RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 NCOA2Q15596 1464 aa17.34■□□□□ 0.37
AP003900.1-202ENST00000616952 AHDC1Q5TGY3 1603 aaPredicted RBP17.34■□□□□ 0.37
AP003900.1-202ENST00000616952 DHX29Q7Z478 1369 aaKnown RBP17.34■□□□□ 0.37
AP003900.1-202ENST00000616952 PROSER2Q86WR7 435 aaPredicted RBP17.34■□□□□ 0.37
AP003900.1-202ENST00000616952 TXNDC2Q86VQ3 553 aa17.33■□□□□ 0.36
AP003900.1-202ENST00000616952 KIF3BO15066 747 aa17.32■□□□□ 0.36
AP003900.1-202ENST00000616952 KCNA6P17658 529 aa17.32■□□□□ 0.36
AP003900.1-202ENST00000616952 GPATCH8Q9UKJ3 1502 aaKnown RBP17.31■□□□□ 0.36
AP003900.1-202ENST00000616952 ERVK-7P63135 1459 aa17.31■□□□□ 0.36
AP003900.1-202ENST00000616952 QTRT2Q9H974 415 aaKnown RBP17.3■□□□□ 0.36
AP003900.1-202ENST00000616952 DIP2AQ14689 1571 aa17.3■□□□□ 0.36
AP003900.1-202ENST00000616952 NWD1Q149M9 1564 aa17.3■□□□□ 0.36
AP003900.1-202ENST00000616952 KDM5AP29375 1690 aaKnown RBP17.28■□□□□ 0.36
AP003900.1-202ENST00000616952 AKT1S1Q96B36 256 aa17.27■□□□□ 0.36
AP003900.1-202ENST00000616952 NGLY1Q96IV0 654 aa17.27■□□□□ 0.36
AP003900.1-202ENST00000616952 RTEL1-TNFRSF6BF6WH68 1400 aa17.27■□□□□ 0.35
AP003900.1-202ENST00000616952 CCDC18Q5T9S5 1454 aa17.26■□□□□ 0.35
AP003900.1-202ENST00000616952 CCDC125Q86Z20 511 aa17.26■□□□□ 0.35
AP003900.1-202ENST00000616952 EID1Q9Y6B2 187 aa17.26■□□□□ 0.35
AP003900.1-202ENST00000616952 NHSL1Q5SYE7 1610 aa17.25■□□□□ 0.35
AP003900.1-202ENST00000616952 ARHGAP35Q9NRY4 1499 aa17.24■□□□□ 0.35
AP003900.1-202ENST00000616952 YY1P25490 414 aa17.24■□□□□ 0.35
AP003900.1-202ENST00000616952 C8orf37Q96NL8 207 aa17.24■□□□□ 0.35
AP003900.1-202ENST00000616952 CHRDL2Q6WN34 429 aa17.22■□□□□ 0.35
AP003900.1-202ENST00000616952 CFDP1Q9UEE9 299 aaPredicted RBP17.22■□□□□ 0.35
AP003900.1-202ENST00000616952 CAMSAP2Q08AD1 1489 aa17.21■□□□□ 0.35
AP003900.1-202ENST00000616952 TMEM2Q9UHN6 1383 aa17.2■□□□□ 0.34
AP003900.1-202ENST00000616952 TET3O43151 1660 aa17.19■□□□□ 0.34
AP003900.1-202ENST00000616952 MBD5Q9P267 1494 aa17.18■□□□□ 0.34
AP003900.1-202ENST00000616952 SLC26A8Q96RN1 970 aa17.18■□□□□ 0.34
AP003900.1-202ENST00000616952 MAST1Q9Y2H9 1570 aa17.17■□□□□ 0.34
AP003900.1-202ENST00000616952 SETD5Q9C0A6 1442 aa17.15■□□□□ 0.34
AP003900.1-202ENST00000616952 BLMP54132 1417 aaPredicted RBP17.14■□□□□ 0.33
AP003900.1-202ENST00000616952 CCNB3Q8WWL7 1395 aa17.13■□□□□ 0.33
AP003900.1-202ENST00000616952 EEA1Q15075 1411 aa17.12■□□□□ 0.33
AP003900.1-202ENST00000616952 CASKIN1Q8WXD9 1431 aa17.12■□□□□ 0.33
AP003900.1-202ENST00000616952 NCOA3Q9Y6Q9 1424 aa17.12■□□□□ 0.33
AP003900.1-202ENST00000616952 BCL9LQ86UU0 1499 aa17.12■□□□□ 0.33
AP003900.1-202ENST00000616952 PIK3C2BO00750 1634 aa17.11■□□□□ 0.33
AP003900.1-202ENST00000616952 HRCP23327 699 aa17.11■□□□□ 0.33
AP003900.1-202ENST00000616952 ZNF644Q9H582 1327 aaPredicted RBP17.11■□□□□ 0.33
AP003900.1-202ENST00000616952 BRINP3Q76B58 766 aa17.1■□□□□ 0.33
AP003900.1-202ENST00000616952 CADPS2Q86UW7 1296 aa17.1■□□□□ 0.33
AP003900.1-202ENST00000616952 TRPC5Q9UL62 973 aaPredicted RBP17.1■□□□□ 0.33
AP003900.1-202ENST00000616952 DEFB132Q7Z7B7 95 aa17.09■□□□□ 0.33
AP003900.1-202ENST00000616952 EFCAB6Q5THR3 1501 aa17.09■□□□□ 0.33
AP003900.1-202ENST00000616952 MROH1Q8NDA8 1641 aa17.08■□□□□ 0.32
AP003900.1-202ENST00000616952 ASXL1Q8IXJ9 1541 aa17.08■□□□□ 0.32
AP003900.1-202ENST00000616952 PNPLA6Q8IY17 1366 aa17.08■□□□□ 0.32
AP003900.1-202ENST00000616952 PSDA5PKW4 1024 aaPredicted RBP17.08■□□□□ 0.32
AP003900.1-202ENST00000616952 REM2Q8IYK8 340 aaPredicted RBP17.08■□□□□ 0.32
AP003900.1-202ENST00000616952 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.07■□□□□ 0.32
AP003900.1-202ENST00000616952 CCDC141Q6ZP82 1450 aa17.07■□□□□ 0.32
AP003900.1-202ENST00000616952 ATRNO75882 1429 aa17.07■□□□□ 0.32
AP003900.1-202ENST00000616952 SENP3-EIF4A1A0A087X0R7 540 aa17.07■□□□□ 0.32
AP003900.1-202ENST00000616952 C14orf37Q86TY3 774 aa17.07■□□□□ 0.32
AP003900.1-202ENST00000616952 USP21Q9UK80 565 aa17.07■□□□□ 0.32
AP003900.1-202ENST00000616952 ATF3P18847 181 aa17.06■□□□□ 0.32
AP003900.1-202ENST00000616952 ADAMTS2O95450 1211 aa17.05■□□□□ 0.32
AP003900.1-202ENST00000616952 CEP152O94986 1710 aa17.04■□□□□ 0.32
AP003900.1-202ENST00000616952 LRRC59Q96AG4 307 aaKnown RBP17.04■□□□□ 0.32
AP003900.1-202ENST00000616952 STAG3Q9UJ98 1225 aa17.03■□□□□ 0.32
AP003900.1-202ENST00000616952 SPDYE2BA6NHP3 402 aa17.02■□□□□ 0.32
AP003900.1-202ENST00000616952 SPDYE6P0CI01 402 aa17.02■□□□□ 0.32
AP003900.1-202ENST00000616952 SPDYE2Q495Y8 402 aa17.02■□□□□ 0.32
AP003900.1-202ENST00000616952 C19orf44Q9H6X5 657 aa17.02■□□□□ 0.32
AP003900.1-202ENST00000616952 CHD2O14647 1828 aaKnown RBP17.02■□□□□ 0.31
AP003900.1-202ENST00000616952 FYCO1Q9BQS8 1478 aa17■□□□□ 0.31
AP003900.1-202ENST00000616952 UNC13BO14795 1591 aa17■□□□□ 0.31
AP003900.1-202ENST00000616952 ARHGAP31Q2M1Z3 1444 aa17■□□□□ 0.31
AP003900.1-202ENST00000616952 EIF2AK4Q9P2K8 1649 aaKnown RBP16.99■□□□□ 0.31
AP003900.1-202ENST00000616952 SF3B2Q13435 895 aaKnown RBP16.99■□□□□ 0.31
AP003900.1-202ENST00000616952 BCANQ96GW7 911 aa16.99■□□□□ 0.31
AP003900.1-202ENST00000616952 MKRN4PQ13434 485 aaPredicted RBP16.98■□□□□ 0.31
AP003900.1-202ENST00000616952 FNBP4Q8N3X1 1017 aaPredicted RBP16.98■□□□□ 0.31
AP003900.1-202ENST00000616952 CFAP65Q6ZU64 1925 aaKnown RBP16.98■□□□□ 0.31
AP003900.1-202ENST00000616952 DCCP43146 1447 aa16.96■□□□□ 0.3
AP003900.1-202ENST00000616952 ADGRB3O60242 1522 aa16.95■□□□□ 0.3
AP003900.1-202ENST00000616952 PTCH1Q13635 1447 aa16.95■□□□□ 0.3
AP003900.1-202ENST00000616952 UBTFP17480 764 aaKnown RBP16.94■□□□□ 0.3
AP003900.1-202ENST00000616952 PLEKHG1Q9ULL1 1385 aa16.93■□□□□ 0.3
AP003900.1-202ENST00000616952 EHMT2Q96KQ7 1210 aa16.93■□□□□ 0.3
AP003900.1-202ENST00000616952 MST1RQ04912 1400 aa16.93■□□□□ 0.3
AP003900.1-202ENST00000616952 SPHKAPQ2M3C7 1700 aa16.92■□□□□ 0.3
AP003900.1-202ENST00000616952 DDX17Q92841 729 aaKnown RBP16.91■□□□□ 0.3
AP003900.1-202ENST00000616952 IDI1Q13907 227 aa16.9■□□□□ 0.3
AP003900.1-202ENST00000616952 MTUS2Q5JR59 1369 aa16.89■□□□□ 0.3
AP003900.1-202ENST00000616952 PITPNM1O00562 1244 aa16.89■□□□□ 0.29
AP003900.1-202ENST00000616952 RSPH4AQ5TD94 716 aa16.89■□□□□ 0.29
AP003900.1-202ENST00000616952 GJD4Q96KN9 370 aaPredicted RBP16.89■□□□□ 0.29
AP003900.1-202ENST00000616952 CEP350Q5VT06 3117 aa16.89■□□□□ 0.29
AP003900.1-202ENST00000616952 R3HDM1Q15032 1099 aaKnown RBP16.88■□□□□ 0.29
AP003900.1-202ENST00000616952 ARHGEF5Q12774 1597 aa16.88■□□□□ 0.29
AP003900.1-202ENST00000616952 ZFYVE9O95405 1425 aa16.87■□□□□ 0.29
AP003900.1-202ENST00000616952 ZNF784Q8NCA9 323 aaPredicted RBP16.87■□□□□ 0.29
AP003900.1-202ENST00000616952 C1QTNF8P60827 252 aa16.86■□□□□ 0.29
AP003900.1-202ENST00000616952 GLI3P10071 1580 aa16.85■□□□□ 0.29
AP003900.1-202ENST00000616952 BAG6P46379 1132 aa16.85■□□□□ 0.29
AP003900.1-202ENST00000616952 TBX22Q9Y458 520 aa16.85■□□□□ 0.29
AP003900.1-202ENST00000616952 TSPY4P0CV99 314 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms