RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 NPHP4O75161 1426 aaPredicted RBP7.74□□□□□ -1.17
SHMT1-211ENST00000618902 MYO5BQ9ULV0 1848 aa7.73□□□□□ -1.17
SHMT1-211ENST00000618902 ADGRB3O60242 1522 aa7.73□□□□□ -1.17
SHMT1-211ENST00000618902 TXNDC2Q86VQ3 553 aa7.73□□□□□ -1.17
SHMT1-211ENST00000618902 TMEM131LA2VDJ0 1609 aa7.73□□□□□ -1.17
SHMT1-211ENST00000618902 LTBP4Q8N2S1 1624 aa7.73□□□□□ -1.17
SHMT1-211ENST00000618902 DHX57Q6P158 1386 aaKnown RBP7.72□□□□□ -1.17
SHMT1-211ENST00000618902 PIK3R4Q99570 1358 aa7.72□□□□□ -1.17
SHMT1-211ENST00000618902 NEURL4Q96JN8 1562 aa7.72□□□□□ -1.17
SHMT1-211ENST00000618902 ZFYVE9O95405 1425 aa7.72□□□□□ -1.17
SHMT1-211ENST00000618902 NCOA3Q9Y6Q9 1424 aa7.72□□□□□ -1.17
SHMT1-211ENST00000618902 ILDR1Q86SU0 546 aaPredicted RBP7.72□□□□□ -1.17
SHMT1-211ENST00000618902 RPGRIP1LQ68CZ1 1315 aa7.72□□□□□ -1.17
SHMT1-211ENST00000618902 SPATA31E1Q6ZUB1 1445 aa7.71□□□□□ -1.17
SHMT1-211ENST00000618902 IQGAP1P46940 1657 aa7.71□□□□□ -1.18
SHMT1-211ENST00000618902 TOM1O60784 492 aa7.71□□□□□ -1.18
SHMT1-211ENST00000618902 CHGAP10645 457 aaKnown RBP7.71□□□□□ -1.18
SHMT1-211ENST00000618902 STAC3Q96MF2 364 aa7.71□□□□□ -1.18
SHMT1-211ENST00000618902 PLEKHG1Q9ULL1 1385 aa7.71□□□□□ -1.18
SHMT1-211ENST00000618902 RIMS2Q9UQ26 1411 aa7.7□□□□□ -1.18
SHMT1-211ENST00000618902 NUTM2DQ5VT03 806 aaPredicted RBP7.7□□□□□ -1.18
SHMT1-211ENST00000618902 TBX22Q9Y458 520 aa7.7□□□□□ -1.18
SHMT1-211ENST00000618902 KCNA6P17658 529 aa7.69□□□□□ -1.18
SHMT1-211ENST00000618902 ADRA2BP18089 450 aa7.69□□□□□ -1.18
SHMT1-211ENST00000618902 CCDC144AA2RUR9 1427 aa7.69□□□□□ -1.18
SHMT1-211ENST00000618902 DIP2AQ14689 1571 aa7.68□□□□□ -1.18
SHMT1-211ENST00000618902 VGFO15240 615 aaPredicted RBP7.68□□□□□ -1.18
SHMT1-211ENST00000618902 SIN3AQ96ST3 1273 aa7.68□□□□□ -1.18
SHMT1-211ENST00000618902 ZNF335Q9H4Z2 1342 aaPredicted RBP7.68□□□□□ -1.18
SHMT1-211ENST00000618902 NEXMIFQ5QGS0 1516 aa7.68□□□□□ -1.18
SHMT1-211ENST00000618902 PPP1R15AO75807 674 aaPredicted RBP7.67□□□□□ -1.18
SHMT1-211ENST00000618902 RGL3Q3MIN7 710 aa7.67□□□□□ -1.18
SHMT1-211ENST00000618902 NKTRP30414 1462 aaKnown RBP7.67□□□□□ -1.18
SHMT1-211ENST00000618902 KIF1BO60333 1816 aa7.66□□□□□ -1.18
SHMT1-211ENST00000618902 ZNF326Q5BKZ1 582 aaKnown RBP7.66□□□□□ -1.18
SHMT1-211ENST00000618902 ADAMTS13Q76LX8 1427 aa7.66□□□□□ -1.18
SHMT1-211ENST00000618902 ADGRF5Q8IZF2 1346 aa7.65□□□□□ -1.18
SHMT1-211ENST00000618902 SLC26A8Q96RN1 970 aa7.65□□□□□ -1.18
SHMT1-211ENST00000618902 NRXN3Q9Y4C0 1643 aa7.65□□□□□ -1.18
SHMT1-211ENST00000618902 STRCP1A6NGW2 1772 aa7.64□□□□□ -1.19
SHMT1-211ENST00000618902 PPLO60437 1756 aa7.64□□□□□ -1.19
SHMT1-211ENST00000618902 LRRC7Q96NW7 1537 aa7.63□□□□□ -1.19
SHMT1-211ENST00000618902 PRAG1Q86YV5 1406 aa7.63□□□□□ -1.19
SHMT1-211ENST00000618902 UBAP1LF5GYI3 381 aa7.63□□□□□ -1.19
SHMT1-211ENST00000618902 IFT172Q9UG01 1749 aa7.63□□□□□ -1.19
SHMT1-211ENST00000618902 NWD1Q149M9 1564 aa7.63□□□□□ -1.19
SHMT1-211ENST00000618902 SETBP1Q9Y6X0 1596 aa7.63□□□□□ -1.19
SHMT1-211ENST00000618902 NRXN1Q9ULB1 1477 aa7.62□□□□□ -1.19
SHMT1-211ENST00000618902 PTPRUQ92729 1446 aa7.62□□□□□ -1.19
SHMT1-211ENST00000618902 METP08581 1390 aa7.62□□□□□ -1.19
SHMT1-211ENST00000618902 NEUROD1Q13562 356 aa7.62□□□□□ -1.19
SHMT1-211ENST00000618902 BCANQ96GW7 911 aa7.62□□□□□ -1.19
SHMT1-211ENST00000618902 DCCP43146 1447 aa7.61□□□□□ -1.19
SHMT1-211ENST00000618902 FAM135BQ49AJ0 1406 aa7.61□□□□□ -1.19
SHMT1-211ENST00000618902 KCNA4P22459 653 aa7.61□□□□□ -1.19
SHMT1-211ENST00000618902 CADPS2Q86UW7 1296 aa7.61□□□□□ -1.19
SHMT1-211ENST00000618902 L3MBTL2Q969R5 705 aa7.61□□□□□ -1.19
SHMT1-211ENST00000618902 C19orf44Q9H6X5 657 aa7.61□□□□□ -1.19
SHMT1-211ENST00000618902 ASXL1Q8IXJ9 1541 aa7.61□□□□□ -1.19
SHMT1-211ENST00000618902 SETD1AO15047 1707 aaKnown RBP7.61□□□□□ -1.19
SHMT1-211ENST00000618902 PIK3C2GO75747 1445 aa7.61□□□□□ -1.19
SHMT1-211ENST00000618902 MSH6P52701 1360 aa7.6□□□□□ -1.19
SHMT1-211ENST00000618902 CHD2O14647 1828 aaKnown RBP7.6□□□□□ -1.19
SHMT1-211ENST00000618902 PROSER2Q86WR7 435 aaPredicted RBP7.6□□□□□ -1.19
SHMT1-211ENST00000618902 DCAF11Q8TEB1 546 aa7.6□□□□□ -1.19
SHMT1-211ENST00000618902 KDM2AQ9Y2K7 1162 aa7.6□□□□□ -1.19
SHMT1-211ENST00000618902 MYOM2P54296 1465 aa7.6□□□□□ -1.19
SHMT1-211ENST00000618902 ALKQ9UM73 1620 aa7.6□□□□□ -1.19
SHMT1-211ENST00000618902 TMEM94Q12767 1356 aa7.59□□□□□ -1.19
SHMT1-211ENST00000618902 CFAP70Q5T0N1 1121 aa7.59□□□□□ -1.19
SHMT1-211ENST00000618902 SIRT1Q96EB6 747 aa7.59□□□□□ -1.19
SHMT1-211ENST00000618902 RBM33Q96EV2 1170 aaKnown RBP7.59□□□□□ -1.19
SHMT1-211ENST00000618902 NBPF8Q3BBV2 869 aa7.58□□□□□ -1.2
SHMT1-211ENST00000618902 TMEM132EQ6IEE7 984 aa7.58□□□□□ -1.2
SHMT1-211ENST00000618902 C14orf93Q9H972 538 aaKnown RBP7.58□□□□□ -1.2
SHMT1-211ENST00000618902 AMOTL2Q9Y2J4 779 aa7.58□□□□□ -1.2
SHMT1-211ENST00000618902 PTCH1Q13635 1447 aa7.58□□□□□ -1.2
SHMT1-211ENST00000618902 SLAIN2Q9P270 581 aa7.57□□□□□ -1.2
SHMT1-211ENST00000618902 XRN1Q8IZH2 1706 aaKnown RBP7.57□□□□□ -1.2
SHMT1-211ENST00000618902 ROBO2Q9HCK4 1378 aa7.57□□□□□ -1.2
SHMT1-211ENST00000618902 ADGRB1O14514 1584 aa7.56□□□□□ -1.2
SHMT1-211ENST00000618902 ATF3P18847 181 aa7.56□□□□□ -1.2
SHMT1-211ENST00000618902 NBPF1Q3BBV0 1214 aa7.56□□□□□ -1.2
SHMT1-211ENST00000618902 CCER1Q8TC90 406 aaPredicted RBP7.56□□□□□ -1.2
SHMT1-211ENST00000618902 CLSPNQ9HAW4 1339 aa7.55□□□□□ -1.2
SHMT1-211ENST00000618902 XIRP1Q702N8 1843 aaKnown RBP7.55□□□□□ -1.2
SHMT1-211ENST00000618902 TECPR2O15040 1411 aa7.55□□□□□ -1.2
SHMT1-211ENST00000618902 LRPPRCP42704 1394 aaKnown RBP7.55□□□□□ -1.2
SHMT1-211ENST00000618902 ABCC11Q96J66 1382 aa7.55□□□□□ -1.2
SHMT1-211ENST00000618902 PLEKHH1Q9ULM0 1364 aa7.55□□□□□ -1.2
SHMT1-211ENST00000618902 YTHDC2Q9H6S0 1430 aaKnown RBP7.54□□□□□ -1.2
SHMT1-211ENST00000618902 STK26Q9P289 416 aa7.54□□□□□ -1.2
SHMT1-211ENST00000618902 WAPLQ7Z5K2 1190 aa7.53□□□□□ -1.2
SHMT1-211ENST00000618902 TONSLQ96HA7 1378 aa7.53□□□□□ -1.2
SHMT1-211ENST00000618902 ADGRL3Q9HAR2 1447 aa7.52□□□□□ -1.2
SHMT1-211ENST00000618902 LAMC1P11047 1609 aa7.52□□□□□ -1.2
SHMT1-211ENST00000618902 PIP4K2BP78356 416 aa7.52□□□□□ -1.21
SHMT1-211ENST00000618902 C14orf37Q86TY3 774 aa7.52□□□□□ -1.21
SHMT1-211ENST00000618902 HSPA1LP34931 641 aa7.51□□□□□ -1.21
SHMT1-211ENST00000618902 TRAK1Q9UPV9 953 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms