RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-238ENST00000638514 PNNQ9H307 717 aaKnown RBP17.49■□□□□ 0.39
KCNMA1-238ENST00000638514 SHANK2Q9UPX8 1470 aa17.49■□□□□ 0.39
KCNMA1-238ENST00000638514 IGHDP01880 384 aa17.49■□□□□ 0.39
KCNMA1-238ENST00000638514 GOLGA6L3A6NEY3 463 aa17.48■□□□□ 0.39
KCNMA1-238ENST00000638514 PPP2R1AP30153 589 aa17.48■□□□□ 0.39
KCNMA1-238ENST00000638514 EIF4G3O43432 1585 aaKnown RBP17.48■□□□□ 0.39
KCNMA1-238ENST00000638514 GGT6Q6P531 493 aa17.48■□□□□ 0.39
KCNMA1-238ENST00000638514 ARXQ96QS3 562 aa17.48■□□□□ 0.39
KCNMA1-238ENST00000638514 ANTXR1Q9H6X2 564 aa17.48■□□□□ 0.39
KCNMA1-238ENST00000638514 PRDM15P57071 1507 aaPredicted RBP17.47■□□□□ 0.39
KCNMA1-238ENST00000638514 CCDC144AA2RUR9 1427 aa17.47■□□□□ 0.39
KCNMA1-238ENST00000638514 XRCC6P12956 609 aaKnown RBP eCLIP17.47■□□□□ 0.39
KCNMA1-238ENST00000638514 CLASP1Q7Z460 1538 aa17.47■□□□□ 0.39
KCNMA1-238ENST00000638514 ADCY10Q96PN6 1610 aa17.46■□□□□ 0.39
KCNMA1-238ENST00000638514 LAMC1P11047 1609 aa17.46■□□□□ 0.39
KCNMA1-238ENST00000638514 BCAR3O75815 825 aa17.46■□□□□ 0.39
KCNMA1-238ENST00000638514 CLCN1P35523 988 aa17.46■□□□□ 0.39
KCNMA1-238ENST00000638514 CARMIL2Q6F5E8 1435 aa17.46■□□□□ 0.39
KCNMA1-238ENST00000638514 TRMT2AQ8IZ69 625 aaKnown RBP17.46■□□□□ 0.39
KCNMA1-238ENST00000638514 KNSTRNQ9Y448 316 aa17.46■□□□□ 0.39
KCNMA1-238ENST00000638514 NKTRP30414 1462 aaKnown RBP17.45■□□□□ 0.38
KCNMA1-238ENST00000638514 UPF2Q9HAU5 1272 aaKnown RBP17.45■□□□□ 0.38
KCNMA1-238ENST00000638514 CGNL1Q0VF96 1302 aa17.45■□□□□ 0.38
KCNMA1-238ENST00000638514 NLRP1Q9C000 1473 aa17.44■□□□□ 0.38
KCNMA1-238ENST00000638514 FSD2A1L4K1 749 aa17.43■□□□□ 0.38
KCNMA1-238ENST00000638514 CDC42BPAQ5VT25 1732 aa17.43■□□□□ 0.38
KCNMA1-238ENST00000638514 STAG3Q9UJ98 1225 aa17.42■□□□□ 0.38
KCNMA1-238ENST00000638514 CLUAP1Q96AJ1 413 aa17.42■□□□□ 0.38
KCNMA1-238ENST00000638514 A2MP01023 1474 aa17.41■□□□□ 0.38
KCNMA1-238ENST00000638514 KIF3BO15066 747 aa17.41■□□□□ 0.38
KCNMA1-238ENST00000638514 SPINK5Q9NQ38 1064 aaPredicted RBP17.41■□□□□ 0.38
KCNMA1-238ENST00000638514 FAM135AQ9P2D6 1515 aa17.41■□□□□ 0.38
KCNMA1-238ENST00000638514 PDE3AQ14432 1141 aa17.41■□□□□ 0.38
KCNMA1-238ENST00000638514 CCDC146Q8IYE0 955 aa17.41■□□□□ 0.38
KCNMA1-238ENST00000638514 TBC1D2Q9BYX2 928 aa17.41■□□□□ 0.38
KCNMA1-238ENST00000638514 E9PSI1 815 aa17.4■□□□□ 0.38
KCNMA1-238ENST00000638514 PANK2Q9BZ23 570 aa17.4■□□□□ 0.38
KCNMA1-238ENST00000638514 MCM4P33991 863 aa17.39■□□□□ 0.38
KCNMA1-238ENST00000638514 TBC1D32Q96NH3 1257 aa17.39■□□□□ 0.38
KCNMA1-238ENST00000638514 GZF1Q9H116 711 aaPredicted RBP17.39■□□□□ 0.37
KCNMA1-238ENST00000638514 MAGI2Q86UL8 1455 aa17.39■□□□□ 0.37
KCNMA1-238ENST00000638514 PLB1Q6P1J6 1458 aa17.39■□□□□ 0.37
KCNMA1-238ENST00000638514 AFAP1Q8N556 730 aa17.39■□□□□ 0.37
KCNMA1-238ENST00000638514 NINLQ9Y2I6 1382 aa17.39■□□□□ 0.37
KCNMA1-238ENST00000638514 EIF2AK4Q9P2K8 1649 aaKnown RBP17.38■□□□□ 0.37
KCNMA1-238ENST00000638514 APAF1O14727 1248 aa17.38■□□□□ 0.37
KCNMA1-238ENST00000638514 AMER1Q5JTC6 1135 aaPredicted RBP17.38■□□□□ 0.37
KCNMA1-238ENST00000638514 MLECQ14165 292 aa17.37■□□□□ 0.37
KCNMA1-238ENST00000638514 COG6Q9Y2V7 657 aa17.37■□□□□ 0.37
KCNMA1-238ENST00000638514 PIK3C2GO75747 1445 aa17.37■□□□□ 0.37
KCNMA1-238ENST00000638514 WDR7Q9Y4E6 1490 aa17.37■□□□□ 0.37
KCNMA1-238ENST00000638514 ABCC10Q5T3U5 1492 aa17.37■□□□□ 0.37
KCNMA1-238ENST00000638514 MRE11P49959 708 aa17.36■□□□□ 0.37
KCNMA1-238ENST00000638514 PANK1Q8TE04 598 aa17.36■□□□□ 0.37
KCNMA1-238ENST00000638514 CENPJQ9HC77 1338 aaPredicted RBP17.35■□□□□ 0.37
KCNMA1-238ENST00000638514 SLC24A1O60721 1099 aa17.35■□□□□ 0.37
KCNMA1-238ENST00000638514 STK26Q9P289 416 aa17.35■□□□□ 0.37
KCNMA1-238ENST00000638514 NUP160Q12769 1436 aa17.35■□□□□ 0.37
KCNMA1-238ENST00000638514 ABCC2Q92887 1545 aa17.35■□□□□ 0.37
KCNMA1-238ENST00000638514 A0A0U1RQG5 324 aaPredicted RBP17.35■□□□□ 0.37
KCNMA1-238ENST00000638514 SPRYD3Q8NCJ5 442 aa17.35■□□□□ 0.37
KCNMA1-238ENST00000638514 PMFBP1Q8TBY8 1022 aa17.35■□□□□ 0.37
KCNMA1-238ENST00000638514 TRAK2O60296 914 aa17.34■□□□□ 0.37
KCNMA1-238ENST00000638514 ZMYM3Q14202 1370 aa17.34■□□□□ 0.37
KCNMA1-238ENST00000638514 CCDC141Q6ZP82 1450 aa17.34■□□□□ 0.37
KCNMA1-238ENST00000638514 CHMP5Q9NZZ3 219 aa17.33■□□□□ 0.36
KCNMA1-238ENST00000638514 PLA2R1Q13018 1463 aa17.33■□□□□ 0.36
KCNMA1-238ENST00000638514 ASXL1Q8IXJ9 1541 aa17.32■□□□□ 0.36
KCNMA1-238ENST00000638514 NGEFQ8N5V2 710 aa17.31■□□□□ 0.36
KCNMA1-238ENST00000638514 MYO5CQ9NQX4 1742 aa17.31■□□□□ 0.36
KCNMA1-238ENST00000638514 EFCAB2Q5VUJ9 269 aa17.31■□□□□ 0.36
KCNMA1-238ENST00000638514 MYH16Q9H6N6 1097 aa17.31■□□□□ 0.36
KCNMA1-238ENST00000638514 CDCA8Q53HL2 280 aa17.31■□□□□ 0.36
KCNMA1-238ENST00000638514 PDZRN3Q9UPQ7 1066 aa17.3■□□□□ 0.36
KCNMA1-238ENST00000638514 DMRT2Q9Y5R5 561 aa17.3■□□□□ 0.36
KCNMA1-238ENST00000638514 ARHGEF5Q12774 1597 aa17.3■□□□□ 0.36
KCNMA1-238ENST00000638514 SYNJ2O15056 1496 aa17.3■□□□□ 0.36
KCNMA1-238ENST00000638514 RBM10P98175 930 aaKnown RBP17.3■□□□□ 0.36
KCNMA1-238ENST00000638514 AAMPQ13685 434 aa17.3■□□□□ 0.36
KCNMA1-238ENST00000638514 ESPNB1AK53 854 aa17.29■□□□□ 0.36
KCNMA1-238ENST00000638514 GRPEL1Q9HAV7 217 aa17.29■□□□□ 0.36
KCNMA1-238ENST00000638514 SYNMO15061 1565 aa17.28■□□□□ 0.36
KCNMA1-238ENST00000638514 ISY1Q9ULR0 285 aaKnown RBP17.28■□□□□ 0.36
KCNMA1-238ENST00000638514 PLXNC1O60486 1568 aa17.28■□□□□ 0.36
KCNMA1-238ENST00000638514 TRAK1Q9UPV9 953 aa17.28■□□□□ 0.36
KCNMA1-238ENST00000638514 MAGI1Q96QZ7 1491 aaPredicted RBP17.27■□□□□ 0.36
KCNMA1-238ENST00000638514 NPC1L1Q9UHC9 1359 aa17.27■□□□□ 0.36
KCNMA1-238ENST00000638514 SPAG9O60271 1321 aaKnown RBP17.27■□□□□ 0.36
KCNMA1-238ENST00000638514 DDX11L8A8MPP1 907 aa17.27■□□□□ 0.36
KCNMA1-238ENST00000638514 RNF17Q9BXT8 1623 aaKnown RBP17.27■□□□□ 0.36
KCNMA1-238ENST00000638514 MRC2Q9UBG0 1479 aa17.27■□□□□ 0.36
KCNMA1-238ENST00000638514 PCDHB15Q9Y5E8 787 aa17.26■□□□□ 0.35
KCNMA1-238ENST00000638514 GRIN2AQ12879 1464 aa17.26■□□□□ 0.35
KCNMA1-238ENST00000638514 RWDD1Q9H446 243 aaPredicted RBP17.25■□□□□ 0.35
KCNMA1-238ENST00000638514 TRIM44Q96DX7 344 aaPredicted RBP17.25■□□□□ 0.35
KCNMA1-238ENST00000638514 C22orf23Q9BZE7 217 aa17.25■□□□□ 0.35
KCNMA1-238ENST00000638514 RRP7AQ9Y3A4 280 aaKnown RBP17.25■□□□□ 0.35
KCNMA1-238ENST00000638514 WWC1Q8IX03 1113 aa17.23■□□□□ 0.35
KCNMA1-238ENST00000638514 ERBB4Q15303 1308 aa17.23■□□□□ 0.35
KCNMA1-238ENST00000638514 SOX12O15370 315 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms