RNA–Protein interactions for RNA: ENST00000636987.1

ARHGEF4-218, Transcript of Rho guanine nucleotide exchange factor 4, humanhuman

TSL 2

Gene ARHGEF4, Length 3,656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4-218ENST00000636987 COL17A1Q9UMD9 1497 aaPredicted RBP13.14□□□□□ -0.31
ARHGEF4-218ENST00000636987 WASHC2CQ9Y4E1 1318 aa13.14□□□□□ -0.31
ARHGEF4-218ENST00000636987 GLI2P10070 1586 aa13.14□□□□□ -0.31
ARHGEF4-218ENST00000636987 POGZQ7Z3K3 1410 aa13.14□□□□□ -0.31
ARHGEF4-218ENST00000636987 DNMT1P26358 1616 aaKnown RBP13.14□□□□□ -0.31
ARHGEF4-218ENST00000636987 KIF13AQ9H1H9 1805 aa13.13□□□□□ -0.31
ARHGEF4-218ENST00000636987 CDCA7LQ96GN5 454 aa13.13□□□□□ -0.31
ARHGEF4-218ENST00000636987 HFM1A2PYH4 1435 aa13.13□□□□□ -0.31
ARHGEF4-218ENST00000636987 YEATS2Q9ULM3 1422 aa13.13□□□□□ -0.31
ARHGEF4-218ENST00000636987 MAP3K4Q9Y6R4 1608 aa13.13□□□□□ -0.31
ARHGEF4-218ENST00000636987 NBPF8Q3BBV2 869 aa13.12□□□□□ -0.31
ARHGEF4-218ENST00000636987 FAM43AQ8N2R8 423 aa13.12□□□□□ -0.31
ARHGEF4-218ENST00000636987 CARD11Q9BXL7 1154 aa13.12□□□□□ -0.31
ARHGEF4-218ENST00000636987 ARAP3Q8WWN8 1544 aa13.11□□□□□ -0.31
ARHGEF4-218ENST00000636987 CC2D1BQ5T0F9 858 aaKnown RBP13.11□□□□□ -0.31
ARHGEF4-218ENST00000636987 BECN1Q14457 450 aa13.11□□□□□ -0.31
ARHGEF4-218ENST00000636987 PLCD3Q8N3E9 789 aa13.11□□□□□ -0.31
ARHGEF4-218ENST00000636987 SAMD1Q6SPF0 538 aaPredicted RBP13.1□□□□□ -0.31
ARHGEF4-218ENST00000636987 ROCK1Q13464 1354 aa13.1□□□□□ -0.31
ARHGEF4-218ENST00000636987 PKD2Q13563 968 aa13.09□□□□□ -0.31
ARHGEF4-218ENST00000636987 UPF2Q9HAU5 1272 aaKnown RBP13.09□□□□□ -0.31
ARHGEF4-218ENST00000636987 L1TD1Q5T7N2 865 aaKnown RBP13.09□□□□□ -0.31
ARHGEF4-218ENST00000636987 PNISRQ8TF01 805 aaKnown RBP13.08□□□□□ -0.32
ARHGEF4-218ENST00000636987 POGKQ9P215 609 aa13.08□□□□□ -0.32
ARHGEF4-218ENST00000636987 ATP7AQ04656 1500 aa13.08□□□□□ -0.32
ARHGEF4-218ENST00000636987 FAM161AQ3B820 660 aa13.08□□□□□ -0.32
ARHGEF4-218ENST00000636987 TRIM44Q96DX7 344 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF4-218ENST00000636987 ARHGEF5Q12774 1597 aa13.07□□□□□ -0.32
ARHGEF4-218ENST00000636987 CFAP74Q9C0B2 1584 aa13.07□□□□□ -0.32
ARHGEF4-218ENST00000636987 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF4-218ENST00000636987 DCAF11Q8TEB1 546 aa13.06□□□□□ -0.32
ARHGEF4-218ENST00000636987 ARID3AQ99856 593 aa13.06□□□□□ -0.32
ARHGEF4-218ENST00000636987 SHANK2Q9UPX8 1470 aa13.05□□□□□ -0.32
ARHGEF4-218ENST00000636987 CHGAP10645 457 aaKnown RBP13.05□□□□□ -0.32
ARHGEF4-218ENST00000636987 SENP3Q9H4L4 574 aaPredicted RBP13.05□□□□□ -0.32
ARHGEF4-218ENST00000636987 DHX29Q7Z478 1369 aaKnown RBP13.05□□□□□ -0.32
ARHGEF4-218ENST00000636987 A2MP01023 1474 aa13.05□□□□□ -0.32
ARHGEF4-218ENST00000636987 KDM6BO15054 1643 aa13.04□□□□□ -0.32
ARHGEF4-218ENST00000636987 KANK1Q14678 1352 aa13.04□□□□□ -0.32
ARHGEF4-218ENST00000636987 ZFYVE16Q7Z3T8 1539 aa13.04□□□□□ -0.32
ARHGEF4-218ENST00000636987 GOLGA6L3A6NEY3 463 aa13.03□□□□□ -0.32
ARHGEF4-218ENST00000636987 RTEL1-TNFRSF6BF6WH68 1400 aa13.03□□□□□ -0.32
ARHGEF4-218ENST00000636987 WDR43Q15061 677 aaKnown RBP eCLIP13.03□□□□□ -0.32
ARHGEF4-218ENST00000636987 AMER1Q5JTC6 1135 aaPredicted RBP13.03□□□□□ -0.32
ARHGEF4-218ENST00000636987 PPRC1Q5VV67 1664 aaKnown RBP13.03□□□□□ -0.32
ARHGEF4-218ENST00000636987 ADGRL2O95490 1459 aa13.02□□□□□ -0.32
ARHGEF4-218ENST00000636987 MLH3Q9UHC1 1453 aa13.02□□□□□ -0.33
ARHGEF4-218ENST00000636987 GTF2E1P29083 439 aaPredicted RBP13.02□□□□□ -0.33
ARHGEF4-218ENST00000636987 RGL3Q3MIN7 710 aa13.01□□□□□ -0.33
ARHGEF4-218ENST00000636987 HECW2Q9P2P5 1572 aa13.01□□□□□ -0.33
ARHGEF4-218ENST00000636987 USP47Q96K76 1375 aa13□□□□□ -0.33
ARHGEF4-218ENST00000636987 C20orf194Q5TEA3 1177 aa13□□□□□ -0.33
ARHGEF4-218ENST00000636987 DUOX2Q9NRD8 1548 aa13□□□□□ -0.33
ARHGEF4-218ENST00000636987 MYBBP1AQ9BQG0 1328 aaKnown RBP13□□□□□ -0.33
ARHGEF4-218ENST00000636987 ZFP91Q96JP5 570 aaPredicted RBP13□□□□□ -0.33
ARHGEF4-218ENST00000636987 ST20-MTHFSA0A0A6YYL1 179 aa12.99□□□□□ -0.33
ARHGEF4-218ENST00000636987 CENPQQ7L2Z9 268 aaPredicted RBP12.99□□□□□ -0.33
ARHGEF4-218ENST00000636987 RRAGDQ9NQL2 400 aaPredicted RBP12.99□□□□□ -0.33
ARHGEF4-218ENST00000636987 ATP10AO60312 1499 aa12.99□□□□□ -0.33
ARHGEF4-218ENST00000636987 PDE3BQ13370 1112 aa12.99□□□□□ -0.33
ARHGEF4-218ENST00000636987 NLRP13Q86W25 1043 aa12.99□□□□□ -0.33
ARHGEF4-218ENST00000636987 CEBPAP49715 358 aaPredicted RBP12.98□□□□□ -0.33
ARHGEF4-218ENST00000636987 CROCC2H7BZ55 1655 aa12.98□□□□□ -0.33
ARHGEF4-218ENST00000636987 RALBP1Q15311 655 aa12.98□□□□□ -0.33
ARHGEF4-218ENST00000636987 KIDINS220Q9ULH0 1771 aa12.98□□□□□ -0.33
ARHGEF4-218ENST00000636987 ADGBQ8N7X0 1667 aa12.97□□□□□ -0.33
ARHGEF4-218ENST00000636987 STAG3Q9UJ98 1225 aa12.97□□□□□ -0.33
ARHGEF4-218ENST00000636987 RNF123Q5XPI4 1314 aa12.97□□□□□ -0.33
ARHGEF4-218ENST00000636987 ERBINQ96RT1 1412 aa12.97□□□□□ -0.33
ARHGEF4-218ENST00000636987 KDM5CP41229 1560 aa12.96□□□□□ -0.33
ARHGEF4-218ENST00000636987 ANP32BQ92688 251 aaKnown RBP12.96□□□□□ -0.33
ARHGEF4-218ENST00000636987 KTN1Q86UP2 1357 aaKnown RBP12.96□□□□□ -0.34
ARHGEF4-218ENST00000636987 VGLL3A8MV65 326 aa12.96□□□□□ -0.34
ARHGEF4-218ENST00000636987 MYH16Q9H6N6 1097 aa12.96□□□□□ -0.34
ARHGEF4-218ENST00000636987 RICTORQ6R327 1708 aa12.96□□□□□ -0.34
ARHGEF4-218ENST00000636987 FBXO31Q5XUX0 539 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF4-218ENST00000636987 INO80Q9ULG1 1556 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF4-218ENST00000636987 ABCA6Q8N139 1617 aa12.95□□□□□ -0.34
ARHGEF4-218ENST00000636987 BRD2P25440 801 aaKnown RBP12.95□□□□□ -0.34
ARHGEF4-218ENST00000636987 FRMPD1Q5SYB0 1578 aa12.95□□□□□ -0.34
ARHGEF4-218ENST00000636987 MAGI2Q86UL8 1455 aa12.94□□□□□ -0.34
ARHGEF4-218ENST00000636987 MAST1Q9Y2H9 1570 aa12.94□□□□□ -0.34
ARHGEF4-218ENST00000636987 DIP2CQ9Y2E4 1556 aa12.94□□□□□ -0.34
ARHGEF4-218ENST00000636987 NEUROD2Q15784 382 aa12.92□□□□□ -0.34
ARHGEF4-218ENST00000636987 PLXNC1O60486 1568 aa12.92□□□□□ -0.34
ARHGEF4-218ENST00000636987 GCC2Q8IWJ2 1684 aa12.92□□□□□ -0.34
ARHGEF4-218ENST00000636987 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.92□□□□□ -0.345e-8■■■■■ 56.5
ARHGEF4-218ENST00000636987 PANK2Q9BZ23 570 aa12.92□□□□□ -0.34
ARHGEF4-218ENST00000636987 PRDM4Q9UKN5 801 aa12.92□□□□□ -0.34
ARHGEF4-218ENST00000636987 NUTM2DQ5VT03 806 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF4-218ENST00000636987 CFAP65Q6ZU64 1925 aaKnown RBP12.91□□□□□ -0.34
ARHGEF4-218ENST00000636987 STAC3Q96MF2 364 aa12.9□□□□□ -0.34
ARHGEF4-218ENST00000636987 ZBTB7CA1YPR0 619 aa12.9□□□□□ -0.34
ARHGEF4-218ENST00000636987 CCDC146Q8IYE0 955 aa12.9□□□□□ -0.34
ARHGEF4-218ENST00000636987 PZPP20742 1482 aa12.9□□□□□ -0.34
ARHGEF4-218ENST00000636987 FAM135AQ9P2D6 1515 aa12.9□□□□□ -0.34
ARHGEF4-218ENST00000636987 SECISBP2LQ93073 1101 aaKnown RBP12.89□□□□□ -0.35
ARHGEF4-218ENST00000636987 RRP9O43818 475 aaKnown RBP12.89□□□□□ -0.35
ARHGEF4-218ENST00000636987 MAPK8IP2Q13387 824 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF4-218ENST00000636987 ZMYM4Q5VZL5 1548 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms