RNA–Protein interactions for RNA: ENST00000620175.4

SYN2-205, Transcript of synapsin II, humanhuman

TSL 1 (best) BASIC

Gene SYN2, Length 3,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-205ENST00000620175 ERICH3Q5RHP9 1530 aa17.59■□□□□ 0.41
SYN2-205ENST00000620175 DUSP27Q5VZP5 1158 aa17.58■□□□□ 0.41
SYN2-205ENST00000620175 KIAA2012Q0VF49 1180 aa17.58■□□□□ 0.4
SYN2-205ENST00000620175 RNF123Q5XPI4 1314 aa17.58■□□□□ 0.4
SYN2-205ENST00000620175 KIF21AQ7Z4S6 1674 aa17.57■□□□□ 0.4
SYN2-205ENST00000620175 STAG3Q9UJ98 1225 aa17.57■□□□□ 0.4
SYN2-205ENST00000620175 TAOK2Q9UL54 1235 aa17.57■□□□□ 0.4
SYN2-205ENST00000620175 TNNQ9UQP3 1299 aa17.57■□□□□ 0.4
SYN2-205ENST00000620175 MAP3K1Q13233 1512 aa17.56■□□□□ 0.4
SYN2-205ENST00000620175 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.56■□□□□ 0.4
SYN2-205ENST00000620175 UQCRHLA0A096LP55 91 aa17.55■□□□□ 0.4
SYN2-205ENST00000620175 UQCRHP07919 91 aa17.55■□□□□ 0.4
SYN2-205ENST00000620175 GGT6Q6P531 493 aa17.54■□□□□ 0.4
SYN2-205ENST00000620175 TPM2P07951 284 aa17.54■□□□□ 0.4
SYN2-205ENST00000620175 TSR2Q969E8 191 aaKnown RBP17.54■□□□□ 0.4
SYN2-205ENST00000620175 ZKSCAN2Q63HK3 967 aa17.54■□□□□ 0.4
SYN2-205ENST00000620175 C1orf115Q9H7X2 142 aa17.53■□□□□ 0.4
SYN2-205ENST00000620175 ANKRD30BQ9BXX2 1392 aa17.53■□□□□ 0.4
SYN2-205ENST00000620175 PRPF40AO75400 957 aaKnown RBP17.53■□□□□ 0.4
SYN2-205ENST00000620175 NUTM2DQ5VT03 806 aaPredicted RBP17.53■□□□□ 0.4
SYN2-205ENST00000620175 DZIP1LQ8IYY4 767 aaKnown RBP17.53■□□□□ 0.4
SYN2-205ENST00000620175 DRC7Q8IY82 874 aa17.52■□□□□ 0.4
SYN2-205ENST00000620175 ANKRD30AQ9BXX3 1397 aa17.52■□□□□ 0.4
SYN2-205ENST00000620175 SLFN5Q08AF3 891 aa17.52■□□□□ 0.4
SYN2-205ENST00000620175 SKOR2Q2VWA4 1001 aaPredicted RBP17.52■□□□□ 0.4
SYN2-205ENST00000620175 EFCAB2Q5VUJ9 269 aa17.52■□□□□ 0.4
SYN2-205ENST00000620175 SPINK5Q9NQ38 1064 aaPredicted RBP17.52■□□□□ 0.39
SYN2-205ENST00000620175 CHAF1AQ13111 956 aaPredicted RBP17.51■□□□□ 0.39
SYN2-205ENST00000620175 BIVM-ERCC5R4GMW8 1640 aa17.51■□□□□ 0.39
SYN2-205ENST00000620175 CASKIN1Q8WXD9 1431 aa17.51■□□□□ 0.39
SYN2-205ENST00000620175 TCP11L2Q8N4U5 519 aa17.5■□□□□ 0.39
SYN2-205ENST00000620175 TNPO1Q92973 898 aaKnown RBP17.5■□□□□ 0.39
SYN2-205ENST00000620175 PDCL3Q9H2J4 239 aa17.5■□□□□ 0.39
SYN2-205ENST00000620175 CHMP3Q9Y3E7 222 aa17.5■□□□□ 0.39
SYN2-205ENST00000620175 DHX29Q7Z478 1369 aaKnown RBP17.5■□□□□ 0.39
SYN2-205ENST00000620175 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.49■□□□□ 0.39
SYN2-205ENST00000620175 CASC1Q6TDU7 716 aa17.49■□□□□ 0.39
SYN2-205ENST00000620175 IGSF3O75054 1194 aa17.49■□□□□ 0.39
SYN2-205ENST00000620175 PCDHB15Q9Y5E8 787 aa17.49■□□□□ 0.39
SYN2-205ENST00000620175 PRDM2Q13029 1718 aa17.49■□□□□ 0.39
SYN2-205ENST00000620175 CBX1P83916 185 aa17.48■□□□□ 0.39
SYN2-205ENST00000620175 TRAK1Q9UPV9 953 aa17.48■□□□□ 0.39
SYN2-205ENST00000620175 SSFA2P28290 1259 aa17.47■□□□□ 0.39
SYN2-205ENST00000620175 ZSCAN30Q86W11 494 aa17.47■□□□□ 0.39
SYN2-205ENST00000620175 ZNF771Q7L3S4 317 aaPredicted RBP17.47■□□□□ 0.39
SYN2-205ENST00000620175 STK26Q9P289 416 aa17.46■□□□□ 0.39
SYN2-205ENST00000620175 GRIN2AQ12879 1464 aa17.46■□□□□ 0.39
SYN2-205ENST00000620175 FAM177BA6PVY3 158 aa17.46■□□□□ 0.39
SYN2-205ENST00000620175 TBC1D32Q96NH3 1257 aa17.46■□□□□ 0.39
SYN2-205ENST00000620175 SOX12O15370 315 aa17.45■□□□□ 0.38
SYN2-205ENST00000620175 CCDC173Q0VFZ6 552 aa17.45■□□□□ 0.38
SYN2-205ENST00000620175 PDE3AQ14432 1141 aa17.45■□□□□ 0.38
SYN2-205ENST00000620175 RBM42Q9BTD8 480 aaKnown RBP17.45■□□□□ 0.38
SYN2-205ENST00000620175 SYNJ2O15056 1496 aa17.44■□□□□ 0.38
SYN2-205ENST00000620175 FAM69CQ0P6D2 419 aa17.44■□□□□ 0.38
SYN2-205ENST00000620175 PCF11O94913 1555 aaKnown RBP17.44■□□□□ 0.38
SYN2-205ENST00000620175 IPO8O15397 1037 aaKnown RBP17.44■□□□□ 0.38
SYN2-205ENST00000620175 CCDC144AA2RUR9 1427 aa17.43■□□□□ 0.38
SYN2-205ENST00000620175 PLB1Q6P1J6 1458 aa17.42■□□□□ 0.38
SYN2-205ENST00000620175 KIAA0586Q9BVV6 1533 aa17.42■□□□□ 0.38
SYN2-205ENST00000620175 ZNF592Q92610 1267 aa17.42■□□□□ 0.38
SYN2-205ENST00000620175 KIF3BO15066 747 aa17.41■□□□□ 0.38
SYN2-205ENST00000620175 EXOSC9Q06265 439 aaKnown RBP17.41■□□□□ 0.38
SYN2-205ENST00000620175 SRPK2P78362 688 aaKnown RBP17.41■□□□□ 0.38
SYN2-205ENST00000620175 DMRT2Q9Y5R5 561 aa17.41■□□□□ 0.38
SYN2-205ENST00000620175 KDM2BQ8NHM5 1336 aa17.41■□□□□ 0.38
SYN2-205ENST00000620175 AFAP1Q8N556 730 aa17.41■□□□□ 0.38
SYN2-205ENST00000620175 RBM27Q9P2N5 1060 aaKnown RBP17.41■□□□□ 0.38
SYN2-205ENST00000620175 RLBP1P12271 317 aa17.4■□□□□ 0.38
SYN2-205ENST00000620175 SYCE3A1L190 88 aa17.4■□□□□ 0.38
SYN2-205ENST00000620175 WWC1Q8IX03 1113 aa17.4■□□□□ 0.38
SYN2-205ENST00000620175 PLEKHH1Q9ULM0 1364 aa17.4■□□□□ 0.38
SYN2-205ENST00000620175 PTMSP20962 102 aa17.4■□□□□ 0.38
SYN2-205ENST00000620175 SPDYE4A6NLX3 237 aa17.39■□□□□ 0.37
SYN2-205ENST00000620175 TRIM6-TRIM34B2RNG4 842 aa17.39■□□□□ 0.37
SYN2-205ENST00000620175 MTHFSP49914 203 aa17.39■□□□□ 0.37
SYN2-205ENST00000620175 PTPN23Q9H3S7 1636 aa17.38■□□□□ 0.37
SYN2-205ENST00000620175 TSC1Q92574 1164 aa17.38■□□□□ 0.37
SYN2-205ENST00000620175 ZNF830Q96NB3 372 aaPredicted RBP17.38■□□□□ 0.37
SYN2-205ENST00000620175 DDX19BQ9UMR2 479 aa17.38■□□□□ 0.37
SYN2-205ENST00000620175 SLC4A10Q6U841 1118 aa17.38■□□□□ 0.37
SYN2-205ENST00000620175 GAS2L3Q86XJ1 694 aa17.38■□□□□ 0.37
SYN2-205ENST00000620175 FYCO1Q9BQS8 1478 aa17.38■□□□□ 0.37
SYN2-205ENST00000620175 CDK13Q14004 1512 aaKnown RBP17.38■□□□□ 0.37
SYN2-205ENST00000620175 ST18O60284 1047 aa17.38■□□□□ 0.37
SYN2-205ENST00000620175 SPAG9O60271 1321 aaKnown RBP17.37■□□□□ 0.37
SYN2-205ENST00000620175 NPHP1O15259 732 aa17.37■□□□□ 0.37
SYN2-205ENST00000620175 MIA2Q96PC5 1412 aa17.36■□□□□ 0.37
SYN2-205ENST00000620175 ANKRD50Q9ULJ7 1429 aa17.36■□□□□ 0.37
SYN2-205ENST00000620175 GOLGA6L4A6NEF3 574 aa17.36■□□□□ 0.37
SYN2-205ENST00000620175 NOB1Q9ULX3 412 aaKnown RBP17.36■□□□□ 0.37
SYN2-205ENST00000620175 RARSP54136 660 aaKnown RBP17.36■□□□□ 0.37
SYN2-205ENST00000620175 SPC24Q8NBT2 197 aa17.36■□□□□ 0.37
SYN2-205ENST00000620175 MAGI1Q96QZ7 1491 aaPredicted RBP17.36■□□□□ 0.37
SYN2-205ENST00000620175 RPRD2Q5VT52 1461 aaKnown RBP17.35■□□□□ 0.37
SYN2-205ENST00000620175 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.35■□□□□ 0.37
SYN2-205ENST00000620175 RUNDC1Q96C34 613 aa17.35■□□□□ 0.37
SYN2-205ENST00000620175 K7ELQ4 463 aaPredicted RBP17.34■□□□□ 0.37
SYN2-205ENST00000620175 RILPL2Q969X0 211 aa17.34■□□□□ 0.37
SYN2-205ENST00000620175 CSPP1Q1MSJ5 1256 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms