -1.01
PEX28YHR150W UBP1P25037 809 aa8.75□□□□□ -1.01
PEX28YHR150W MIC60P36112 540 aa8.75□□□□□ -1.01
PEX28YHR150W AIM9P40053 627 aaKnown RBP8.75□□□□□ -1.01
PEX28YHR150W CWH41P53008 833 aa8.75□□□□□ -1.01
PEX28YHR150W YGL242CP53066 181 aa8.75□□□□□ -1.01
PEX28YHR150W ALO1P54783 526 aaKnown RBP8.75□□□□□ -1.01
PEX28YHR150W PEX19Q07418 342 aa8.75□□□□□ -1.01
PEX28YHR150W AIM44Q99299 758 aa8.75□□□□□ -1.01
PEX28YHR150W KTR3P38130 404 aaPredicted RBP8.74□□□□□ -1.01
PEX28YHR150W NYV1Q12255 253 aa8.74□□□□□ -1.01
PEX28YHR150W NPR2P39923 615 aa8.74□□□□□ -1.01
PEX28YHR150W MTC5Q03897 1148 aa8.74□□□□□ -1.01
PEX28YHR150W YMR074CQ04773 145 aa8.74□□□□□ -1.01
PEX28YHR150W ENT3P47160 408 aa8.73□□□□□ -1.01
PEX28YHR150W PIB2P53191 635 aa8.73□□□□□ -1.01
PEX28YHR150W CTI6Q08923 506 aa8.73□□□□□ -1.01
PEX28YHR150W TSR3Q12094 313 aaKnown RBP8.73□□□□□ -1.01
PEX28YHR150W BUG1Q12191 341 aa8.73□□□□□ -1.01
PEX28YHR150W KTR1P27810 393 aaKnown RBP8.72□□□□□ -1.01
PEX28YHR150W PRX1P34227 261 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms