RNA–Protein interactions for RNA: YGL207W

SPT16, Transcript of Subunit of the heterodimeric FACT complex (Spt16p-Pob3p), yeast

Gene SPT16, Length 3,108 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT16	YGL207W	RPN12	P32496	274 aa		4.25	□□□□□ -1.73
SPT16	YGL207W	SLX5	P32828	619 aa	Known RBP	4.25	□□□□□ -1.73
SPT16	YGL207W	YHL050C	P38721	697 aa		4.25	□□□□□ -1.73
SPT16	YGL207W	YHR219W	P38900	624 aa		4.25	□□□□□ -1.73
SPT16	YGL207W	VID27	P40157	782 aa		4.25	□□□□□ -1.73
SPT16	YGL207W	LEM3	P42838	414 aa		4.25	□□□□□ -1.73
SPT16	YGL207W	BNI4	P53858	892 aa		4.25	□□□□□ -1.73
SPT16	YGL207W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
SPT16	YGL207W	ENT2	Q05785	613 aa		4.25	□□□□□ -1.73
SPT16	YGL207W	YEL077C	Q3E7X8	1277 aa		4.25	□□□□□ -1.73
SPT16	YGL207W	MRC1	P25588	1096 aa		4.24	□□□□□ -1.73
SPT16	YGL207W	RRN3	P36070	627 aa		4.24	□□□□□ -1.73
SPT16	YGL207W	RTG3	P38165	486 aa		4.24	□□□□□ -1.73
SPT16	YGL207W	APE4	P38821	490 aa		4.24	□□□□□ -1.73
SPT16	YGL207W	GPI8	P49018	411 aa		4.24	□□□□□ -1.73
SPT16	YGL207W	POB3	Q04636	552 aa	Known RBP	4.24	□□□□□ -1.73
SPT16	YGL207W	HSP82	P02829	709 aa	Known RBP	4.24	□□□□□ -1.73
SPT16	YGL207W	BLI1	P35727	113 aa		4.24	□□□□□ -1.73
SPT16	YGL207W	REF2	P42073	533 aa	Predicted RBP	4.24	□□□□□ -1.73
SPT16	YGL207W	RIM21	P48565	533 aa		4.24	□□□□□ -1.73
SPT16	YGL207W	YGR016W	P53209	190 aa		4.24	□□□□□ -1.73
SPT16	YGL207W	RPL34A	P87262	121 aa	Predicted RBP	4.24	□□□□□ -1.73
SPT16	YGL207W	FRT1	Q99332	602 aa		4.24	□□□□□ -1.73
SPT16	YGL207W	VAC8	P39968	578 aa		4.24	□□□□□ -1.73
SPT16	YGL207W	FYV10	P40492	516 aa		4.23	□□□□□ -1.73
SPT16	YGL207W	YNR029C	P53729	429 aa	Known RBP	4.23	□□□□□ -1.73
SPT16	YGL207W	RRP36	Q12481	300 aa	Predicted RBP	4.23	□□□□□ -1.73
SPT16	YGL207W	RED1	P14291	827 aa		4.23	□□□□□ -1.73
SPT16	YGL207W	VMA1	P17255	1071 aa	Known RBP	4.23	□□□□□ -1.73
SPT16	YGL207W	RAD27	P26793	382 aa		4.23	□□□□□ -1.73
SPT16	YGL207W	MNN1	P39106	762 aa		4.23	□□□□□ -1.73
SPT16	YGL207W	RTT105	P40063	208 aa		4.23	□□□□□ -1.73
SPT16	YGL207W	YJL049W	P47048	450 aa		4.23	□□□□□ -1.73
SPT16	YGL207W	ATP4	P05626	244 aa		4.22	□□□□□ -1.73
SPT16	YGL207W	KRR1	P25586	316 aa	Predicted RBP	4.22	□□□□□ -1.73
SPT16	YGL207W	TGL4	P36165	910 aa		4.22	□□□□□ -1.73
SPT16	YGL207W	VPS29	P38759	282 aa		4.22	□□□□□ -1.73
SPT16	YGL207W	UTP13	Q05946	817 aa	Known RBP	4.22	□□□□□ -1.73
SPT16	YGL207W	SMD2	Q06217	110 aa	Known RBP	4.22	□□□□□ -1.73
SPT16	YGL207W	URA1	P28272	314 aa	Predicted RBP	4.22	□□□□□ -1.73
SPT16	YGL207W	GUT1	P32190	709 aa		4.22	□□□□□ -1.73
SPT16	YGL207W	IMP2'	P32351	346 aa		4.22	□□□□□ -1.73
SPT16	YGL207W	PIM1	P36775	1133 aa		4.22	□□□□□ -1.73
SPT16	YGL207W	GPI13	Q07830	1017 aa		4.22	□□□□□ -1.73
SPT16	YGL207W	SDH5	Q08230	162 aa		4.22	□□□□□ -1.73
SPT16	YGL207W	PPG1	P32838	368 aa		4.21	□□□□□ -1.73
SPT16	YGL207W	MIF2	P35201	549 aa		4.21	□□□□□ -1.73
SPT16	YGL207W	MET1	P36150	593 aa		4.21	□□□□□ -1.73
SPT16	YGL207W	MTR4	P47047	1073 aa	Known RBP	4.21	□□□□□ -1.73
SPT16	YGL207W	GPG1	P53130	126 aa		4.21	□□□□□ -1.73
SPT16	YGL207W	CFT2	Q12102	859 aa	Predicted RBP	4.21	□□□□□ -1.73
SPT16	YGL207W	CEX1	Q12453	761 aa		4.21	□□□□□ -1.73
SPT16	YGL207W	YOL087C	Q99247	1116 aa		4.21	□□□□□ -1.73
SPT16	YGL207W	RAD4	P14736	754 aa		4.21	□□□□□ -1.74
SPT16	YGL207W	BRF1	P29056	596 aa		4.21	□□□□□ -1.74
SPT16	YGL207W	VPS41	P38959	992 aa		4.21	□□□□□ -1.74
SPT16	YGL207W	YSH1	Q06224	779 aa	Predicted RBP	4.21	□□□□□ -1.74
SPT16	YGL207W	VIP1	Q06685	1146 aa	Known RBP	4.21	□□□□□ -1.74
SPT16	YGL207W	HSP42	Q12329	375 aa		4.21	□□□□□ -1.74
SPT16	YGL207W	NOP58	Q12499	511 aa	Known RBP	4.21	□□□□□ -1.74
SPT16	YGL207W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
SPT16	YGL207W	YEN1	P40028	759 aa		4.21	□□□□□ -1.74
SPT16	YGL207W	CSN12	P47130	423 aa		4.21	□□□□□ -1.74
SPT16	YGL207W	HOT1	Q03213	719 aa		4.21	□□□□□ -1.74
SPT16	YGL207W	HOM3	P10869	527 aa		4.2	□□□□□ -1.74
SPT16	YGL207W	ELA1	P53861	379 aa	Predicted RBP	4.2	□□□□□ -1.74
SPT16	YGL207W	RSC2	Q06488	889 aa		4.2	□□□□□ -1.74
SPT16	YGL207W	ENO1	P00924	437 aa	Known RBP	4.2	□□□□□ -1.74
SPT16	YGL207W	SWI3	P32591	825 aa		4.2	□□□□□ -1.74
SPT16	YGL207W	ATG16	Q03818	150 aa		4.2	□□□□□ -1.74
SPT16	YGL207W	SPO71	Q03868	1245 aa		4.2	□□□□□ -1.74
SPT16	YGL207W	HEL2	Q05580	639 aa	Known RBP	4.2	□□□□□ -1.74
SPT16	YGL207W	NAT1	P12945	854 aa	Known RBP	4.19	□□□□□ -1.74
SPT16	YGL207W	PEX5	P35056	612 aa		4.19	□□□□□ -1.74
SPT16	YGL207W	BOL3	P39724	118 aa		4.19	□□□□□ -1.74
SPT16	YGL207W	ALD6	P54115	500 aa	Known RBP	4.19	□□□□□ -1.74
SPT16	YGL207W	YLH47	Q06493	454 aa		4.19	□□□□□ -1.74
SPT16	YGL207W	DNA2	P38859	1522 aa		4.19	□□□□□ -1.74
SPT16	YGL207W	CDC31	P06704	161 aa	Known RBP	4.19	□□□□□ -1.74
SPT16	YGL207W	COQ8	P27697	501 aa		4.19	□□□□□ -1.74
SPT16	YGL207W	RSC30	P38781	883 aa		4.19	□□□□□ -1.74
SPT16	YGL207W	ESL1	P40456	1118 aa		4.19	□□□□□ -1.74
SPT16	YGL207W	SRP1	Q02821	542 aa	Known RBP	4.19	□□□□□ -1.74
SPT16	YGL207W	SLX4	Q12098	748 aa		4.19	□□□□□ -1.74
SPT16	YGL207W	CIT1	P00890	479 aa		4.19	□□□□□ -1.74
SPT16	YGL207W	ACF4	P47129	309 aa		4.19	□□□□□ -1.74
SPT16	YGL207W	GRC3	Q07845	632 aa		4.19	□□□□□ -1.74
SPT16	YGL207W	PGC1	Q08959	321 aa		4.19	□□□□□ -1.74
SPT16	YGL207W	ENO2	P00925	437 aa	Known RBP	4.18	□□□□□ -1.74
SPT16	YGL207W	AAD3	P25612	363 aa		4.18	□□□□□ -1.74
SPT16	YGL207W	SRP40	P32583	406 aa	Predicted RBP	4.18	□□□□□ -1.74
SPT16	YGL207W	EDS1	P38073	919 aa		4.18	□□□□□ -1.74
SPT16	YGL207W	MSH4	P40965	878 aa	Predicted RBP	4.18	□□□□□ -1.74
SPT16	YGL207W	DPH6	Q12429	685 aa		4.18	□□□□□ -1.74
SPT16	YGL207W	YKL091C	P33324	310 aa	Known RBP	4.18	□□□□□ -1.74
SPT16	YGL207W	MAM1	P40065	302 aa		4.18	□□□□□ -1.74
SPT16	YGL207W	GPP1	P41277	250 aa	Known RBP	4.18	□□□□□ -1.74
SPT16	YGL207W	YJR120W	P47157	116 aa		4.18	□□□□□ -1.74
SPT16	YGL207W	MAL11	P53048	616 aa		4.18	□□□□□ -1.74
SPT16	YGL207W	RSC1	P53236	928 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms