RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C UGA2P38067 497 aa9.53□□□□□ -0.88
PUP3YER094C GTT3P39996 337 aa9.53□□□□□ -0.88
PUP3YER094C ALD3P54114 506 aa9.53□□□□□ -0.88
PUP3YER094C NMD2P38798 1089 aaKnown RBP9.52□□□□□ -0.89
PUP3YER094C HPC2Q01448 625 aa9.52□□□□□ -0.89
PUP3YER094C UBP12P39538 1254 aa9.51□□□□□ -0.89
PUP3YER094C FCP1Q03254 732 aa9.51□□□□□ -0.89
PUP3YER094C CTI6Q08923 506 aa9.51□□□□□ -0.89
PUP3YER094C GCD7P32502 381 aaPredicted RBP9.5□□□□□ -0.89
PUP3YER094C SET1P38827 1080 aaKnown RBP9.5□□□□□ -0.89
PUP3YER094C HGH1P48362 394 aaKnown RBP9.5□□□□□ -0.89
PUP3YER094C RAT1Q02792 1006 aaKnown RBP9.5□□□□□ -0.89
PUP3YER094C PSH1Q12161 406 aa9.5□□□□□ -0.89
PUP3YER094C ITC1P53125 1264 aa9.49□□□□□ -0.89
PUP3YER094C RIX7Q07844 837 aaKnown RBP9.49□□□□□ -0.89
PUP3YER094C HAT1Q12341 374 aa9.48□□□□□ -0.89
PUP3YER094C SSK22P25390 1331 aaPredicted RBP9.48□□□□□ -0.89
PUP3YER094C SUP35P05453 685 aaKnown RBP9.47□□□□□ -0.89
PUP3YER094C TOS1P38288 455 aa9.47□□□□□ -0.89
PUP3YER094C BDP1P46678 594 aa9.47□□□□□ -0.89
PUP3YER094C ECM16Q04217 1267 aaKnown RBP9.47□□□□□ -0.89
PUP3YER094C RPC31P17890 251 aa9.46□□□□□ -0.9
PUP3YER094C SSF1P38789 453 aaPredicted RBP9.46□□□□□ -0.9
PUP3YER094C MTC5Q03897 1148 aa9.46□□□□□ -0.9
PUP3YER094C NCB2Q92317 146 aa9.46□□□□□ -0.9
PUP3YER094C DIB1Q06819 143 aaPredicted RBP9.45□□□□□ -0.9
PUP3YER094C RFC1P38630 861 aaKnown RBP9.44□□□□□ -0.9
PUP3YER094C HXT10P43581 546 aa9.44□□□□□ -0.9
PUP3YER094C NKP2Q06162 153 aa9.44□□□□□ -0.9
PUP3YER094C SAC3P46674 1301 aa9.44□□□□□ -0.9
PUP3YER094C BDF2Q07442 638 aa9.43□□□□□ -0.9
PUP3YER094C SNU66Q12420 587 aaPredicted RBP9.43□□□□□ -0.9
PUP3YER094C PMD1P32634 1753 aa9.42□□□□□ -0.9
PUP3YER094C SLA1P32790 1244 aa9.42□□□□□ -0.9
PUP3YER094C IRC3Q06683 689 aa9.42□□□□□ -0.9
PUP3YER094C RAD50P12753 1312 aa9.41□□□□□ -0.9
PUP3YER094C PDR18P53756 1333 aa9.4□□□□□ -0.9
PUP3YER094C CDC16P09798 840 aa9.38□□□□□ -0.91
PUP3YER094C MSN5P52918 1224 aa9.38□□□□□ -0.91
PUP3YER094C SAS4Q04003 481 aa9.38□□□□□ -0.91
PUP3YER094C GYP5Q12344 894 aa9.38□□□□□ -0.91
PUP3YER094C NOT3P06102 836 aaKnown RBP9.37□□□□□ -0.91
PUP3YER094C ECM21P38167 1117 aaKnown RBP9.37□□□□□ -0.91
PUP3YER094C PFF1P38244 976 aa9.37□□□□□ -0.91
PUP3YER094C RPN1P38764 993 aaKnown RBP9.37□□□□□ -0.91
PUP3YER094C MLC1P53141 149 aa9.37□□□□□ -0.91
PUP3YER094C UBP16Q02863 499 aa9.37□□□□□ -0.91
PUP3YER094C SYF1Q04048 859 aaPredicted RBP9.37□□□□□ -0.91
PUP3YER094C DPH6Q12429 685 aa9.37□□□□□ -0.91
PUP3YER094C DUR1,2P32528 1835 aaKnown RBP9.36□□□□□ -0.91
PUP3YER094C CAF20P12962 161 aaKnown RBP9.36□□□□□ -0.91
PUP3YER094C FRD1P32614 470 aaKnown RBP9.36□□□□□ -0.91
PUP3YER094C NGR1P32831 672 aaKnown RBP9.36□□□□□ -0.91
PUP3YER094C YGL242CP53066 181 aa9.36□□□□□ -0.91
PUP3YER094C SMY1P32364 656 aaKnown RBP9.35□□□□□ -0.91
PUP3YER094C RMD1Q03441 430 aa9.35□□□□□ -0.91
PUP3YER094C THI3Q07471 609 aa9.35□□□□□ -0.91
PUP3YER094C SEC18P18759 758 aaKnown RBP9.34□□□□□ -0.91
PUP3YER094C SRC1Q03707 834 aa9.34□□□□□ -0.91
PUP3YER094C RRI2Q12348 645 aa9.34□□□□□ -0.91
PUP3YER094C ADR1P07248 1323 aa9.33□□□□□ -0.92
PUP3YER094C POM152P39685 1337 aa9.33□□□□□ -0.92
PUP3YER094C AI2P03876 854 aa9.33□□□□□ -0.92
PUP3YER094C VAS1P07806 1104 aaKnown RBP9.33□□□□□ -0.92
PUP3YER094C MGM1P32266 881 aa9.33□□□□□ -0.92
PUP3YER094C YKL222CP35995 705 aa9.33□□□□□ -0.92
PUP3YER094C EAF6P47128 113 aa9.33□□□□□ -0.92
PUP3YER094C YNL193WP53870 558 aa9.33□□□□□ -0.92
PUP3YER094C BRE1Q07457 700 aaKnown RBP9.33□□□□□ -0.92
PUP3YER094C SIT4P20604 311 aa9.32□□□□□ -0.92
PUP3YER094C KTR3P38130 404 aaPredicted RBP9.32□□□□□ -0.92
PUP3YER094C ERT1P38140 529 aa9.32□□□□□ -0.92
PUP3YER094C ICP55P40051 511 aa9.32□□□□□ -0.92
PUP3YER094C CWH41P53008 833 aa9.32□□□□□ -0.92
PUP3YER094C ALO1P54783 526 aaKnown RBP9.32□□□□□ -0.92
PUP3YER094C ERO1Q03103 563 aa9.32□□□□□ -0.92
PUP3YER094C RPN7Q06103 429 aaKnown RBP9.32□□□□□ -0.92
PUP3YER094C BRN1P38170 754 aa9.31□□□□□ -0.92
PUP3YER094C CTT1P06115 562 aa9.3□□□□□ -0.92
PUP3YER094C RPT4P53549 437 aaKnown RBP9.3□□□□□ -0.92
PUP3YER094C GCR2Q01722 534 aa9.3□□□□□ -0.92
PUP3YER094C PIF1P07271 859 aa9.29□□□□□ -0.92
PUP3YER094C DLD1P32891 587 aa9.29□□□□□ -0.92
PUP3YER094C PBY1P38254 753 aa9.29□□□□□ -0.92
PUP3YER094C YER156CP40093 338 aaKnown RBP9.29□□□□□ -0.92
PUP3YER094C MRPS35P53292 345 aa9.29□□□□□ -0.92
PUP3YER094C FAS2P19097 1887 aaKnown RBP9.29□□□□□ -0.92
PUP3YER094C HKR1P41809 1802 aa9.28□□□□□ -0.92
PUP3YER094C FIG2P25653 1609 aa9.28□□□□□ -0.92
PUP3YER094C STM1P39015 273 aaKnown RBP9.28□□□□□ -0.92
PUP3YER094C NUG1P40010 520 aaKnown RBP9.28□□□□□ -0.92
PUP3YER094C EPS1P40557 701 aa9.28□□□□□ -0.92
PUP3YER094C UBX2Q04228 584 aa9.28□□□□□ -0.92
PUP3YER094C FPR4Q06205 392 aaPredicted RBP9.28□□□□□ -0.92
PUP3YER094C GRX6Q12438 231 aa9.28□□□□□ -0.92
PUP3YER094C KRE2P27809 442 aa9.27□□□□□ -0.93
PUP3YER094C SPL2P38839 148 aa9.27□□□□□ -0.93
PUP3YER094C RIM20Q12033 661 aa9.27□□□□□ -0.93
PUP3YER094C KTR1P27810 393 aaKnown RBP9.26□□□□□ -0.93
PUP3YER094C OSH3P38713 996 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 94.1 ms