RNA–Protein interactions for RNA: YER116C

SLX8, Transcript of Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex, yeast

Gene SLX8, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX8	YER116C	PPX1	P38698	397 aa		5.15	□□□□□ -1.59
SLX8	YER116C	KTR7	P40504	517 aa		5.15	□□□□□ -1.59
SLX8	YER116C	MDJ2	P42834	146 aa		5.15	□□□□□ -1.59
SLX8	YER116C	YFR016C	P43597	1233 aa	Known RBP	5.15	□□□□□ -1.59
SLX8	YER116C	CLA4	P48562	842 aa		5.15	□□□□□ -1.59
SLX8	YER116C	ALD6	P54115	500 aa	Known RBP	5.15	□□□□□ -1.59
SLX8	YER116C	AGE1	Q04412	482 aa		5.15	□□□□□ -1.59
SLX8	YER116C	MGE1	P38523	228 aa		5.14	□□□□□ -1.59
SLX8	YER116C	PAC1	P39946	494 aa	Known RBP	5.14	□□□□□ -1.59
SLX8	YER116C	TUB4	P53378	473 aa		5.14	□□□□□ -1.59
SLX8	YER116C	YPL062W	Q02781	134 aa		5.14	□□□□□ -1.59
SLX8	YER116C	ERF2	Q06551	359 aa		5.14	□□□□□ -1.59
SLX8	YER116C	BRE1	Q07457	700 aa	Known RBP	5.14	□□□□□ -1.59
SLX8	YER116C	TRL1	P09880	827 aa	Known RBP	5.13	□□□□□ -1.59
SLX8	YER116C	ESS1	P22696	170 aa		5.13	□□□□□ -1.59
SLX8	YER116C	TPD3	P31383	635 aa		5.13	□□□□□ -1.59
SLX8	YER116C	TPS3	P38426	1054 aa	Known RBP	5.13	□□□□□ -1.59
SLX8	YER116C	ERP2	P39704	215 aa		5.13	□□□□□ -1.59
SLX8	YER116C	RIM21	P48565	533 aa		5.13	□□□□□ -1.59
SLX8	YER116C	TOA1	P32773	286 aa		5.12	□□□□□ -1.59
SLX8	YER116C	MPE1	P35728	441 aa	Known RBP	5.12	□□□□□ -1.59
SLX8	YER116C	GRX7	P38068	203 aa		5.12	□□□□□ -1.59
SLX8	YER116C	UBX7	P38349	436 aa		5.12	□□□□□ -1.59
SLX8	YER116C	NOP2	P40991	618 aa	Known RBP	5.12	□□□□□ -1.59
SLX8	YER116C	YJR107W	P47145	328 aa		5.12	□□□□□ -1.59
SLX8	YER116C	KXD1	P53158	218 aa		5.12	□□□□□ -1.59
SLX8	YER116C	NSE3	Q05541	303 aa		5.12	□□□□□ -1.59
SLX8	YER116C	YGR161W-C	Q3E744	92 aa		5.12	□□□□□ -1.59
SLX8	YER116C	KAR1	P11927	433 aa		5.11	□□□□□ -1.59
SLX8	YER116C	AFT1	P22149	690 aa		5.11	□□□□□ -1.59
SLX8	YER116C	VMA4	P22203	233 aa	Known RBP	5.11	□□□□□ -1.59
SLX8	YER116C	SCJ1	P25303	377 aa		5.11	□□□□□ -1.59
SLX8	YER116C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.11	□□□□□ -1.59	not detected
SLX8	YER116C	YJR142W	P47173	342 aa		5.11	□□□□□ -1.59
SLX8	YER116C	TMA64	Q04600	565 aa	Known RBP	5.11	□□□□□ -1.59
SLX8	YER116C	CDC53	Q12018	815 aa	Known RBP	5.11	□□□□□ -1.59
SLX8	YER116C	MNL2	Q12205	849 aa		5.11	□□□□□ -1.59
SLX8	YER116C	MMP1	Q12372	583 aa		5.11	□□□□□ -1.59
SLX8	YER116C	HIF1	Q12373	385 aa		5.11	□□□□□ -1.59
SLX8	YER116C	ARG8	P18544	423 aa		5.1	□□□□□ -1.59
SLX8	YER116C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
SLX8	YER116C	SPT5	P27692	1063 aa	Known RBP	5.1	□□□□□ -1.59
SLX8	YER116C	YJU3	P28321	313 aa		5.1	□□□□□ -1.59
SLX8	YER116C	ISW1	P38144	1129 aa		5.1	□□□□□ -1.59
SLX8	YER116C	MNN1	P39106	762 aa		5.1	□□□□□ -1.59
SLX8	YER116C	BOI2	P39969	1040 aa		5.1	□□□□□ -1.59
SLX8	YER116C	MAD1	P40957	749 aa		5.1	□□□□□ -1.59
SLX8	YER116C	DNM1	P54861	757 aa		5.1	□□□□□ -1.59
SLX8	YER116C	RPN4	Q03465	531 aa		5.1	□□□□□ -1.59
SLX8	YER116C	YMR196W	Q04336	1088 aa		5.1	□□□□□ -1.59
SLX8	YER116C	ENV9	Q08651	330 aa		5.1	□□□□□ -1.59
SLX8	YER116C	PEP12	P32854	288 aa		5.09	□□□□□ -1.59
SLX8	YER116C	RPT2	P40327	437 aa	Known RBP	5.09	□□□□□ -1.59
SLX8	YER116C	FYV10	P40492	516 aa		5.09	□□□□□ -1.59
SLX8	YER116C	HST2	P53686	357 aa		5.09	□□□□□ -1.59
SLX8	YER116C	FPK1	P53739	893 aa		5.09	□□□□□ -1.59
SLX8	YER116C	NIS1	P53939	407 aa		5.09	□□□□□ -1.59
SLX8	YER116C	GIR2	Q03768	265 aa	Predicted RBP	5.09	□□□□□ -1.59
SLX8	YER116C	WRS1	Q12109	432 aa	Known RBP	5.09	□□□□□ -1.59
SLX8	YER116C	YOR131C	Q12486	218 aa		5.09	□□□□□ -1.59
SLX8	YER116C	RAD2	P07276	1031 aa		5.08	□□□□□ -1.6
SLX8	YER116C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
SLX8	YER116C	SEC6	P32844	805 aa		5.08	□□□□□ -1.6
SLX8	YER116C	RRD1	P40454	393 aa	Known RBP	5.08	□□□□□ -1.6
SLX8	YER116C	RPS0B	P46654	252 aa	Known RBP	5.08	□□□□□ -1.6
SLX8	YER116C	HST3	P53687	447 aa		5.08	□□□□□ -1.6
SLX8	YER116C	CWC15	Q03772	175 aa	Known RBP	5.08	□□□□□ -1.6
SLX8	YER116C	GAL2	P13181	574 aa		5.07	□□□□□ -1.6
SLX8	YER116C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
SLX8	YER116C	ASH1	P34233	588 aa		5.07	□□□□□ -1.6
SLX8	YER116C	YEN1	P40028	759 aa		5.07	□□□□□ -1.6
SLX8	YER116C	BUD6	P41697	788 aa		5.07	□□□□□ -1.6
SLX8	YER116C	HXT10	P43581	546 aa		5.07	□□□□□ -1.6
SLX8	YER116C	YGL081W	P53156	320 aa		5.07	□□□□□ -1.6
SLX8	YER116C	VPS16	Q03308	798 aa		5.07	□□□□□ -1.6
SLX8	YER116C	NUT2	Q06213	157 aa		5.07	□□□□□ -1.6
SLX8	YER116C	MET32	Q12041	191 aa		5.07	□□□□□ -1.6
SLX8	YER116C	SSF2	Q12153	453 aa	Predicted RBP	5.07	□□□□□ -1.6
SLX8	YER116C	MET6	P05694	767 aa	Known RBP	5.06	□□□□□ -1.6
SLX8	YER116C	RDS2	P19541	446 aa	Known RBP	5.06	□□□□□ -1.6
SLX8	YER116C	GAR1	P28007	205 aa	Known RBP	5.06	□□□□□ -1.6
SLX8	YER116C	MCM2	P29469	868 aa		5.06	□□□□□ -1.6
SLX8	YER116C	MET22	P32179	357 aa		5.06	□□□□□ -1.6
SLX8	YER116C	MET4	P32389	672 aa		5.06	□□□□□ -1.6
SLX8	YER116C	UBP12	P39538	1254 aa		5.06	□□□□□ -1.6
SLX8	YER116C	NOC2	P39744	710 aa	Known RBP	5.06	□□□□□ -1.6
SLX8	YER116C	RTT106	P40161	455 aa		5.06	□□□□□ -1.6
SLX8	YER116C	YJL049W	P47048	450 aa		5.06	□□□□□ -1.6
SLX8	YER116C	ATG1	P53104	897 aa		5.06	□□□□□ -1.6
SLX8	YER116C	FRT1	Q99332	602 aa		5.06	□□□□□ -1.6
SLX8	YER116C	BOL3	P39724	118 aa		5.05	□□□□□ -1.6
SLX8	YER116C	VPS27	P40343	622 aa	Known RBP	5.05	□□□□□ -1.6
SLX8	YER116C	MSB3	P48566	633 aa	Predicted RBP	5.05	□□□□□ -1.6
SLX8	YER116C	SYH1	Q02875	849 aa	Known RBP	5.05	□□□□□ -1.6
SLX8	YER116C	ENT2	Q05785	613 aa		5.05	□□□□□ -1.6
SLX8	YER116C	COG4	Q06096	861 aa		5.05	□□□□□ -1.6
SLX8	YER116C	PIN2	Q12057	282 aa		5.05	□□□□□ -1.6
SLX8	YER116C	SLY41	P22215	453 aa		5.04	□□□□□ -1.6
SLX8	YER116C	TRX2	P22803	104 aa	Known RBP	5.04	□□□□□ -1.6
SLX8	YER116C	FUI1	P38196	639 aa		5.04	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms