RNA–Protein interactions for RNA: YGL212W

VAM7, Transcript of Vacuolar SNARE protein, yeastyeast

Gene VAM7, Length 951 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM7YGL212W TFG1P41895 735 aaPredicted RBP6.53□□□□□ -1.36
VAM7YGL212W ECM16Q04217 1267 aaKnown RBP6.53□□□□□ -1.36
VAM7YGL212W ERP4Q12450 207 aa6.53□□□□□ -1.36
VAM7YGL212W TY4B-PA0A0B7P3V8 1104 aa6.52□□□□□ -1.37
VAM7YGL212W MAL31P38156 614 aa6.52□□□□□ -1.37
VAM7YGL212W MGA2P40578 1113 aa6.52□□□□□ -1.37
VAM7YGL212W RPL34AP87262 121 aaPredicted RBP6.52□□□□□ -1.37
VAM7YGL212W NOP53Q12080 455 aaKnown RBP6.52□□□□□ -1.37
VAM7YGL212W TY4A-HQ6Q5P6 413 aa6.52□□□□□ -1.37
VAM7YGL212W NUP192P47054 1683 aa6.52□□□□□ -1.37
VAM7YGL212W KAR1P11927 433 aa6.51□□□□□ -1.37
VAM7YGL212W SVF1Q05515 481 aa6.51□□□□□ -1.37
VAM7YGL212W SSF2Q12153 453 aaPredicted RBP6.51□□□□□ -1.37
VAM7YGL212W PPG1P32838 368 aa6.5□□□□□ -1.37
VAM7YGL212W NFU1P32860 256 aa6.5□□□□□ -1.37
VAM7YGL212W YKL133CP36066 463 aa6.5□□□□□ -1.37
VAM7YGL212W FPK1P53739 893 aa6.5□□□□□ -1.37
VAM7YGL212W DNM1P54861 757 aa6.5□□□□□ -1.37
VAM7YGL212W ENT2Q05785 613 aa6.5□□□□□ -1.37
VAM7YGL212W PUS1Q12211 544 aaKnown RBP6.5□□□□□ -1.37
VAM7YGL212W TCB1Q12466 1186 aa6.5□□□□□ -1.37
VAM7YGL212W MUM2P38236 366 aa6.49□□□□□ -1.37
VAM7YGL212W SLI15P38283 698 aa6.49□□□□□ -1.37
VAM7YGL212W FAF1P40546 346 aaPredicted RBP6.49□□□□□ -1.37
VAM7YGL212W SEC27P41811 889 aaKnown RBP6.49□□□□□ -1.37
VAM7YGL212W KIN4Q01919 800 aa6.49□□□□□ -1.37
VAM7YGL212W GDE1Q02979 1223 aa6.49□□□□□ -1.37
VAM7YGL212W YOL098CQ12496 1037 aa6.49□□□□□ -1.37
VAM7YGL212W YRF1-4O13559 1382 aa6.48□□□□□ -1.37
VAM7YGL212W MHP1P43638 1398 aa6.48□□□□□ -1.37
VAM7YGL212W SET1P38827 1080 aaKnown RBP6.48□□□□□ -1.37
VAM7YGL212W TFB3Q03290 321 aa6.48□□□□□ -1.37
VAM7YGL212W YDR341CQ05506 607 aaKnown RBP6.48□□□□□ -1.37
VAM7YGL212W MAK21Q12176 1025 aaKnown RBP6.48□□□□□ -1.37
VAM7YGL212W YPR117WQ06116 2489 aa6.47□□□□□ -1.37
VAM7YGL212W TY1B-AO13527 1196 aaKnown RBP6.47□□□□□ -1.37
VAM7YGL212W RPL17AP05740 184 aaKnown RBP6.47□□□□□ -1.37
VAM7YGL212W PBS2P08018 668 aa6.47□□□□□ -1.37
VAM7YGL212W DPB3P27344 201 aa6.47□□□□□ -1.37
VAM7YGL212W FUN12P39730 1002 aaKnown RBP6.47□□□□□ -1.37
VAM7YGL212W DJP1P40564 432 aa6.47□□□□□ -1.37
VAM7YGL212W RPL17BP46990 184 aaKnown RBP6.47□□□□□ -1.37
VAM7YGL212W YSH1Q06224 779 aaPredicted RBP6.47□□□□□ -1.37
VAM7YGL212W THS1P04801 734 aaKnown RBP6.46□□□□□ -1.38
VAM7YGL212W RPN12P32496 274 aa6.46□□□□□ -1.38
VAM7YGL212W PPX1P38698 397 aa6.46□□□□□ -1.38
VAM7YGL212W TAF1P46677 1066 aa6.46□□□□□ -1.38
VAM7YGL212W HOS2P53096 452 aaPredicted RBP6.46□□□□□ -1.38
VAM7YGL212W YVH1Q02256 364 aaKnown RBP6.46□□□□□ -1.38
VAM7YGL212W RCF1Q03713 159 aa6.46□□□□□ -1.38
VAM7YGL212W GRX3Q03835 250 aa6.46□□□□□ -1.38
VAM7YGL212W NSE3Q05541 303 aa6.46□□□□□ -1.38
VAM7YGL212W YLR257WQ06146 321 aaKnown RBP6.46□□□□□ -1.38
VAM7YGL212W YLR271WQ06152 274 aa6.46□□□□□ -1.38
VAM7YGL212W SNU66Q12420 587 aaPredicted RBP6.46□□□□□ -1.38
VAM7YGL212W YKL222CP35995 705 aa6.45□□□□□ -1.38
VAM7YGL212W POB3Q04636 552 aaKnown RBP6.45□□□□□ -1.38
VAM7YGL212W APL5Q08951 932 aaKnown RBP6.45□□□□□ -1.38
VAM7YGL212W NUM1Q00402 2748 aa6.45□□□□□ -1.38
VAM7YGL212W CPS1P27614 576 aa6.44□□□□□ -1.38
VAM7YGL212W VPS24P36095 224 aaKnown RBP6.44□□□□□ -1.38
VAM7YGL212W TOS1P38288 455 aa6.44□□□□□ -1.38
VAM7YGL212W PEA2P40091 420 aa6.44□□□□□ -1.38
VAM7YGL212W CWH41P53008 833 aa6.44□□□□□ -1.38
VAM7YGL212W ALG12P53730 551 aa6.44□□□□□ -1.38
VAM7YGL212W MDM1Q01846 1127 aa6.44□□□□□ -1.38
VAM7YGL212W OYE2Q03558 400 aaKnown RBP6.44□□□□□ -1.38
VAM7YGL212W CFT2Q12102 859 aaPredicted RBP6.44□□□□□ -1.38
VAM7YGL212W HSP42Q12329 375 aa6.44□□□□□ -1.38
VAM7YGL212W NOP58Q12499 511 aaKnown RBP6.44□□□□□ -1.38
VAM7YGL212W SRF1Q12516 437 aa6.44□□□□□ -1.38
VAM7YGL212W TY4B-HP0C2J7 1802 aa6.43□□□□□ -1.38
VAM7YGL212W TY4B-JP47024 1803 aa6.43□□□□□ -1.38
VAM7YGL212W GRX4P32642 244 aa6.43□□□□□ -1.38
VAM7YGL212W BUG1Q12191 341 aa6.43□□□□□ -1.38
VAM7YGL212W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
VAM7YGL212W SWI3P32591 825 aa6.42□□□□□ -1.38
VAM7YGL212W VHR2P40041 505 aa6.42□□□□□ -1.38
VAM7YGL212W PRP3Q03338 469 aaPredicted RBP6.42□□□□□ -1.38
VAM7YGL212W JIP5Q06214 492 aaPredicted RBP6.42□□□□□ -1.38
VAM7YGL212W HAT1Q12341 374 aa6.42□□□□□ -1.38
VAM7YGL212W YRF1-3P0CX14 1859 aa6.41□□□□□ -1.38
VAM7YGL212W YRF1-7P0CX15 1859 aa6.41□□□□□ -1.38
VAM7YGL212W YRF1-6P53819 1859 aa6.41□□□□□ -1.38
VAM7YGL212W RET1P22276 1149 aaKnown RBP6.41□□□□□ -1.38
VAM7YGL212W SEC6P32844 805 aa6.41□□□□□ -1.38
VAM7YGL212W TFC3P34111 1160 aa6.41□□□□□ -1.38
VAM7YGL212W BIM1P40013 344 aa6.41□□□□□ -1.38
VAM7YGL212W PIL1P53252 339 aaKnown RBP6.41□□□□□ -1.38
VAM7YGL212W MSB4Q12317 492 aa6.41□□□□□ -1.38
VAM7YGL212W TIF6Q12522 245 aaKnown RBP6.41□□□□□ -1.38
VAM7YGL212W OXP1P28273 1286 aa6.4□□□□□ -1.38
VAM7YGL212W GRX7P38068 203 aa6.4□□□□□ -1.38
VAM7YGL212W ERT1P38140 529 aa6.4□□□□□ -1.38
VAM7YGL212W FUI1P38196 639 aa6.4□□□□□ -1.38
VAM7YGL212W RRT14P40470 206 aa6.4□□□□□ -1.38
VAM7YGL212W MTR4P47047 1073 aaKnown RBP6.4□□□□□ -1.38
VAM7YGL212W SVL3Q03088 825 aaKnown RBP6.4□□□□□ -1.38
VAM7YGL212W VMS1Q04311 632 aaKnown RBP6.4□□□□□ -1.38
VAM7YGL212W VPS5Q92331 675 aa6.4□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms