RNA–Protein interactions for RNA: YDR280W

RRP45, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP45, Length 918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP45YDR280W YLR271WQ06152 274 aa7.02□□□□□ -1.29
RRP45YDR280W GAS4Q08271 471 aa7.02□□□□□ -1.29
RRP45YDR280W LDB19Q12502 818 aa7.02□□□□□ -1.29
RRP45YDR280W UTP10P42945 1769 aaKnown RBP7.02□□□□□ -1.29
RRP45YDR280W KIP3P53086 805 aaKnown RBP7.01□□□□□ -1.29
RRP45YDR280W PMD1P32634 1753 aa7□□□□□ -1.29
RRP45YDR280W FET4P40988 552 aa7□□□□□ -1.29
RRP45YDR280W HVG1P0CE11 249 aa6.99□□□□□ -1.29
RRP45YDR280W GLC3P32775 704 aa6.99□□□□□ -1.29
RRP45YDR280W BSD2P38356 321 aa6.99□□□□□ -1.29
RRP45YDR280W TIM50Q02776 476 aa6.99□□□□□ -1.29
RRP45YDR280W LPD1P09624 499 aaKnown RBP6.98□□□□□ -1.29
RRP45YDR280W MSM1P22438 575 aa6.98□□□□□ -1.29
RRP45YDR280W YVH1Q02256 364 aaKnown RBP6.98□□□□□ -1.29
RRP45YDR280W IRC3Q06683 689 aa6.98□□□□□ -1.29
RRP45YDR280W GRX6Q12438 231 aa6.98□□□□□ -1.29
RRP45YDR280W GAP1P19145 602 aaPredicted RBP6.97□□□□□ -1.29
RRP45YDR280W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
RRP45YDR280W SIT4P20604 311 aa6.96□□□□□ -1.3
RRP45YDR280W RAT1Q02792 1006 aaKnown RBP6.96□□□□□ -1.3
RRP45YDR280W CWC15Q03772 175 aaKnown RBP6.96□□□□□ -1.3
RRP45YDR280W BDF2Q07442 638 aa6.96□□□□□ -1.3
RRP45YDR280W TOR1P35169 2470 aa6.95□□□□□ -1.3
RRP45YDR280W EMP47P43555 445 aa6.95□□□□□ -1.3
RRP45YDR280W TEA1P47988 759 aa6.95□□□□□ -1.3
RRP45YDR280W RTF1P53064 558 aa6.95□□□□□ -1.3
RRP45YDR280W CST9Q06032 482 aa6.95□□□□□ -1.3
RRP45YDR280W AIM7Q12156 149 aa6.95□□□□□ -1.3
RRP45YDR280W SEC3P33332 1336 aaKnown RBP6.95□□□□□ -1.3
RRP45YDR280W PDI1P17967 522 aaKnown RBP6.94□□□□□ -1.3
RRP45YDR280W BUD27P43573 796 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
RRP45YDR280W GSC2P40989 1895 aa6.94□□□□□ -1.3
RRP45YDR280W MRM1P25270 412 aa6.93□□□□□ -1.3
RRP45YDR280W MOT2P34909 587 aaKnown RBP6.93□□□□□ -1.3
RRP45YDR280W HKR1P41809 1802 aa6.92□□□□□ -1.3
RRP45YDR280W YGR117CP53270 476 aa6.92□□□□□ -1.3
RRP45YDR280W MDG1P53885 366 aa6.92□□□□□ -1.3
RRP45YDR280W DIB1Q06819 143 aaPredicted RBP6.92□□□□□ -1.3
RRP45YDR280W CSR2Q12734 1121 aa6.92□□□□□ -1.3
RRP45YDR280W NUP145P49687 1317 aa6.92□□□□□ -1.3
RRP45YDR280W CAF20P12962 161 aaKnown RBP6.91□□□□□ -1.3
RRP45YDR280W RSC30P38781 883 aa6.91□□□□□ -1.3
RRP45YDR280W DPL1Q05567 589 aa6.91□□□□□ -1.3
RRP45YDR280W SEC61P32915 480 aa6.9□□□□□ -1.3
RRP45YDR280W SER1P33330 395 aaKnown RBP6.9□□□□□ -1.3
RRP45YDR280W YMR1P47147 688 aaKnown RBP RIP-Chip data6.9□□□□□ -1.3not detected
RRP45YDR280W NCR1Q12200 1170 aa6.9□□□□□ -1.3
RRP45YDR280W AUS1Q08409 1394 aa6.9□□□□□ -1.31
RRP45YDR280W MLP1Q02455 1875 aaKnown RBP6.9□□□□□ -1.31
RRP45YDR280W GRX4P32642 244 aa6.89□□□□□ -1.31
RRP45YDR280W APE3P37302 537 aaKnown RBP6.89□□□□□ -1.31
RRP45YDR280W PCS60P38137 543 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
RRP45YDR280W SSP1P38871 571 aa6.89□□□□□ -1.31
RRP45YDR280W RMT2Q03305 412 aa6.89□□□□□ -1.31
RRP45YDR280W PHM7Q12252 991 aa6.89□□□□□ -1.31
RRP45YDR280W YFR016CP43597 1233 aaKnown RBP6.88□□□□□ -1.31
RRP45YDR280W RRT6P53117 311 aaPredicted RBP6.88□□□□□ -1.31
RRP45YDR280W YNL035CP53962 389 aaKnown RBP6.88□□□□□ -1.31
RRP45YDR280W TRM44Q02648 567 aaKnown RBP6.88□□□□□ -1.31
RRP45YDR280W YOL036WQ08206 761 aa6.88□□□□□ -1.31
RRP45YDR280W RTG1P32607 177 aa6.87□□□□□ -1.31
RRP45YDR280W NOP53Q12080 455 aaKnown RBP6.87□□□□□ -1.31
RRP45YDR280W FBP1P09201 348 aa6.86□□□□□ -1.31
RRP45YDR280W CTF4Q01454 927 aa6.86□□□□□ -1.31
RRP45YDR280W UBP16Q02863 499 aa6.86□□□□□ -1.31
RRP45YDR280W TAP42Q04372 366 aa6.86□□□□□ -1.31
RRP45YDR280W LYS2P07702 1392 aa6.85□□□□□ -1.31
RRP45YDR280W TRP5P00931 707 aaKnown RBP6.85□□□□□ -1.31
RRP45YDR280W RTG3P38165 486 aa6.85□□□□□ -1.31
RRP45YDR280W TFG1P41895 735 aaPredicted RBP6.85□□□□□ -1.31
RRP45YDR280W CLA4P48562 842 aa6.85□□□□□ -1.31
RRP45YDR280W VPS4P52917 437 aa6.85□□□□□ -1.31
RRP45YDR280W SAM3Q08986 587 aa6.85□□□□□ -1.31
RRP45YDR280W TOR2P32600 2474 aaKnown RBP6.84□□□□□ -1.31
RRP45YDR280W HPR1P17629 752 aaKnown RBP6.84□□□□□ -1.31
RRP45YDR280W SCT1P32784 759 aa6.84□□□□□ -1.31
RRP45YDR280W DLD1P32891 587 aa6.84□□□□□ -1.31
RRP45YDR280W PNT1P38969 423 aa6.84□□□□□ -1.31
RRP45YDR280W SAS4Q04003 481 aa6.84□□□□□ -1.31
RRP45YDR280W HSP104P31539 908 aaKnown RBP6.83□□□□□ -1.32
RRP45YDR280W SET4P42948 560 aa6.83□□□□□ -1.32
RRP45YDR280W YGL082WP53155 381 aa6.83□□□□□ -1.32
RRP45YDR280W RBA50Q04418 439 aa6.83□□□□□ -1.32
RRP45YDR280W DBP1P24784 617 aaKnown RBP6.82□□□□□ -1.32
RRP45YDR280W STV1P37296 890 aa6.82□□□□□ -1.32
RRP45YDR280W VPS29P38759 282 aa6.82□□□□□ -1.32
RRP45YDR280W RPN1P38764 993 aaKnown RBP6.82□□□□□ -1.32
RRP45YDR280W CRF1Q04930 467 aa6.82□□□□□ -1.32
RRP45YDR280W FRD1P32614 470 aaKnown RBP6.81□□□□□ -1.32
RRP45YDR280W MGA2P40578 1113 aa6.81□□□□□ -1.32
RRP45YDR280W DSD1P53095 428 aa6.81□□□□□ -1.32
RRP45YDR280W EAR1Q03212 550 aa6.81□□□□□ -1.32
RRP45YDR280W JIP4Q03361 876 aa6.81□□□□□ -1.32
RRP45YDR280W SYF1Q04048 859 aaPredicted RBP6.81□□□□□ -1.32
RRP45YDR280W NUM1Q00402 2748 aa6.81□□□□□ -1.32
RRP45YDR280W VMA1P17255 1071 aaKnown RBP6.8□□□□□ -1.32
RRP45YDR280W HIM1Q06674 414 aa6.8□□□□□ -1.32
RRP45YDR280W YMR084WA2P2R3 262 aa6.79□□□□□ -1.32
RRP45YDR280W SGD1Q06132 899 aa6.79□□□□□ -1.32
RRP45YDR280W PAH1P32567 862 aa6.78□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms