RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 PER1O15534 1290 aaPredicted RBP14.71□□□□□ -0.05
SENP3-EIF4A1-201ENST00000614237 OSCARQ8IYS5 282 aa14.71□□□□□ -0.05
SENP3-EIF4A1-201ENST00000614237 SCAF11Q99590 1463 aaKnown RBP14.71□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 AFAP1Q8N556 730 aa14.71□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 MYBBP1AQ9BQG0 1328 aaKnown RBP14.71□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 ADGRB3O60242 1522 aa14.7□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 ZC3H13Q5T200 1668 aaKnown RBP14.7□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 PNISRQ8TF01 805 aaKnown RBP14.7□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 RNF123Q5XPI4 1314 aa14.69□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 SLC24A1O60721 1099 aa14.69□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 KDM2AQ9Y2K7 1162 aa14.68□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 PAK3O75914 559 aaPredicted RBP14.67□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 PIK3C2BO00750 1634 aa14.67□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 MYOM1P52179 1685 aa14.67□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 ZNF326Q5BKZ1 582 aaKnown RBP14.67□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 NBPF1Q3BBV0 1214 aa14.67□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 RTL5Q5HYW3 569 aaPredicted RBP14.67□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 NPC1L1Q9UHC9 1359 aa14.67□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 MROH2AA6NES4 1674 aa14.66□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 ABCA6Q8N139 1617 aa14.66□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 CD109Q6YHK3 1445 aa14.66□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.063e-10■■□□□ 11.7
SENP3-EIF4A1-201ENST00000614237 PPLO60437 1756 aa14.66□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 RICTORQ6R327 1708 aa14.66□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 DISP3Q9P2K9 1392 aa14.65□□□□□ -0.06
SENP3-EIF4A1-201ENST00000614237 SBNO2Q9Y2G9 1366 aa14.64□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 ARHGAP31Q2M1Z3 1444 aa14.63□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 SALL2Q9Y467 1007 aaPredicted RBP14.63□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 TMF1P82094 1093 aa14.63□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 KDM5AP29375 1690 aaKnown RBP14.63□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 CAMSAP1Q5T5Y3 1602 aa14.63□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 ABCC3O15438 1527 aa14.62□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 EIF3AQ14152 1382 aaKnown RBP14.62□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 DIP2CQ9Y2E4 1556 aa14.62□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 BLMP54132 1417 aaPredicted RBP14.62□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 NLRP13Q86W25 1043 aa14.61□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 LAS1LQ9Y4W2 734 aaKnown RBP14.61□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 CDCA8Q53HL2 280 aa14.61□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 REREQ9P2R6 1566 aa14.61□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 NOS1P29475 1434 aa14.6□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 NPM1P06748 294 aaKnown RBP eCLIP14.6□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 RGL3Q3MIN7 710 aa14.59□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 IL27Q8NEV9 243 aa14.59□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 EIF5BO60841 1220 aaKnown RBP14.59□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 NUDCQ9Y266 331 aa14.58□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 NOP58Q9Y2X3 529 aaKnown RBP14.58□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 RPGRIP1LQ68CZ1 1315 aa14.58□□□□□ -0.07
SENP3-EIF4A1-201ENST00000614237 KIF3BO15066 747 aa14.57□□□□□ -0.08
SENP3-EIF4A1-201ENST00000614237 NPATQ14207 1427 aa14.57□□□□□ -0.08
SENP3-EIF4A1-201ENST00000614237 PDE3BQ13370 1112 aa14.57□□□□□ -0.08
SENP3-EIF4A1-201ENST00000614237 USP32Q8NFA0 1604 aa14.56□□□□□ -0.08
SENP3-EIF4A1-201ENST00000614237 PIK3C2GO75747 1445 aa14.56□□□□□ -0.08
SENP3-EIF4A1-201ENST00000614237 SIGLEC1Q9BZZ2 1709 aa14.56□□□□□ -0.08
SENP3-EIF4A1-201ENST00000614237 PPP4R2Q9NY27 417 aa14.56□□□□□ -0.08
SENP3-EIF4A1-201ENST00000614237 ADGRB1O14514 1584 aa14.56□□□□□ -0.08
SENP3-EIF4A1-201ENST00000614237 TMC1Q8TDI8 760 aa14.56□□□□□ -0.08
SENP3-EIF4A1-201ENST00000614237 ASXL1Q8IXJ9 1541 aa14.56□□□□□ -0.08
SENP3-EIF4A1-201ENST00000614237 ZFYVE9O95405 1425 aa14.55□□□□□ -0.08
SENP3-EIF4A1-201ENST00000614237 UGGT1Q9NYU2 1555 aa14.55□□□□□ -0.08
SENP3-EIF4A1-201ENST00000614237 ERVK-7P63135 1459 aa14.54□□□□□ -0.08
SENP3-EIF4A1-201ENST00000614237 PUS7Q96PZ0 661 aaKnown RBP14.53□□□□□ -0.08
SENP3-EIF4A1-201ENST00000614237 FANCIQ9NVI1 1328 aa14.53□□□□□ -0.08
SENP3-EIF4A1-201ENST00000614237 ANP32AP39687 249 aaKnown RBP14.52□□□□□ -0.09
SENP3-EIF4A1-201ENST00000614237 ZBTB47Q9UFB7 747 aaPredicted RBP14.52□□□□□ -0.09
SENP3-EIF4A1-201ENST00000614237 PANK3Q9H999 370 aa14.51□□□□□ -0.09
SENP3-EIF4A1-201ENST00000614237 NEXMIFQ5QGS0 1516 aa14.51□□□□□ -0.09
SENP3-EIF4A1-201ENST00000614237 AGLP35573 1532 aa14.5□□□□□ -0.09
SENP3-EIF4A1-201ENST00000614237 AMER1Q5JTC6 1135 aaPredicted RBP14.49□□□□□ -0.09
SENP3-EIF4A1-201ENST00000614237 QRICH2Q9H0J4 1663 aa14.49□□□□□ -0.09
SENP3-EIF4A1-201ENST00000614237 DIP2BQ9P265 1576 aa14.48□□□□□ -0.09
SENP3-EIF4A1-201ENST00000614237 PREX1Q8TCU6 1659 aa14.48□□□□□ -0.09
SENP3-EIF4A1-201ENST00000614237 C14orf93Q9H972 538 aaKnown RBP14.47□□□□□ -0.09
SENP3-EIF4A1-201ENST00000614237 ARHGEF28Q8N1W1 1705 aaKnown RBP14.47□□□□□ -0.09
SENP3-EIF4A1-201ENST00000614237 ADGRF5Q8IZF2 1346 aa14.46□□□□□ -0.09
SENP3-EIF4A1-201ENST00000614237 TMEM131LA2VDJ0 1609 aa14.45□□□□□ -0.1
SENP3-EIF4A1-201ENST00000614237 PPP6R1Q9UPN7 881 aa14.45□□□□□ -0.1
SENP3-EIF4A1-201ENST00000614237 RIMBP3CA6NJZ7 1639 aa14.45□□□□□ -0.1
SENP3-EIF4A1-201ENST00000614237 RIMBP3BA6NNM3 1639 aa14.45□□□□□ -0.1
SENP3-EIF4A1-201ENST00000614237 RIMBP3Q9UFD9 1639 aa14.45□□□□□ -0.1
SENP3-EIF4A1-201ENST00000614237 CLTCQ00610 1675 aaKnown RBP14.43□□□□□ -0.1
SENP3-EIF4A1-201ENST00000614237 NEFMP07197 916 aa14.41□□□□□ -0.1
SENP3-EIF4A1-201ENST00000614237 NGEFQ8N5V2 710 aa14.41□□□□□ -0.1
SENP3-EIF4A1-201ENST00000614237 KNSTRNQ9Y448 316 aa14.41□□□□□ -0.1
SENP3-EIF4A1-201ENST00000614237 PPP2R1AP30153 589 aa14.41□□□□□ -0.1
SENP3-EIF4A1-201ENST00000614237 SKAP1Q86WV1 359 aa14.41□□□□□ -0.1
SENP3-EIF4A1-201ENST00000614237 CFAP70Q5T0N1 1121 aa14.4□□□□□ -0.1
SENP3-EIF4A1-201ENST00000614237 ARXQ96QS3 562 aa14.4□□□□□ -0.1
SENP3-EIF4A1-201ENST00000614237 SLC52A1Q9NWF4 448 aa14.4□□□□□ -0.1
SENP3-EIF4A1-201ENST00000614237 ZNF521Q96K83 1311 aa14.39□□□□□ -0.11
SENP3-EIF4A1-201ENST00000614237 NCBP3Q53F19 620 aaKnown RBP14.38□□□□□ -0.11
SENP3-EIF4A1-201ENST00000614237 CYB5RLQ6IPT4 315 aa14.38□□□□□ -0.11
SENP3-EIF4A1-201ENST00000614237 SLC4A3P48751 1232 aa14.38□□□□□ -0.11
SENP3-EIF4A1-201ENST00000614237 NINLQ9Y2I6 1382 aa14.38□□□□□ -0.11
SENP3-EIF4A1-201ENST00000614237 POLR3AO14802 1390 aaPredicted RBP14.37□□□□□ -0.11
SENP3-EIF4A1-201ENST00000614237 CENPJQ9HC77 1338 aaPredicted RBP14.37□□□□□ -0.11
SENP3-EIF4A1-201ENST00000614237 SPATA31D1Q6ZQQ2 1576 aa14.37□□□□□ -0.11
SENP3-EIF4A1-201ENST00000614237 SHPRHQ149N8 1683 aa14.37□□□□□ -0.11
SENP3-EIF4A1-201ENST00000614237 YEATS2Q9ULM3 1422 aa14.36□□□□□ -0.11
SENP3-EIF4A1-201ENST00000614237 MYO5BQ9ULV0 1848 aa14.36□□□□□ -0.11
SENP3-EIF4A1-201ENST00000614237 VGFO15240 615 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms