RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W UBP15P50101 1230 aa8.52□□□□□ -1.05
RER1YCL001W RDS2P19541 446 aaKnown RBP8.51□□□□□ -1.05
RER1YCL001W SUM1P46676 1062 aa8.51□□□□□ -1.05
RER1YCL001W CUZ1P53899 274 aa8.51□□□□□ -1.05
RER1YCL001W TY1A-DR3Q12441 440 aa8.51□□□□□ -1.05
RER1YCL001W UTP7P40055 554 aaKnown RBP8.5□□□□□ -1.05
RER1YCL001W AHP1P38013 176 aaKnown RBP8.49□□□□□ -1.05
RER1YCL001W BIM1P40013 344 aa8.49□□□□□ -1.05
RER1YCL001W ATG32P40458 529 aa8.48□□□□□ -1.05
RER1YCL001W LEO1P38439 464 aa8.47□□□□□ -1.05
RER1YCL001W MRX10Q05648 414 aa8.47□□□□□ -1.05
RER1YCL001W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05not detected
RER1YCL001W PHM7Q12252 991 aa8.47□□□□□ -1.05
RER1YCL001W LSB3P43603 459 aaKnown RBP8.46□□□□□ -1.06
RER1YCL001W TIF1P10081 395 aaKnown RBP8.45□□□□□ -1.06
RER1YCL001W DIT1P21623 536 aa8.45□□□□□ -1.06
RER1YCL001W CEM1P39525 442 aa8.45□□□□□ -1.06
RER1YCL001W JJJ2P46997 583 aa8.45□□□□□ -1.06
RER1YCL001W ENO1P00924 437 aaKnown RBP8.44□□□□□ -1.06
RER1YCL001W ALA1P40825 983 aaKnown RBP8.44□□□□□ -1.06
RER1YCL001W AIM9P40053 627 aaKnown RBP8.42□□□□□ -1.06
RER1YCL001W YMR265CQ03508 461 aaKnown RBP8.42□□□□□ -1.06
RER1YCL001W TCB3Q03640 1545 aaKnown RBP8.41□□□□□ -1.06
RER1YCL001W SWI5P08153 709 aa8.41□□□□□ -1.06
RER1YCL001W IRE1P32361 1115 aa8.41□□□□□ -1.06
RER1YCL001W RTG2P32608 588 aaKnown RBP8.41□□□□□ -1.06
RER1YCL001W RPL34BP40525 121 aaKnown RBP8.41□□□□□ -1.06
RER1YCL001W YPQ2Q06328 317 aa8.41□□□□□ -1.06
RER1YCL001W SYT1Q06836 1226 aa8.41□□□□□ -1.06
RER1YCL001W SHM1P37292 490 aaPredicted RBP8.4□□□□□ -1.06
RER1YCL001W YFL034WP43564 1073 aa8.4□□□□□ -1.06
RER1YCL001W YDR461C-AQ2V2P7 80 aa8.39□□□□□ -1.07
RER1YCL001W RPS6AP0CX37 236 aaKnown RBP8.37□□□□□ -1.07
RER1YCL001W RPS6BP0CX38 236 aaPredicted RBP8.37□□□□□ -1.07
RER1YCL001W PEP12P32854 288 aa8.37□□□□□ -1.07
RER1YCL001W KRE33P53914 1056 aaKnown RBP8.37□□□□□ -1.07
RER1YCL001W SGS1P35187 1447 aa8.37□□□□□ -1.07
RER1YCL001W MDJ1P35191 511 aa8.35□□□□□ -1.07
RER1YCL001W ADE12P80210 433 aaKnown RBP8.35□□□□□ -1.07
RER1YCL001W TY1B-DR4Q07793 1604 aa8.34□□□□□ -1.07
RER1YCL001W MCM1P11746 286 aa8.34□□□□□ -1.07
RER1YCL001W PDC6P26263 563 aaKnown RBP8.34□□□□□ -1.07
RER1YCL001W NTH2P35172 780 aa8.34□□□□□ -1.07
RER1YCL001W PSH1Q12161 406 aa8.34□□□□□ -1.07
RER1YCL001W SWR1Q05471 1514 aa8.34□□□□□ -1.08
RER1YCL001W AI1P03875 834 aa8.33□□□□□ -1.08
RER1YCL001W NSG2P53898 299 aa8.33□□□□□ -1.08
RER1YCL001W TSC13Q99190 310 aa8.33□□□□□ -1.08
RER1YCL001W RPS31P05759 152 aaKnown RBP8.32□□□□□ -1.08
RER1YCL001W PDI1P17967 522 aaKnown RBP8.32□□□□□ -1.08
RER1YCL001W YFL066CP43538 392 aa8.3□□□□□ -1.08
RER1YCL001W MRPL16P38064 232 aa8.29□□□□□ -1.08
RER1YCL001W THI72Q08579 599 aa8.29□□□□□ -1.08
RER1YCL001W LEU1P07264 779 aaKnown RBP8.28□□□□□ -1.08
RER1YCL001W SIS2P36024 562 aa8.28□□□□□ -1.08
RER1YCL001W CYT1P07143 309 aa8.27□□□□□ -1.09
RER1YCL001W FPS1P23900 669 aa8.27□□□□□ -1.09
RER1YCL001W YNL165WP53891 406 aa8.27□□□□□ -1.09
RER1YCL001W STB3Q12427 513 aa8.27□□□□□ -1.09
RER1YCL001W PHO87P25360 923 aa8.26□□□□□ -1.09
RER1YCL001W SPR3P41901 512 aa8.25□□□□□ -1.09
RER1YCL001W ALD2P47771 506 aa8.25□□□□□ -1.09
RER1YCL001W ACS2P52910 683 aaKnown RBP8.25□□□□□ -1.09
RER1YCL001W DNA2P38859 1522 aa8.24□□□□□ -1.09
RER1YCL001W KTR7P40504 517 aa8.24□□□□□ -1.09
RER1YCL001W GPM1P00950 247 aaKnown RBP8.23□□□□□ -1.09
RER1YCL001W HAP4P14064 554 aa8.23□□□□□ -1.09
RER1YCL001W YTA6P40328 754 aa8.23□□□□□ -1.09
RER1YCL001W NRD1P53617 575 aaKnown RBP RIP-Chip data8.23□□□□□ -1.09not detected
RER1YCL001W UBP1P25037 809 aa8.22□□□□□ -1.09
RER1YCL001W GAS4Q08271 471 aa8.22□□□□□ -1.09
RER1YCL001W RGP1P16664 663 aa8.21□□□□□ -1.1
RER1YCL001W MLF3P32047 452 aa8.21□□□□□ -1.1
RER1YCL001W CCT8P47079 568 aaKnown RBP8.21□□□□□ -1.1
RER1YCL001W RPP1AP05318 106 aaPredicted RBP8.2□□□□□ -1.1
RER1YCL001W SBE2P42223 864 aaKnown RBP8.2□□□□□ -1.1
RER1YCL001W DMA2P53924 522 aa8.2□□□□□ -1.1
RER1YCL001W Q0182Q9ZZW1 134 aa8.2□□□□□ -1.1
RER1YCL001W GAL2P13181 574 aa8.18□□□□□ -1.1
RER1YCL001W TY1A-DR2Q03964 440 aaKnown RBP8.18□□□□□ -1.1
RER1YCL001W YPR053CQ6Q5F3 151 aa8.18□□□□□ -1.1
RER1YCL001W TDA6Q06466 467 aa8.17□□□□□ -1.1
RER1YCL001W UTP4Q06679 776 aaKnown RBP8.17□□□□□ -1.1
RER1YCL001W KOG1P38873 1557 aa8.17□□□□□ -1.1
RER1YCL001W KNS1P32350 737 aaPredicted RBP8.16□□□□□ -1.1
RER1YCL001W TTI1P36097 1038 aa8.16□□□□□ -1.1
RER1YCL001W MSC7P38694 644 aa8.16□□□□□ -1.1
RER1YCL001W ROM1P53046 1155 aa8.16□□□□□ -1.1
RER1YCL001W PDC5P16467 563 aaKnown RBP8.15□□□□□ -1.1
RER1YCL001W NGR1P32831 672 aaKnown RBP8.15□□□□□ -1.1
RER1YCL001W SCD5P34758 872 aa8.15□□□□□ -1.1
RER1YCL001W TGL4P36165 910 aa8.14□□□□□ -1.11
RER1YCL001W YNR014WP53719 212 aa8.14□□□□□ -1.11
RER1YCL001W MCX1P38323 520 aaPredicted RBP8.13□□□□□ -1.11
RER1YCL001W HXT5P38695 592 aa8.13□□□□□ -1.11
RER1YCL001W MET1P36150 593 aa8.11□□□□□ -1.11
RER1YCL001W SKN7P38889 622 aa8.11□□□□□ -1.11
RER1YCL001W SKP1P52286 194 aa8.11□□□□□ -1.11
RER1YCL001W MTO1P53070 669 aa8.11□□□□□ -1.11
RER1YCL001W YMR187CQ03236 431 aa8.11□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms