RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	PKH3	Q03306	898 aa	Predicted RBP	5.08	□□□□□ -1.6
YAL004W	YAL004W	ATF2	P53296	535 aa		5.07	□□□□□ -1.6
YAL004W	YAL004W	TDA6	Q06466	467 aa		5.07	□□□□□ -1.6
YAL004W	YAL004W	TOP1	P04786	769 aa		5.06	□□□□□ -1.6
YAL004W	YAL004W	TEC1	P18412	486 aa		5.06	□□□□□ -1.6
YAL004W	YAL004W	RPO31	P04051	1460 aa		5.06	□□□□□ -1.6
YAL004W	YAL004W	PEP1	P32319	1579 aa		5.05	□□□□□ -1.6
YAL004W	YAL004W	ARG8	P18544	423 aa		5.05	□□□□□ -1.6
YAL004W	YAL004W	DIT1	P21623	536 aa		5.05	□□□□□ -1.6
YAL004W	YAL004W	SLA1	P32790	1244 aa		5.05	□□□□□ -1.6
YAL004W	YAL004W	ADE12	P80210	433 aa	Known RBP	5.05	□□□□□ -1.6
YAL004W	YAL004W	ISU1	Q03020	165 aa		5.05	□□□□□ -1.6
YAL004W	YAL004W	YDR461C-A	Q2V2P7	80 aa		5.05	□□□□□ -1.6
YAL004W	YAL004W	GLC3	P32775	704 aa		5.04	□□□□□ -1.6
YAL004W	YAL004W	UBP15	P50101	1230 aa		5.04	□□□□□ -1.6
YAL004W	YAL004W	AIM7	Q12156	149 aa		5.04	□□□□□ -1.6
YAL004W	YAL004W	TY1A-DR3	Q12441	440 aa		5.04	□□□□□ -1.6
YAL004W	YAL004W	MMS22	Q06164	1454 aa		5.04	□□□□□ -1.6
YAL004W	YAL004W	ATG2	P53855	1592 aa		5.04	□□□□□ -1.6
YAL004W	YAL004W	MDS3	P53094	1487 aa		5.03	□□□□□ -1.6
YAL004W	YAL004W	SNU71	P53207	620 aa	Known RBP	5.03	□□□□□ -1.6
YAL004W	YAL004W	MYO2	P19524	1574 aa	Known RBP	5.03	□□□□□ -1.6
YAL004W	YAL004W	SCC2	Q04002	1493 aa		5.02	□□□□□ -1.61
YAL004W	YAL004W	YCK2	P23292	546 aa	Known RBP	5.02	□□□□□ -1.61
YAL004W	YAL004W	MCX1	P38323	520 aa	Predicted RBP	5.02	□□□□□ -1.61
YAL004W	YAL004W	YMR187C	Q03236	431 aa		5.02	□□□□□ -1.61
YAL004W	YAL004W	YMR265C	Q03508	461 aa	Known RBP	5.02	□□□□□ -1.61
YAL004W	YAL004W	TOP2	P06786	1428 aa	Known RBP	5.02	□□□□□ -1.61
YAL004W	YAL004W	STU1	P38198	1513 aa		5.02	□□□□□ -1.61
YAL004W	YAL004W	SMC4	Q12267	1418 aa		5.01	□□□□□ -1.61
YAL004W	YAL004W	SBP1	P10080	294 aa	Known RBP	5.01	□□□□□ -1.61
YAL004W	YAL004W	GUA1	P38625	525 aa	Known RBP	5.01	□□□□□ -1.61
YAL004W	YAL004W	SSN3	P39073	555 aa		5.01	□□□□□ -1.61
YAL004W	YAL004W	YRB30	P53107	440 aa	Predicted RBP	5.01	□□□□□ -1.61
YAL004W	YAL004W	SUB2	Q07478	446 aa	Known RBP	5.01	□□□□□ -1.61
YAL004W	YAL004W	ESP1	Q03018	1630 aa		5.01	□□□□□ -1.61
YAL004W	YAL004W	YOR1	P53049	1477 aa		5	□□□□□ -1.61
YAL004W	YAL004W	SLD2	P34252	453 aa		5	□□□□□ -1.61
YAL004W	YAL004W	BRL1	P38770	471 aa		5	□□□□□ -1.61
YAL004W	YAL004W	MSN5	P52918	1224 aa		5	□□□□□ -1.61
YAL004W	YAL004W	KRE33	P53914	1056 aa	Known RBP	5	□□□□□ -1.61
YAL004W	YAL004W	ATG20	Q07528	640 aa		5	□□□□□ -1.61
YAL004W	YAL004W	RAD59	Q12223	238 aa		5	□□□□□ -1.61
YAL004W	YAL004W	MET10	P39692	1035 aa		4.98	□□□□□ -1.61
YAL004W	YAL004W	MRX12	P47084	519 aa		4.98	□□□□□ -1.61
YAL004W	YAL004W	YDR215C	Q12240	137 aa		4.98	□□□□□ -1.61
YAL004W	YAL004W	MYO4	P32492	1471 aa		4.98	□□□□□ -1.61
YAL004W	YAL004W	UFD4	P33202	1483 aa		4.98	□□□□□ -1.61
YAL004W	YAL004W	GPM1	P00950	247 aa	Known RBP	4.97	□□□□□ -1.61
YAL004W	YAL004W	GUT2	P32191	649 aa		4.97	□□□□□ -1.61
YAL004W	YAL004W	HPC2	Q01448	625 aa		4.97	□□□□□ -1.61
YAL004W	YAL004W	FRA1	Q07825	749 aa		4.97	□□□□□ -1.61
YAL004W	YAL004W	AMN1	P38285	549 aa	Predicted RBP	4.96	□□□□□ -1.62
YAL004W	YAL004W	DLD3	P39976	496 aa	Known RBP	4.96	□□□□□ -1.62
YAL004W	YAL004W	CSN12	P47130	423 aa		4.96	□□□□□ -1.62
YAL004W	YAL004W	MAK16	P10962	306 aa	Predicted RBP	4.95	□□□□□ -1.62
YAL004W	YAL004W	TFB3	Q03290	321 aa		4.95	□□□□□ -1.62
YAL004W	YAL004W	YCF1	P39109	1515 aa	Known RBP	4.95	□□□□□ -1.62
YAL004W	YAL004W	SSA4	P22202	642 aa	Known RBP	4.94	□□□□□ -1.62
YAL004W	YAL004W	SLN1	P39928	1220 aa	Predicted RBP	4.94	□□□□□ -1.62
YAL004W	YAL004W	WTM2	Q12206	467 aa		4.94	□□□□□ -1.62
YAL004W	YAL004W	RPP2B	P02400	110 aa	Known RBP	4.93	□□□□□ -1.62
YAL004W	YAL004W	SPT2	P06843	333 aa	Predicted RBP	4.93	□□□□□ -1.62
YAL004W	YAL004W	BRN1	P38170	754 aa		4.93	□□□□□ -1.62
YAL004W	YAL004W	APL6	P46682	809 aa		4.93	□□□□□ -1.62
YAL004W	YAL004W	YNR014W	P53719	212 aa		4.93	□□□□□ -1.62
YAL004W	YAL004W	PAM1	P37304	830 aa	Known RBP	4.92	□□□□□ -1.62
YAL004W	YAL004W	NAF1	P53919	492 aa	Known RBP	4.92	□□□□□ -1.62
YAL004W	YAL004W	RRN6	P32786	894 aa		4.91	□□□□□ -1.62
YAL004W	YAL004W	MCA1	Q08601	432 aa		4.91	□□□□□ -1.62
YAL004W	YAL004W	RKR1	Q04781	1562 aa		4.91	□□□□□ -1.62
YAL004W	YAL004W	BOI2	P39969	1040 aa		4.9	□□□□□ -1.63
YAL004W	YAL004W	RPL34A	P87262	121 aa	Predicted RBP	4.9	□□□□□ -1.63
YAL004W	YAL004W	STE20	Q03497	939 aa	Known RBP	4.9	□□□□□ -1.63
YAL004W	YAL004W	IKI3	Q06706	1349 aa	Known RBP	4.9	□□□□□ -1.63
YAL004W	YAL004W	BPT1	P14772	1559 aa		4.9	□□□□□ -1.63
YAL004W	YAL004W	STH1	P32597	1359 aa		4.9	□□□□□ -1.63
YAL004W	YAL004W	SPP41	P38904	1435 aa		4.89	□□□□□ -1.63
YAL004W	YAL004W	SHM1	P37292	490 aa	Predicted RBP	4.88	□□□□□ -1.63
YAL004W	YAL004W	AHP1	P38013	176 aa	Known RBP	4.88	□□□□□ -1.63
YAL004W	YAL004W	LSB6	P42951	607 aa		4.88	□□□□□ -1.63
YAL004W	YAL004W	PKC1	P24583	1151 aa		4.87	□□□□□ -1.63
YAL004W	YAL004W	HEM3	P28789	327 aa		4.87	□□□□□ -1.63
YAL004W	YAL004W	KNS1	P32350	737 aa	Predicted RBP	4.87	□□□□□ -1.63
YAL004W	YAL004W	NUG1	P40010	520 aa	Known RBP	4.87	□□□□□ -1.63
YAL004W	YAL004W	BIM1	P40013	344 aa		4.87	□□□□□ -1.63
YAL004W	YAL004W	JJJ2	P46997	583 aa		4.87	□□□□□ -1.63
YAL004W	YAL004W	ISR1	Q06098	443 aa	Known RBP	4.87	□□□□□ -1.63
YAL004W	YAL004W	TSC11	P40061	1430 aa		4.87	□□□□□ -1.63
YAL004W	YAL004W	SNT2	P53127	1403 aa		4.87	□□□□□ -1.63
YAL004W	YAL004W	SNQ2	P32568	1501 aa	Known RBP	4.87	□□□□□ -1.63
YAL004W	YAL004W	SSA2	P10592	639 aa	Known RBP	4.86	□□□□□ -1.63
YAL004W	YAL004W	PDC5	P16467	563 aa	Known RBP	4.86	□□□□□ -1.63
YAL004W	YAL004W	FPS1	P23900	669 aa		4.86	□□□□□ -1.63
YAL004W	YAL004W	CDC3	P32457	520 aa	Known RBP	4.86	□□□□□ -1.63
YAL004W	YAL004W	UTR2	P32623	467 aa		4.86	□□□□□ -1.63
YAL004W	YAL004W	SPC42	P36094	363 aa		4.86	□□□□□ -1.63
YAL004W	YAL004W	HAL5	P38970	855 aa	Known RBP	4.86	□□□□□ -1.63
YAL004W	YAL004W	RPL34B	P40525	121 aa	Known RBP	4.86	□□□□□ -1.63
YAL004W	YAL004W	YJL007C	P47080	104 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 50.6 ms