RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C AOS1Q06624 347 aa2.58□□□□□ -2
BRE1YDL074C GAS4Q08271 471 aa2.58□□□□□ -2
BRE1YDL074C GYP1Q08484 637 aa2.58□□□□□ -2
BRE1YDL074C PRP5P21372 849 aaPredicted RBP2.57□□□□□ -2
BRE1YDL074C HGH1P48362 394 aaKnown RBP2.57□□□□□ -2
BRE1YDL074C DSD1P53095 428 aa2.57□□□□□ -2
BRE1YDL074C RRP46P53256 223 aaPredicted RBP2.57□□□□□ -2
BRE1YDL074C THI22Q06490 572 aa2.57□□□□□ -2
BRE1YDL074C NOP8Q08287 484 aaPredicted RBP2.57□□□□□ -2
BRE1YDL074C LYS2P07702 1392 aa2.57□□□□□ -2
BRE1YDL074C URB1P34241 1764 aaKnown RBP2.57□□□□□ -2
BRE1YDL074C YIL092WP40497 633 aa2.57□□□□□ -2
BRE1YDL074C THI12P42883 340 aa2.57□□□□□ -2
BRE1YDL074C THI5P43534 340 aa2.57□□□□□ -2
BRE1YDL074C THI11P47183 340 aa2.57□□□□□ -2
BRE1YDL074C HEF3P53978 1044 aaKnown RBP2.57□□□□□ -2
BRE1YDL074C MEC3Q02574 474 aa2.57□□□□□ -2
BRE1YDL074C THI13Q07748 340 aa2.57□□□□□ -2
BRE1YDL074C RRP5Q05022 1729 aaKnown RBP2.57□□□□□ -2
BRE1YDL074C DAL5P15365 543 aa2.56□□□□□ -2
BRE1YDL074C MIF2P35201 549 aa2.56□□□□□ -2
BRE1YDL074C YIR014WP40570 242 aa2.56□□□□□ -2
BRE1YDL074C BUB1P41695 1021 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
BRE1YDL074C YPP1P46951 817 aa2.56□□□□□ -2
BRE1YDL074C RTT109Q07794 436 aa2.56□□□□□ -2
BRE1YDL074C SLM3Q12093 417 aa2.56□□□□□ -2
BRE1YDL074C ARP8Q12386 881 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
BRE1YDL074C TCB1Q12466 1186 aa2.56□□□□□ -2
BRE1YDL074C KCC4P25389 1037 aa2.56□□□□□ -2
BRE1YDL074C HSP104P31539 908 aaKnown RBP2.56□□□□□ -2
BRE1YDL074C NTH2P35172 780 aa2.56□□□□□ -2
BRE1YDL074C RRT14P40470 206 aa2.56□□□□□ -2
BRE1YDL074C POL32P47110 350 aa2.56□□□□□ -2
BRE1YDL074C PRP45P28004 379 aaPredicted RBP2.55□□□□□ -2
BRE1YDL074C PTC3P34221 468 aaKnown RBP2.55□□□□□ -2
BRE1YDL074C MGA2P40578 1113 aa2.55□□□□□ -2
BRE1YDL074C PUF6Q04373 656 aaKnown RBP2.55□□□□□ -2
BRE1YDL074C SUP35P05453 685 aaKnown RBP2.54□□□□□ -2
BRE1YDL074C FUN12P39730 1002 aaKnown RBP2.54□□□□□ -2
BRE1YDL074C MDG1P53885 366 aa2.54□□□□□ -2
BRE1YDL074C RSF2P46974 1380 aa2.54□□□□□ -2
BRE1YDL074C RPS19AP07280 144 aaKnown RBP2.54□□□□□ -2
BRE1YDL074C RPS19BP07281 144 aaPredicted RBP2.54□□□□□ -2
BRE1YDL074C YNG2P38806 282 aaKnown RBP2.54□□□□□ -2
BRE1YDL074C XKS1P42826 600 aa2.54□□□□□ -2
BRE1YDL074C SRT1Q03175 343 aa2.54□□□□□ -2
BRE1YDL074C BMS1Q08965 1183 aaKnown RBP2.54□□□□□ -2
BRE1YDL074C YEL077CQ3E7X8 1277 aa2.54□□□□□ -2
BRE1YDL074C RAD50P12753 1312 aa2.53□□□□□ -2
BRE1YDL074C YIL177CP40434 1758 aa2.53□□□□□ -2
BRE1YDL074C YJL225CP40889 1758 aa2.53□□□□□ -2
BRE1YDL074C VPS24P36095 224 aaKnown RBP2.53□□□□□ -2
BRE1YDL074C EDS1P38073 919 aa2.53□□□□□ -2
BRE1YDL074C DNM1P54861 757 aa2.53□□□□□ -2
BRE1YDL074C YOL057WQ08225 711 aa2.53□□□□□ -2
BRE1YDL074C NCB2Q92317 146 aa2.53□□□□□ -2
BRE1YDL074C MRP7P12687 371 aa2.53□□□□□ -2.01
BRE1YDL074C TPM1P17536 199 aaKnown RBP2.53□□□□□ -2.01
BRE1YDL074C SSF1P38789 453 aaPredicted RBP2.53□□□□□ -2.01
BRE1YDL074C NMD2P38798 1089 aaKnown RBP2.53□□□□□ -2.01
BRE1YDL074C SAS4Q04003 481 aa2.53□□□□□ -2.01
BRE1YDL074C COG8Q04632 607 aa2.53□□□□□ -2.01
BRE1YDL074C DPL1Q05567 589 aa2.53□□□□□ -2.01
BRE1YDL074C ATG13Q06628 738 aa2.53□□□□□ -2.01
BRE1YDL074C LSP1Q12230 341 aaKnown RBP2.53□□□□□ -2.01
BRE1YDL074C ROM2P51862 1356 aaKnown RBP2.52□□□□□ -2.01
BRE1YDL074C COQ4O13525 335 aa2.52□□□□□ -2.01
BRE1YDL074C CLC1P17891 233 aa2.52□□□□□ -2.01
BRE1YDL074C AIR1P40507 360 aaKnown RBP2.52□□□□□ -2.01
BRE1YDL074C CST6P40535 587 aa2.52□□□□□ -2.01
BRE1YDL074C MSB3P48566 633 aaPredicted RBP2.52□□□□□ -2.01
BRE1YDL074C RMT2Q03305 412 aa2.52□□□□□ -2.01
BRE1YDL074C SSP2Q08646 371 aa2.52□□□□□ -2.01
BRE1YDL074C YRF1-3P0CX14 1859 aa2.52□□□□□ -2.01
BRE1YDL074C YRF1-7P0CX15 1859 aa2.52□□□□□ -2.01
BRE1YDL074C YRF1-6P53819 1859 aa2.52□□□□□ -2.01
BRE1YDL074C NUP145P49687 1317 aa2.52□□□□□ -2.01
BRE1YDL074C GCD7P32502 381 aaPredicted RBP2.51□□□□□ -2.01
BRE1YDL074C IME2P32581 645 aa2.51□□□□□ -2.01
BRE1YDL074C IES2P40154 320 aa2.51□□□□□ -2.01
BRE1YDL074C CSI1Q04368 295 aa2.51□□□□□ -2.01
BRE1YDL074C RAD4P14736 754 aa2.51□□□□□ -2.01
BRE1YDL074C GRX1P25373 110 aaKnown RBP2.51□□□□□ -2.01
BRE1YDL074C MET22P32179 357 aa2.51□□□□□ -2.01
BRE1YDL074C YBR287WP38355 427 aa2.51□□□□□ -2.01
BRE1YDL074C RFC1P38630 861 aaKnown RBP2.51□□□□□ -2.01
BRE1YDL074C YBP2P53169 641 aa2.51□□□□□ -2.01
BRE1YDL074C SPO1P53541 631 aa2.51□□□□□ -2.01
BRE1YDL074C NKP2Q06162 153 aa2.51□□□□□ -2.01
BRE1YDL074C INP54Q08227 384 aaKnown RBP2.51□□□□□ -2.01
BRE1YDL074C YKL133CP36066 463 aa2.5□□□□□ -2.01
BRE1YDL074C OPY1P38271 328 aa2.5□□□□□ -2.01
BRE1YDL074C SNF7P39929 240 aaKnown RBP2.5□□□□□ -2.01
BRE1YDL074C BDP1P46678 594 aa2.5□□□□□ -2.01
BRE1YDL074C YJR008WP47085 338 aa2.5□□□□□ -2.01
BRE1YDL074C ITC1P53125 1264 aa2.5□□□□□ -2.01
BRE1YDL074C YPR148CQ06523 435 aa2.5□□□□□ -2.01
BRE1YDL074C YDR306CQ06640 478 aa2.5□□□□□ -2.01
BRE1YDL074C LAM6Q08001 693 aa2.5□□□□□ -2.01
BRE1YDL074C ENT1Q12518 454 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 47.2 ms