RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 NAP1L5Q96NT1 182 aaPredicted RBP20.84■□□□□ 0.93
SEMA3B-214ENST00000619119 RRAGDQ9NQL2 400 aaPredicted RBP20.83■□□□□ 0.92
SEMA3B-214ENST00000619119 RIMBP3CA6NJZ7 1639 aa20.81■□□□□ 0.92
SEMA3B-214ENST00000619119 RIMBP3BA6NNM3 1639 aa20.81■□□□□ 0.92
SEMA3B-214ENST00000619119 RIMBP3Q9UFD9 1639 aa20.81■□□□□ 0.92
SEMA3B-214ENST00000619119 CHGAP10645 457 aaKnown RBP20.8■□□□□ 0.92
SEMA3B-214ENST00000619119 DEPDC5O75140 1603 aa20.79■□□□□ 0.92
SEMA3B-214ENST00000619119 BACH2Q9BYV9 841 aa20.79■□□□□ 0.92
SEMA3B-214ENST00000619119 TCERG1O14776 1098 aaKnown RBP20.79■□□□□ 0.92
SEMA3B-214ENST00000619119 UGGT1Q9NYU2 1555 aa20.78■□□□□ 0.92
SEMA3B-214ENST00000619119 MROH1Q8NDA8 1641 aa20.76■□□□□ 0.91
SEMA3B-214ENST00000619119 CFAP74Q9C0B2 1584 aa20.76■□□□□ 0.91
SEMA3B-214ENST00000619119 TRPM1Q7Z4N2 1603 aa20.76■□□□□ 0.91
SEMA3B-214ENST00000619119 DDRGK1Q96HY6 314 aa20.76■□□□□ 0.91
SEMA3B-214ENST00000619119 TET3O43151 1660 aa20.76■□□□□ 0.91
SEMA3B-214ENST00000619119 HSP90AA1P07900 732 aaKnown RBP20.75■□□□□ 0.91
SEMA3B-214ENST00000619119 TRPM2O94759 1503 aa20.75■□□□□ 0.91
SEMA3B-214ENST00000619119 PTPRTO14522 1441 aa20.75■□□□□ 0.91
SEMA3B-214ENST00000619119 PRDM15P57071 1507 aaPredicted RBP20.75■□□□□ 0.91
SEMA3B-214ENST00000619119 NUDCQ9Y266 331 aa20.75■□□□□ 0.91
SEMA3B-214ENST00000619119 CLTCL1P53675 1640 aa20.75■□□□□ 0.91
SEMA3B-214ENST00000619119 MLH3Q9UHC1 1453 aa20.74■□□□□ 0.91
SEMA3B-214ENST00000619119 SPHKAPQ2M3C7 1700 aa20.74■□□□□ 0.91
SEMA3B-214ENST00000619119 FRAT2O75474 233 aaPredicted RBP20.74■□□□□ 0.91
SEMA3B-214ENST00000619119 HECW2Q9P2P5 1572 aa20.74■□□□□ 0.91
SEMA3B-214ENST00000619119 NEO1Q92859 1461 aa20.73■□□□□ 0.91
SEMA3B-214ENST00000619119 CFAP65Q6ZU64 1925 aaKnown RBP20.73■□□□□ 0.91
SEMA3B-214ENST00000619119 VWDEQ8N2E2 1590 aa20.73■□□□□ 0.91
SEMA3B-214ENST00000619119 RRP9O43818 475 aaKnown RBP20.72■□□□□ 0.91
SEMA3B-214ENST00000619119 POLR1AO95602 1720 aaPredicted RBP20.72■□□□□ 0.91
SEMA3B-214ENST00000619119 EIF2AK4Q9P2K8 1649 aaKnown RBP20.72■□□□□ 0.91
SEMA3B-214ENST00000619119 SMG6Q86US8 1419 aaKnown RBP20.72■□□□□ 0.91
SEMA3B-214ENST00000619119 FRMPD1Q5SYB0 1578 aa20.71■□□□□ 0.91
SEMA3B-214ENST00000619119 ABCA6Q8N139 1617 aa20.7■□□□□ 0.9
SEMA3B-214ENST00000619119 YEATS2Q9ULM3 1422 aa20.7■□□□□ 0.9
SEMA3B-214ENST00000619119 ARID4BQ4LE39 1312 aaPredicted RBP20.69■□□□□ 0.9
SEMA3B-214ENST00000619119 GPRASP1Q5JY77 1395 aa20.69■□□□□ 0.9
SEMA3B-214ENST00000619119 CEP152O94986 1710 aa20.69■□□□□ 0.9
SEMA3B-214ENST00000619119 SENP3Q9H4L4 574 aaPredicted RBP20.68■□□□□ 0.9
SEMA3B-214ENST00000619119 RNF123Q5XPI4 1314 aa20.68■□□□□ 0.9
SEMA3B-214ENST00000619119 PPRC1Q5VV67 1664 aaKnown RBP20.68■□□□□ 0.9
SEMA3B-214ENST00000619119 EFCAB6Q5THR3 1501 aa20.67■□□□□ 0.9
SEMA3B-214ENST00000619119 TESK2Q96S53 571 aa20.67■□□□□ 0.9
SEMA3B-214ENST00000619119 TSPOAP1O95153 1857 aa20.67■□□□□ 0.9
SEMA3B-214ENST00000619119 RBM10P98175 930 aaKnown RBP20.67■□□□□ 0.9
SEMA3B-214ENST00000619119 SKAP1Q86WV1 359 aa20.67■□□□□ 0.9
SEMA3B-214ENST00000619119 PNNQ9H307 717 aaKnown RBP20.67■□□□□ 0.9
SEMA3B-214ENST00000619119 DISP3Q9P2K9 1392 aa20.66■□□□□ 0.9
SEMA3B-214ENST00000619119 EXOC6Q8TAG9 804 aa20.66■□□□□ 0.9
SEMA3B-214ENST00000619119 ARXQ96QS3 562 aa20.66■□□□□ 0.9
SEMA3B-214ENST00000619119 ADGRF5Q8IZF2 1346 aa20.66■□□□□ 0.9
SEMA3B-214ENST00000619119 CFAP70Q5T0N1 1121 aa20.66■□□□□ 0.9
SEMA3B-214ENST00000619119 NPATQ14207 1427 aa20.66■□□□□ 0.9
SEMA3B-214ENST00000619119 MAP3K4Q9Y6R4 1608 aa20.65■□□□□ 0.9
SEMA3B-214ENST00000619119 NUTM2DQ5VT03 806 aaPredicted RBP20.65■□□□□ 0.9
SEMA3B-214ENST00000619119 MS4A1P11836 297 aa20.62■□□□□ 0.89
SEMA3B-214ENST00000619119 TMF1P82094 1093 aa20.62■□□□□ 0.89
SEMA3B-214ENST00000619119 DIP2CQ9Y2E4 1556 aa20.61■□□□□ 0.89
SEMA3B-214ENST00000619119 MADDQ8WXG6 1647 aa20.61■□□□□ 0.89
SEMA3B-214ENST00000619119 RNF17Q9BXT8 1623 aaKnown RBP20.6■□□□□ 0.89
SEMA3B-214ENST00000619119 DIP2BQ9P265 1576 aa20.59■□□□□ 0.89
SEMA3B-214ENST00000619119 RICTORQ6R327 1708 aa20.59■□□□□ 0.89
SEMA3B-214ENST00000619119 POGKQ9P215 609 aa20.58■□□□□ 0.89
SEMA3B-214ENST00000619119 ABCC3O15438 1527 aa20.58■□□□□ 0.88
SEMA3B-214ENST00000619119 LMTK2Q8IWU2 1503 aa20.57■□□□□ 0.88
SEMA3B-214ENST00000619119 MLECQ14165 292 aa20.57■□□□□ 0.88
SEMA3B-214ENST00000619119 CC2D1BQ5T0F9 858 aaKnown RBP20.57■□□□□ 0.88
SEMA3B-214ENST00000619119 PANK3Q9H999 370 aa20.57■□□□□ 0.88
SEMA3B-214ENST00000619119 GLI2P10070 1586 aa20.56■□□□□ 0.88
SEMA3B-214ENST00000619119 NOS1P29475 1434 aa20.56■□□□□ 0.88
SEMA3B-214ENST00000619119 COL17A1Q9UMD9 1497 aaPredicted RBP20.56■□□□□ 0.88
SEMA3B-214ENST00000619119 TMC1Q8TDI8 760 aa20.56■□□□□ 0.88
SEMA3B-214ENST00000619119 AAMPQ13685 434 aa20.55■□□□□ 0.88
SEMA3B-214ENST00000619119 STAC3Q96MF2 364 aa20.54■□□□□ 0.88
SEMA3B-214ENST00000619119 KIF1BO60333 1816 aa20.54■□□□□ 0.88
SEMA3B-214ENST00000619119 MROH2AA6NES4 1674 aa20.54■□□□□ 0.88
SEMA3B-214ENST00000619119 AEBP2Q6ZN18 517 aaPredicted RBP20.52■□□□□ 0.88
SEMA3B-214ENST00000619119 SCAF11Q99590 1463 aaKnown RBP20.52■□□□□ 0.88
SEMA3B-214ENST00000619119 LAMC1P11047 1609 aa20.52■□□□□ 0.88
SEMA3B-214ENST00000619119 TMEM132EQ6IEE7 984 aa20.52■□□□□ 0.88
SEMA3B-214ENST00000619119 RRP1P56182 461 aaKnown RBP20.51■□□□□ 0.87
SEMA3B-214ENST00000619119 FBXO31Q5XUX0 539 aaPredicted RBP20.51■□□□□ 0.87
SEMA3B-214ENST00000619119 IDI1Q13907 227 aa20.5■□□□□ 0.87
SEMA3B-214ENST00000619119 PER1O15534 1290 aaPredicted RBP20.5■□□□□ 0.87
SEMA3B-214ENST00000619119 TRAK1Q9UPV9 953 aa20.5■□□□□ 0.87
SEMA3B-214ENST00000619119 CAMSAP1Q5T5Y3 1602 aa20.48■□□□□ 0.87
SEMA3B-214ENST00000619119 KTN1Q86UP2 1357 aaKnown RBP20.47■□□□□ 0.87
SEMA3B-214ENST00000619119 FGD1P98174 961 aa20.47■□□□□ 0.87
SEMA3B-214ENST00000619119 L1TD1Q5T7N2 865 aaKnown RBP20.47■□□□□ 0.87
SEMA3B-214ENST00000619119 MYBBP1AQ9BQG0 1328 aaKnown RBP20.47■□□□□ 0.87
SEMA3B-214ENST00000619119 RALBP1Q15311 655 aa20.47■□□□□ 0.87
SEMA3B-214ENST00000619119 SIGLEC1Q9BZZ2 1709 aa20.47■□□□□ 0.87
SEMA3B-214ENST00000619119 ADGRB3O60242 1522 aa20.46■□□□□ 0.87
SEMA3B-214ENST00000619119 CLCN1P35523 988 aa20.46■□□□□ 0.87
SEMA3B-214ENST00000619119 MYOM2P54296 1465 aa20.46■□□□□ 0.87
SEMA3B-214ENST00000619119 EIF3AQ14152 1382 aaKnown RBP20.46■□□□□ 0.87
SEMA3B-214ENST00000619119 IQGAP1P46940 1657 aa20.45■□□□□ 0.86
SEMA3B-214ENST00000619119 PNISRQ8TF01 805 aaKnown RBP20.44■□□□□ 0.86
SEMA3B-214ENST00000619119 RGS3P49796 1198 aa20.44■□□□□ 0.86
SEMA3B-214ENST00000619119 PDE4CQ08493 712 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms