RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeastyeast

Gene PRE7, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE7YBL041W GLN1P32288 370 aaKnown RBP7.96□□□□□ -1.14
PRE7YBL041W NUP157P40064 1391 aaKnown RBP7.96□□□□□ -1.14
PRE7YBL041W KTR1P27810 393 aaKnown RBP7.95□□□□□ -1.14
PRE7YBL041W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
PRE7YBL041W YJR115WP47152 169 aa7.95□□□□□ -1.14
PRE7YBL041W BUD3P25558 1636 aa7.94□□□□□ -1.14
PRE7YBL041W PDR10P51533 1564 aa7.93□□□□□ -1.14
PRE7YBL041W YDR444WQ04093 687 aa7.93□□□□□ -1.14
PRE7YBL041W TAF7Q05021 590 aa7.92□□□□□ -1.14
PRE7YBL041W GBP2P25555 427 aaKnown RBP RIP-Chip data7.91□□□□□ -1.14not detected
PRE7YBL041W LCB5Q06147 687 aaKnown RBP7.91□□□□□ -1.14
PRE7YBL041W KIP2P28743 706 aa7.9□□□□□ -1.14
PRE7YBL041W MSB3P48566 633 aaPredicted RBP7.9□□□□□ -1.14
PRE7YBL041W AIM7Q12156 149 aa7.9□□□□□ -1.14
PRE7YBL041W RSC30P38781 883 aa7.89□□□□□ -1.15
PRE7YBL041W IXR1P33417 597 aa7.88□□□□□ -1.15
PRE7YBL041W PKH3Q03306 898 aaPredicted RBP7.87□□□□□ -1.15
PRE7YBL041W YDL176WQ12027 708 aa7.87□□□□□ -1.15
PRE7YBL041W MRT4P33201 236 aaKnown RBP7.86□□□□□ -1.15
PRE7YBL041W CHC1P22137 1653 aaKnown RBP7.86□□□□□ -1.15
PRE7YBL041W ARO1P08566 1588 aaKnown RBP7.85□□□□□ -1.15
PRE7YBL041W SEC7P11075 2009 aaKnown RBP7.85□□□□□ -1.15
PRE7YBL041W CAT8P39113 1433 aa7.85□□□□□ -1.15
PRE7YBL041W YOR093CQ12275 1648 aa7.85□□□□□ -1.15
PRE7YBL041W VAC17P25591 423 aa7.84□□□□□ -1.15
PRE7YBL041W PTK2P47116 818 aaKnown RBP7.84□□□□□ -1.15
PRE7YBL041W GEA1P47102 1408 aaPredicted RBP7.84□□□□□ -1.15
PRE7YBL041W UGA3P26370 528 aa7.83□□□□□ -1.16
PRE7YBL041W YBT1P32386 1661 aa7.82□□□□□ -1.16
PRE7YBL041W CSN12P47130 423 aa7.81□□□□□ -1.16
PRE7YBL041W TY3B-GQ99315 1547 aa7.81□□□□□ -1.16
PRE7YBL041W ARG8P18544 423 aa7.79□□□□□ -1.16
PRE7YBL041W OPT2Q06593 877 aa7.77□□□□□ -1.17
PRE7YBL041W RAD59Q12223 238 aa7.77□□□□□ -1.17
PRE7YBL041W APP1P53933 587 aa7.76□□□□□ -1.17
PRE7YBL041W YSP2Q06681 1438 aa7.76□□□□□ -1.17
PRE7YBL041W YBL086CP38177 466 aa7.75□□□□□ -1.17
PRE7YBL041W FIG4P42837 879 aa7.75□□□□□ -1.17
PRE7YBL041W SRF1Q12516 437 aa7.75□□□□□ -1.17
PRE7YBL041W DNF3Q12674 1656 aa7.75□□□□□ -1.17
PRE7YBL041W CAF120P53836 1060 aa7.72□□□□□ -1.17
PRE7YBL041W BNR1P40450 1375 aa7.71□□□□□ -1.17
PRE7YBL041W KIN1P13185 1064 aa7.71□□□□□ -1.18
PRE7YBL041W EMW1P42842 904 aaKnown RBP7.71□□□□□ -1.18
PRE7YBL041W NUP85P46673 744 aa7.71□□□□□ -1.18
PRE7YBL041W LEU3P08638 886 aa7.7□□□□□ -1.18
PRE7YBL041W AAD14P42884 376 aa7.7□□□□□ -1.18
PRE7YBL041W YAP3P38749 330 aa7.69□□□□□ -1.18
PRE7YBL041W ACO2P39533 789 aa7.69□□□□□ -1.18
PRE7YBL041W YPR084WQ06821 456 aa7.69□□□□□ -1.18
PRE7YBL041W GLY1P37303 387 aaKnown RBP7.68□□□□□ -1.18
PRE7YBL041W TEC1P18412 486 aa7.66□□□□□ -1.18
PRE7YBL041W SRB8P25648 1427 aa7.65□□□□□ -1.18
PRE7YBL041W DLD1P32891 587 aa7.65□□□□□ -1.18
PRE7YBL041W YLR346CQ06139 101 aa7.65□□□□□ -1.18
PRE7YBL041W TY1A-BLQ12266 440 aa7.65□□□□□ -1.18
PRE7YBL041W ARG82P07250 355 aa7.64□□□□□ -1.19
PRE7YBL041W MIP1P15801 1254 aa7.64□□□□□ -1.19
PRE7YBL041W YIR007WP40566 764 aa7.64□□□□□ -1.19
PRE7YBL041W SSA2P10592 639 aaKnown RBP7.63□□□□□ -1.19
PRE7YBL041W MAK16P10962 306 aaPredicted RBP7.63□□□□□ -1.19
PRE7YBL041W YJR098CP47139 656 aa7.63□□□□□ -1.19
PRE7YBL041W SCW11P53189 542 aa7.63□□□□□ -1.19
PRE7YBL041W DFG5Q05031 458 aa7.63□□□□□ -1.19
PRE7YBL041W MKS1P34072 584 aa7.62□□□□□ -1.19
PRE7YBL041W URN1Q06525 465 aaKnown RBP7.62□□□□□ -1.19
PRE7YBL041W GUA1P38625 525 aaKnown RBP7.61□□□□□ -1.19
PRE7YBL041W LSC2P53312 427 aa7.61□□□□□ -1.19
PRE7YBL041W MAK10Q02197 733 aa7.59□□□□□ -1.19
PRE7YBL041W HAP1P0CE41 1502 aa7.58□□□□□ -1.2
PRE7YBL041W TCB1Q12466 1186 aa7.58□□□□□ -1.2
PRE7YBL041W FBP26P32604 452 aa7.57□□□□□ -1.2
PRE7YBL041W NUP188P52593 1655 aaKnown RBP7.56□□□□□ -1.2
PRE7YBL041W USO1P25386 1790 aa7.55□□□□□ -1.2
PRE7YBL041W GUT2P32191 649 aa7.54□□□□□ -1.2
PRE7YBL041W RPN1P38764 993 aaKnown RBP7.54□□□□□ -1.2
PRE7YBL041W NAF1P53919 492 aaKnown RBP7.54□□□□□ -1.2
PRE7YBL041W UBP2Q01476 1272 aa7.54□□□□□ -1.2
PRE7YBL041W BUD21Q08492 214 aaPredicted RBP7.54□□□□□ -1.2
PRE7YBL041W STE6P12866 1290 aa7.53□□□□□ -1.2
PRE7YBL041W YGR035CP53222 116 aa7.53□□□□□ -1.2
PRE7YBL041W HPF1Q05164 967 aa7.53□□□□□ -1.2
PRE7YBL041W FRA1Q07825 749 aa7.53□□□□□ -1.2
PRE7YBL041W IML1P47170 1584 aa7.53□□□□□ -1.2
PRE7YBL041W IPL1P38991 367 aa7.52□□□□□ -1.21
PRE7YBL041W ROG3P43602 733 aa7.52□□□□□ -1.21
PRE7YBL041W BDS1Q08347 646 aa7.52□□□□□ -1.21
PRE7YBL041W VMR1P38735 1592 aa7.5□□□□□ -1.21
PRE7YBL041W CCP1P00431 361 aa7.5□□□□□ -1.21
PRE7YBL041W OSH7P38755 437 aa7.5□□□□□ -1.21
PRE7YBL041W ATG20Q07528 640 aa7.5□□□□□ -1.21
PRE7YBL041W TY1B-NL2Q99337 1749 aaKnown RBP7.49□□□□□ -1.21
PRE7YBL041W TY1A-MR1Q04215 440 aa7.49□□□□□ -1.21
PRE7YBL041W ISF1P32488 338 aa7.48□□□□□ -1.21
PRE7YBL041W HPC2Q01448 625 aa7.48□□□□□ -1.21
PRE7YBL041W ISU1Q03020 165 aa7.48□□□□□ -1.21
PRE7YBL041W STE20Q03497 939 aaKnown RBP7.48□□□□□ -1.21
PRE7YBL041W MCM16Q12262 181 aa7.48□□□□□ -1.21
PRE7YBL041W IKI3Q06706 1349 aaKnown RBP7.47□□□□□ -1.21
PRE7YBL041W CDC19P00549 500 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms