RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 ASXL1Q8IXJ9 1541 aa4.42□□□□□ -1.7
U1.39-201ENST00000621562 CLTCQ00610 1675 aaKnown RBP4.42□□□□□ -1.7
U1.39-201ENST00000621562 ADGRB1O14514 1584 aa4.42□□□□□ -1.7
U1.39-201ENST00000621562 SETD1AO15047 1707 aaKnown RBP4.42□□□□□ -1.7
U1.39-201ENST00000621562 PER1O15534 1290 aaPredicted RBP4.42□□□□□ -1.7
U1.39-201ENST00000621562 NBPF1Q3BBV0 1214 aa4.42□□□□□ -1.7
U1.39-201ENST00000621562 ZNF326Q5BKZ1 582 aaKnown RBP4.42□□□□□ -1.7
U1.39-201ENST00000621562 DIP2CQ9Y2E4 1556 aa4.42□□□□□ -1.7
U1.39-201ENST00000621562 ERVK-7P63135 1459 aa4.42□□□□□ -1.7
U1.39-201ENST00000621562 ZNF518AQ6AHZ1 1483 aa4.42□□□□□ -1.7
U1.39-201ENST00000621562 SCAF11Q99590 1463 aaKnown RBP4.42□□□□□ -1.7
U1.39-201ENST00000621562 KIF20BQ96Q89 1820 aa4.42□□□□□ -1.7
U1.39-201ENST00000621562 PREX1Q8TCU6 1659 aa4.41□□□□□ -1.7
U1.39-201ENST00000621562 DCAF11Q8TEB1 546 aa4.41□□□□□ -1.7
U1.39-201ENST00000621562 ADGRL1O94910 1474 aa4.41□□□□□ -1.7
U1.39-201ENST00000621562 ABCC3O15438 1527 aa4.41□□□□□ -1.7
U1.39-201ENST00000621562 GLI2P10070 1586 aa4.4□□□□□ -1.7
U1.39-201ENST00000621562 PIK3C2GO75747 1445 aa4.4□□□□□ -1.7
U1.39-201ENST00000621562 RALBP1Q15311 655 aa4.4□□□□□ -1.71
U1.39-201ENST00000621562 NEXMIFQ5QGS0 1516 aa4.4□□□□□ -1.71
U1.39-201ENST00000621562 NPC1L1Q9UHC9 1359 aa4.4□□□□□ -1.71
U1.39-201ENST00000621562 ASXL2Q76L83 1435 aa4.39□□□□□ -1.71
U1.39-201ENST00000621562 POGZQ7Z3K3 1410 aa4.39□□□□□ -1.71
U1.39-201ENST00000621562 EFCAB2Q5VUJ9 269 aa4.39□□□□□ -1.71
U1.39-201ENST00000621562 NLRP13Q86W25 1043 aa4.39□□□□□ -1.71
U1.39-201ENST00000621562 KDM2AQ9Y2K7 1162 aa4.39□□□□□ -1.71
U1.39-201ENST00000621562 WASHC2CQ9Y4E1 1318 aa4.39□□□□□ -1.71
U1.39-201ENST00000621562 ADGRB2O60241 1585 aa4.39□□□□□ -1.71
U1.39-201ENST00000621562 SBNO2Q9Y2G9 1366 aa4.39□□□□□ -1.71
U1.39-201ENST00000621562 DLG5Q8TDM6 1919 aa4.38□□□□□ -1.71
U1.39-201ENST00000621562 IQSEC2Q5JU85 1478 aa4.38□□□□□ -1.71
U1.39-201ENST00000621562 MLH3Q9UHC1 1453 aa4.38□□□□□ -1.71
U1.39-201ENST00000621562 TULP4Q9NRJ4 1543 aa4.38□□□□□ -1.71
U1.39-201ENST00000621562 B4GALNT3Q6L9W6 998 aa4.38□□□□□ -1.71
U1.39-201ENST00000621562 SPAG9O60271 1321 aaKnown RBP4.38□□□□□ -1.71
U1.39-201ENST00000621562 TMEM131LA2VDJ0 1609 aa4.38□□□□□ -1.71
U1.39-201ENST00000621562 RIMBP3CA6NJZ7 1639 aa4.37□□□□□ -1.71
U1.39-201ENST00000621562 RIMBP3BA6NNM3 1639 aa4.37□□□□□ -1.71
U1.39-201ENST00000621562 RIMBP3Q9UFD9 1639 aa4.37□□□□□ -1.71
U1.39-201ENST00000621562 RRP1P56182 461 aaKnown RBP4.37□□□□□ -1.71
U1.39-201ENST00000621562 POLR3GLQ9BT43 218 aa4.37□□□□□ -1.71
U1.39-201ENST00000621562 ZNF521Q96K83 1311 aa4.37□□□□□ -1.71
U1.39-201ENST00000621562 PLEKHH1Q9ULM0 1364 aa4.37□□□□□ -1.71
U1.39-201ENST00000621562 MAP2P11137 1827 aaKnown RBP4.37□□□□□ -1.71
U1.39-201ENST00000621562 NOS1P29475 1434 aa4.37□□□□□ -1.71
U1.39-201ENST00000621562 NPATQ14207 1427 aa4.37□□□□□ -1.71
U1.39-201ENST00000621562 KNDC1Q76NI1 1749 aa4.36□□□□□ -1.71
U1.39-201ENST00000621562 AKAP12Q02952 1782 aa4.36□□□□□ -1.71
U1.39-201ENST00000621562 RGL3Q3MIN7 710 aa4.36□□□□□ -1.71
U1.39-201ENST00000621562 AMER1Q5JTC6 1135 aaPredicted RBP4.36□□□□□ -1.71
U1.39-201ENST00000621562 TMC1Q8TDI8 760 aa4.36□□□□□ -1.71
U1.39-201ENST00000621562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.36□□□□□ -1.71
U1.39-201ENST00000621562 KIF13AQ9H1H9 1805 aa4.36□□□□□ -1.71
U1.39-201ENST00000621562 TSPOAP1O95153 1857 aa4.36□□□□□ -1.71
U1.39-201ENST00000621562 SENP3-EIF4A1A0A087X0R7 540 aa4.35□□□□□ -1.71
U1.39-201ENST00000621562 PDE3BQ13370 1112 aa4.35□□□□□ -1.71
U1.39-201ENST00000621562 AFAP1Q8N556 730 aa4.35□□□□□ -1.71
U1.39-201ENST00000621562 PANK3Q9H999 370 aa4.35□□□□□ -1.71
U1.39-201ENST00000621562 KANK1Q14678 1352 aa4.35□□□□□ -1.71
U1.39-201ENST00000621562 NEO1Q92859 1461 aa4.35□□□□□ -1.71
U1.39-201ENST00000621562 REREQ9P2R6 1566 aa4.35□□□□□ -1.71
U1.39-201ENST00000621562 NRXN3Q9Y4C0 1643 aa4.35□□□□□ -1.71
U1.39-201ENST00000621562 MON2Q7Z3U7 1717 aa4.35□□□□□ -1.71
U1.39-201ENST00000621562 PPP2R1AP30153 589 aa4.34□□□□□ -1.71
U1.39-201ENST00000621562 TMF1P82094 1093 aa4.34□□□□□ -1.71
U1.39-201ENST00000621562 CNGB1Q14028 1251 aaPredicted RBP4.34□□□□□ -1.71
U1.39-201ENST00000621562 EXOC6Q8TAG9 804 aa4.34□□□□□ -1.71
U1.39-201ENST00000621562 CDCA7LQ96GN5 454 aa4.34□□□□□ -1.71
U1.39-201ENST00000621562 STAC3Q96MF2 364 aa4.34□□□□□ -1.71
U1.39-201ENST00000621562 EIF3AQ14152 1382 aaKnown RBP4.34□□□□□ -1.71
U1.39-201ENST00000621562 ARHGAP31Q2M1Z3 1444 aa4.34□□□□□ -1.71
U1.39-201ENST00000621562 COL3A1P02461 1466 aaPredicted RBP4.34□□□□□ -1.71
U1.39-201ENST00000621562 CDC42BPGQ6DT37 1551 aa4.34□□□□□ -1.71
U1.39-201ENST00000621562 DIP2BQ9P265 1576 aa4.34□□□□□ -1.71
U1.39-201ENST00000621562 ITSN1Q15811 1721 aa4.33□□□□□ -1.72
U1.39-201ENST00000621562 ADGRF5Q8IZF2 1346 aa4.33□□□□□ -1.72
U1.39-201ENST00000621562 CC2D1BQ5T0F9 858 aaKnown RBP4.33□□□□□ -1.72
U1.39-201ENST00000621562 RCAN3Q9UKA8 241 aa4.33□□□□□ -1.72
U1.39-201ENST00000621562 FMN2Q9NZ56 1722 aa4.32□□□□□ -1.72
U1.39-201ENST00000621562 TOPAZ1Q8N9V7 1692 aa4.32□□□□□ -1.72
U1.39-201ENST00000621562 PTPRMP28827 1452 aa4.32□□□□□ -1.72
U1.39-201ENST00000621562 NLRP1Q9C000 1473 aa4.32□□□□□ -1.72
U1.39-201ENST00000621562 ZFYVE9O95405 1425 aa4.32□□□□□ -1.72
U1.39-201ENST00000621562 KDM2BQ8NHM5 1336 aa4.32□□□□□ -1.72
U1.39-201ENST00000621562 PAK3O75914 559 aaPredicted RBP4.32□□□□□ -1.72
U1.39-201ENST00000621562 TRMT2AQ8IZ69 625 aaKnown RBP4.32□□□□□ -1.72
U1.39-201ENST00000621562 NALCNQ8IZF0 1738 aa4.32□□□□□ -1.72
U1.39-201ENST00000621562 NKTRP30414 1462 aaKnown RBP4.31□□□□□ -1.72
U1.39-201ENST00000621562 CD109Q6YHK3 1445 aa4.31□□□□□ -1.72
U1.39-201ENST00000621562 POLR3AO14802 1390 aaPredicted RBP4.31□□□□□ -1.72
U1.39-201ENST00000621562 KIF3BO15066 747 aa4.31□□□□□ -1.72
U1.39-201ENST00000621562 DUSP27Q5VZP5 1158 aa4.31□□□□□ -1.72
U1.39-201ENST00000621562 CCDC136Q96JN2 1154 aa4.31□□□□□ -1.72
U1.39-201ENST00000621562 CARD14Q9BXL6 1004 aa4.31□□□□□ -1.72
U1.39-201ENST00000621562 ADAMTS8Q9UP79 889 aa4.31□□□□□ -1.72
U1.39-201ENST00000621562 N4BP2Q86UW6 1770 aaPredicted RBP4.31□□□□□ -1.72
U1.39-201ENST00000621562 C3P01024 1663 aa4.31□□□□□ -1.72
U1.39-201ENST00000621562 RIMS1Q86UR5 1692 aaKnown RBP4.31□□□□□ -1.72
U1.39-201ENST00000621562 SPATA31D1Q6ZQQ2 1576 aa4.31□□□□□ -1.72
U1.39-201ENST00000621562 NRKQ7Z2Y5 1582 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms