RNA–Protein interactions for RNA: ENST00000619587.1

LHX3-203, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-203ENST00000619587 APAF1O14727 1248 aa22.21■■□□□ 1.15
LHX3-203ENST00000619587 ANTXR1Q9H6X2 564 aa22.21■■□□□ 1.15
LHX3-203ENST00000619587 DMRT2Q9Y5R5 561 aa22.21■■□□□ 1.15
LHX3-203ENST00000619587 NKTRP30414 1462 aaKnown RBP22.21■■□□□ 1.15
LHX3-203ENST00000619587 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.21■■□□□ 1.15
LHX3-203ENST00000619587 L1TD1Q5T7N2 865 aaKnown RBP22.2■■□□□ 1.14
LHX3-203ENST00000619587 CLASP1Q7Z460 1538 aa22.19■■□□□ 1.14
LHX3-203ENST00000619587 PLEKHD1A6NEE1 506 aa22.19■■□□□ 1.14
LHX3-203ENST00000619587 GRIN2AQ12879 1464 aa22.19■■□□□ 1.14
LHX3-203ENST00000619587 PANK1Q8TE04 598 aa22.18■■□□□ 1.14
LHX3-203ENST00000619587 COG6Q9Y2V7 657 aa22.17■■□□□ 1.14
LHX3-203ENST00000619587 XRCC6P12956 609 aaKnown RBP eCLIP22.16■■□□□ 1.14
LHX3-203ENST00000619587 CLUAP1Q96AJ1 413 aa22.15■■□□□ 1.14
LHX3-203ENST00000619587 MAPK8IP3Q9UPT6 1336 aa22.15■■□□□ 1.14
LHX3-203ENST00000619587 MAGI1Q96QZ7 1491 aaPredicted RBP22.15■■□□□ 1.14
LHX3-203ENST00000619587 PANK2Q9BZ23 570 aa22.14■■□□□ 1.14
LHX3-203ENST00000619587 SPRYD3Q8NCJ5 442 aa22.14■■□□□ 1.13
LHX3-203ENST00000619587 EIF2AK4Q9P2K8 1649 aaKnown RBP22.14■■□□□ 1.13
LHX3-203ENST00000619587 TBC1D2Q9BYX2 928 aa22.14■■□□□ 1.13
LHX3-203ENST00000619587 GZF1Q9H116 711 aaPredicted RBP22.13■■□□□ 1.13
LHX3-203ENST00000619587 CGNL1Q0VF96 1302 aa22.13■■□□□ 1.13
LHX3-203ENST00000619587 CCDC141Q6ZP82 1450 aa22.12■■□□□ 1.13
LHX3-203ENST00000619587 ARHGEF5Q12774 1597 aa22.12■■□□□ 1.13
LHX3-203ENST00000619587 E9PSI1 815 aa22.12■■□□□ 1.13
LHX3-203ENST00000619587 VSIG10Q8N0Z9 540 aa22.11■■□□□ 1.13
LHX3-203ENST00000619587 SYNJ2O15056 1496 aa22.11■■□□□ 1.13
LHX3-203ENST00000619587 PIK3C2GO75747 1445 aa22.11■■□□□ 1.13
LHX3-203ENST00000619587 CANXP27824 592 aaKnown RBP22.11■■□□□ 1.13
LHX3-203ENST00000619587 NAP1L5Q96NT1 182 aaPredicted RBP22.1■■□□□ 1.13
LHX3-203ENST00000619587 PDE3AQ14432 1141 aa22.1■■□□□ 1.13
LHX3-203ENST00000619587 GOLGA6L3A6NEY3 463 aa22.09■■□□□ 1.13
LHX3-203ENST00000619587 TBC1D32Q96NH3 1257 aa22.09■■□□□ 1.13
LHX3-203ENST00000619587 ASXL1Q8IXJ9 1541 aa22.09■■□□□ 1.13
LHX3-203ENST00000619587 ATP10BO94823 1461 aa22.09■■□□□ 1.13
LHX3-203ENST00000619587 RNF17Q9BXT8 1623 aaKnown RBP22.09■■□□□ 1.13
LHX3-203ENST00000619587 ZMYND15Q9H091 742 aa22.08■■□□□ 1.13
LHX3-203ENST00000619587 CENPJQ9HC77 1338 aaPredicted RBP22.08■■□□□ 1.13
LHX3-203ENST00000619587 ABCA8O94911 1581 aa22.08■■□□□ 1.12
LHX3-203ENST00000619587 NUP160Q12769 1436 aa22.08■■□□□ 1.12
LHX3-203ENST00000619587 FSD2A1L4K1 749 aa22.08■■□□□ 1.12
LHX3-203ENST00000619587 ABCC2Q92887 1545 aa22.08■■□□□ 1.12
LHX3-203ENST00000619587 SAMD9LQ8IVG5 1584 aa22.07■■□□□ 1.12
LHX3-203ENST00000619587 MRC2Q9UBG0 1479 aa22.06■■□□□ 1.12
LHX3-203ENST00000619587 PNNQ9H307 717 aaKnown RBP22.06■■□□□ 1.12
LHX3-203ENST00000619587 TNNQ9UQP3 1299 aa22.06■■□□□ 1.12
LHX3-203ENST00000619587 UPF2Q9HAU5 1272 aaKnown RBP22.05■■□□□ 1.12
LHX3-203ENST00000619587 MCM4P33991 863 aa22.05■■□□□ 1.12
LHX3-203ENST00000619587 PCDHB15Q9Y5E8 787 aa22.05■■□□□ 1.12
LHX3-203ENST00000619587 UNC13BO14795 1591 aa22.04■■□□□ 1.12
LHX3-203ENST00000619587 SYNMO15061 1565 aa22.04■■□□□ 1.12
LHX3-203ENST00000619587 HSP90AA2PQ14568 343 aaPredicted RBP22.04■■□□□ 1.12
LHX3-203ENST00000619587 PDZRN3Q9UPQ7 1066 aa22.03■■□□□ 1.12
LHX3-203ENST00000619587 IFT140Q96RY7 1462 aa22.03■■□□□ 1.12
LHX3-203ENST00000619587 HSP90AA1P07900 732 aaKnown RBP22.02■■□□□ 1.12
LHX3-203ENST00000619587 CLCN1P35523 988 aa22.02■■□□□ 1.12
LHX3-203ENST00000619587 RLBP1P12271 317 aa22.02■■□□□ 1.11
LHX3-203ENST00000619587 CARMIL2Q6F5E8 1435 aa22.01■■□□□ 1.11
LHX3-203ENST00000619587 IQGAP1P46940 1657 aa22.01■■□□□ 1.11
LHX3-203ENST00000619587 MYOM1P52179 1685 aa22.01■■□□□ 1.11
LHX3-203ENST00000619587 FBLN2P98095 1184 aa22.01■■□□□ 1.11
LHX3-203ENST00000619587 JPH4Q96JJ6 628 aa22.01■■□□□ 1.11
LHX3-203ENST00000619587 CDC42BPBQ9Y5S2 1711 aa22.01■■□□□ 1.11
LHX3-203ENST00000619587 RRP9O43818 475 aaKnown RBP22.01■■□□□ 1.11
LHX3-203ENST00000619587 CHMP7Q8WUX9 453 aaPredicted RBP22■■□□□ 1.11
LHX3-203ENST00000619587 WWC1Q8IX03 1113 aa21.99■■□□□ 1.11
LHX3-203ENST00000619587 NINLQ9Y2I6 1382 aa21.98■■□□□ 1.11
LHX3-203ENST00000619587 IQGAP3Q86VI3 1631 aa21.98■■□□□ 1.11
LHX3-203ENST00000619587 NEUROD2Q15784 382 aa21.98■■□□□ 1.11
LHX3-203ENST00000619587 BCL2L13Q9BXK5 485 aa21.98■■□□□ 1.11
LHX3-203ENST00000619587 SYCP2Q9BX26 1530 aa21.97■■□□□ 1.11
LHX3-203ENST00000619587 TRAK2O60296 914 aa21.97■■□□□ 1.11
LHX3-203ENST00000619587 PMFBP1Q8TBY8 1022 aa21.97■■□□□ 1.11
LHX3-203ENST00000619587 PLXNC1O60486 1568 aa21.97■■□□□ 1.11
LHX3-203ENST00000619587 CDCA8Q53HL2 280 aa21.96■■□□□ 1.11
LHX3-203ENST00000619587 MADDQ8WXG6 1647 aa21.96■■□□□ 1.11
LHX3-203ENST00000619587 RARSP54136 660 aaKnown RBP21.95■■□□□ 1.1
LHX3-203ENST00000619587 RRP7AQ9Y3A4 280 aaKnown RBP21.95■■□□□ 1.1
LHX3-203ENST00000619587 NPC1L1Q9UHC9 1359 aa21.95■■□□□ 1.1
LHX3-203ENST00000619587 PREX2Q70Z35 1606 aa21.93■■□□□ 1.1
LHX3-203ENST00000619587 ATP10AO60312 1499 aa21.93■■□□□ 1.1
LHX3-203ENST00000619587 CHMP5Q9NZZ3 219 aa21.93■■□□□ 1.1
LHX3-203ENST00000619587 RTEL1-TNFRSF6BF6WH68 1400 aa21.92■■□□□ 1.1
LHX3-203ENST00000619587 ERBB4Q15303 1308 aa21.92■■□□□ 1.1
LHX3-203ENST00000619587 SCAF11Q99590 1463 aaKnown RBP21.92■■□□□ 1.1
LHX3-203ENST00000619587 MFAP1P55081 439 aaKnown RBP21.92■■□□□ 1.1
LHX3-203ENST00000619587 RSPH4AQ5TD94 716 aa21.91■■□□□ 1.1
LHX3-203ENST00000619587 MRE11P49959 708 aa21.91■■□□□ 1.1
LHX3-203ENST00000619587 CARD14Q9BXL6 1004 aa21.91■■□□□ 1.1
LHX3-203ENST00000619587 C22orf23Q9BZE7 217 aa21.9■■□□□ 1.1
LHX3-203ENST00000619587 GRPEL1Q9HAV7 217 aa21.89■■□□□ 1.1
LHX3-203ENST00000619587 ZMYM3Q14202 1370 aa21.88■■□□□ 1.09
LHX3-203ENST00000619587 NGEFQ8N5V2 710 aa21.88■■□□□ 1.09
LHX3-203ENST00000619587 RWDD1Q9H446 243 aaPredicted RBP21.88■■□□□ 1.09
LHX3-203ENST00000619587 MYH16Q9H6N6 1097 aa21.87■■□□□ 1.09
LHX3-203ENST00000619587 KDM5AP29375 1690 aaKnown RBP21.87■■□□□ 1.09
LHX3-203ENST00000619587 ESPNB1AK53 854 aa21.86■■□□□ 1.09
LHX3-203ENST00000619587 MAST1Q9Y2H9 1570 aa21.86■■□□□ 1.09
LHX3-203ENST00000619587 CEP152O94986 1710 aa21.86■■□□□ 1.09
LHX3-203ENST00000619587 ZNF692Q9BU19 519 aaPredicted RBP21.85■■□□□ 1.09
LHX3-203ENST00000619587 ARHGAP5Q13017 1502 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms