RNA–Protein interactions for RNA: ENST00000591956.1

SNHG16-208, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 2

Gene SNHG16, Length 556 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-208ENST00000591956 NPHP4O75161 1426 aaPredicted RBP16.83■□□□□ 0.28
SNHG16-208ENST00000591956 ILDR2Q71H61 639 aa16.83■□□□□ 0.28
SNHG16-208ENST00000591956 NEURL4Q96JN8 1562 aa16.83■□□□□ 0.28
SNHG16-208ENST00000591956 ZFYVE9O95405 1425 aa16.81■□□□□ 0.28
SNHG16-208ENST00000591956 RPGRIP1LQ68CZ1 1315 aa16.81■□□□□ 0.28
SNHG16-208ENST00000591956 CHGAP10645 457 aaKnown RBP16.78■□□□□ 0.28
SNHG16-208ENST00000591956 IQGAP1P46940 1657 aa16.78■□□□□ 0.28
SNHG16-208ENST00000591956 RIMS2Q9UQ26 1411 aa16.78■□□□□ 0.28
SNHG16-208ENST00000591956 KIF1BO60333 1816 aa16.77■□□□□ 0.28
SNHG16-208ENST00000591956 MYO5BQ9ULV0 1848 aa16.77■□□□□ 0.27
SNHG16-208ENST00000591956 PLEKHG1Q9ULL1 1385 aa16.77■□□□□ 0.27
SNHG16-208ENST00000591956 SCAF1Q9H7N4 1312 aaKnown RBP16.76■□□□□ 0.27
SNHG16-208ENST00000591956 FOXD1Q16676 465 aa16.76■□□□□ 0.27
SNHG16-208ENST00000591956 TBX22Q9Y458 520 aa16.76■□□□□ 0.27
SNHG16-208ENST00000591956 CLTCL1P53675 1640 aa16.76■□□□□ 0.27
SNHG16-208ENST00000591956 CCDC144AA2RUR9 1427 aa16.76■□□□□ 0.27
SNHG16-208ENST00000591956 VGFO15240 615 aaPredicted RBP16.75■□□□□ 0.27
SNHG16-208ENST00000591956 ANKRD30BQ9BXX2 1392 aa16.75■□□□□ 0.27
SNHG16-208ENST00000591956 PIP4K2BP78356 416 aa16.74■□□□□ 0.27
SNHG16-208ENST00000591956 PPP1R15AO75807 674 aaPredicted RBP16.73■□□□□ 0.27
SNHG16-208ENST00000591956 CPS1P31327 1500 aa16.72■□□□□ 0.27
SNHG16-208ENST00000591956 TOM1O60784 492 aa16.72■□□□□ 0.27
SNHG16-208ENST00000591956 ZNF326Q5BKZ1 582 aaKnown RBP16.72■□□□□ 0.27
SNHG16-208ENST00000591956 STAC3Q96MF2 364 aa16.72■□□□□ 0.27
SNHG16-208ENST00000591956 SPATA31E1Q6ZUB1 1445 aa16.7■□□□□ 0.26
SNHG16-208ENST00000591956 PIK3R4Q99570 1358 aa16.7■□□□□ 0.26
SNHG16-208ENST00000591956 SOCS7O14512 581 aa16.7■□□□□ 0.26
SNHG16-208ENST00000591956 KCNA6P17658 529 aa16.7■□□□□ 0.26
SNHG16-208ENST00000591956 HSPA1LP34931 641 aa16.68■□□□□ 0.26
SNHG16-208ENST00000591956 STRCP1A6NGW2 1772 aa16.67■□□□□ 0.26
SNHG16-208ENST00000591956 NEXMIFQ5QGS0 1516 aa16.67■□□□□ 0.26
SNHG16-208ENST00000591956 BCANQ96GW7 911 aa16.67■□□□□ 0.26
SNHG16-208ENST00000591956 SLC26A8Q96RN1 970 aa16.67■□□□□ 0.26
SNHG16-208ENST00000591956 DIP2AQ14689 1571 aa16.66■□□□□ 0.26
SNHG16-208ENST00000591956 ADAMTS13Q76LX8 1427 aa16.65■□□□□ 0.26
SNHG16-208ENST00000591956 SETBP1Q9Y6X0 1596 aa16.64■□□□□ 0.25
SNHG16-208ENST00000591956 CHD2O14647 1828 aaKnown RBP16.63■□□□□ 0.25
SNHG16-208ENST00000591956 PPLO60437 1756 aa16.62■□□□□ 0.25
SNHG16-208ENST00000591956 RGL3Q3MIN7 710 aa16.62■□□□□ 0.25
SNHG16-208ENST00000591956 NUTM2DQ5VT03 806 aaPredicted RBP16.62■□□□□ 0.25
SNHG16-208ENST00000591956 SENP3Q9H4L4 574 aaPredicted RBP16.62■□□□□ 0.25
SNHG16-208ENST00000591956 NCOA3Q9Y6Q9 1424 aa16.62■□□□□ 0.25
SNHG16-208ENST00000591956 LRRC7Q96NW7 1537 aa16.6■□□□□ 0.25
SNHG16-208ENST00000591956 ALKQ9UM73 1620 aa16.6■□□□□ 0.25
SNHG16-208ENST00000591956 NKTRP30414 1462 aaKnown RBP16.59■□□□□ 0.25
SNHG16-208ENST00000591956 NRXN3Q9Y4C0 1643 aa16.59■□□□□ 0.25
SNHG16-208ENST00000591956 NWD1Q149M9 1564 aa16.58■□□□□ 0.24
SNHG16-208ENST00000591956 IFT172Q9UG01 1749 aa16.57■□□□□ 0.24
SNHG16-208ENST00000591956 AMOTL2Q9Y2J4 779 aa16.57■□□□□ 0.24
SNHG16-208ENST00000591956 NRXN1Q9ULB1 1477 aa16.56■□□□□ 0.24
SNHG16-208ENST00000591956 DHX57Q6P158 1386 aaKnown RBP16.56■□□□□ 0.24
SNHG16-208ENST00000591956 ADGRF5Q8IZF2 1346 aa16.56■□□□□ 0.24
SNHG16-208ENST00000591956 PROSER2Q86WR7 435 aaPredicted RBP16.56■□□□□ 0.24
SNHG16-208ENST00000591956 MED1Q15648 1581 aaPredicted RBP16.55■□□□□ 0.24
SNHG16-208ENST00000591956 MYOM2P54296 1465 aa16.55■□□□□ 0.24
SNHG16-208ENST00000591956 C14orf93Q9H972 538 aaKnown RBP16.55■□□□□ 0.24
SNHG16-208ENST00000591956 METP08581 1390 aa16.54■□□□□ 0.24
SNHG16-208ENST00000591956 XIRP1Q702N8 1843 aaKnown RBP16.54■□□□□ 0.24
SNHG16-208ENST00000591956 PIK3C2GO75747 1445 aa16.53■□□□□ 0.24
SNHG16-208ENST00000591956 PRAG1Q86YV5 1406 aa16.53■□□□□ 0.24
SNHG16-208ENST00000591956 DCAF11Q8TEB1 546 aa16.52■□□□□ 0.24
SNHG16-208ENST00000591956 SIRT1Q96EB6 747 aa16.52■□□□□ 0.24
SNHG16-208ENST00000591956 PTPRUQ92729 1446 aa16.52■□□□□ 0.23
SNHG16-208ENST00000591956 TMEM94Q12767 1356 aa16.51■□□□□ 0.23
SNHG16-208ENST00000591956 C19orf44Q9H6X5 657 aa16.51■□□□□ 0.23
SNHG16-208ENST00000591956 SETD1AO15047 1707 aaKnown RBP16.5■□□□□ 0.23
SNHG16-208ENST00000591956 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
SNHG16-208ENST00000591956 ABCC11Q96J66 1382 aa16.49■□□□□ 0.23
SNHG16-208ENST00000591956 XRN1Q8IZH2 1706 aaKnown RBP16.48■□□□□ 0.23
SNHG16-208ENST00000591956 RBM33Q96EV2 1170 aaKnown RBP16.48■□□□□ 0.23
SNHG16-208ENST00000591956 PCGF6Q9BYE7 350 aa16.48■□□□□ 0.23
SNHG16-208ENST00000591956 CLSPNQ9HAW4 1339 aa16.47■□□□□ 0.23
SNHG16-208ENST00000591956 TECPR2O15040 1411 aa16.46■□□□□ 0.23
SNHG16-208ENST00000591956 PTCH1Q13635 1447 aa16.46■□□□□ 0.23
SNHG16-208ENST00000591956 LAMC1P11047 1609 aa16.46■□□□□ 0.23
SNHG16-208ENST00000591956 MSH6P52701 1360 aa16.46■□□□□ 0.23
SNHG16-208ENST00000591956 CFAP70Q5T0N1 1121 aa16.45■□□□□ 0.22
SNHG16-208ENST00000591956 CADPS2Q86UW7 1296 aa16.45■□□□□ 0.22
SNHG16-208ENST00000591956 KDM2AQ9Y2K7 1162 aa16.45■□□□□ 0.22
SNHG16-208ENST00000591956 LRPPRCP42704 1394 aaKnown RBP16.45■□□□□ 0.22
SNHG16-208ENST00000591956 SIN3AQ96ST3 1273 aa16.44■□□□□ 0.22
SNHG16-208ENST00000591956 L3MBTL2Q969R5 705 aa16.43■□□□□ 0.22
SNHG16-208ENST00000591956 SLAIN2Q9P270 581 aa16.43■□□□□ 0.22
SNHG16-208ENST00000591956 DCCP43146 1447 aa16.43■□□□□ 0.22
SNHG16-208ENST00000591956 TIMELESSQ9UNS1 1208 aa16.42■□□□□ 0.22
SNHG16-208ENST00000591956 FAM135BQ49AJ0 1406 aa16.42■□□□□ 0.22
SNHG16-208ENST00000591956 TMEM132EQ6IEE7 984 aa16.41■□□□□ 0.22
SNHG16-208ENST00000591956 YTHDC2Q9H6S0 1430 aaKnown RBP16.41■□□□□ 0.22
SNHG16-208ENST00000591956 ROBO2Q9HCK4 1378 aa16.4■□□□□ 0.22
SNHG16-208ENST00000591956 ATF3P18847 181 aa16.4■□□□□ 0.22
SNHG16-208ENST00000591956 NEUROD1Q13562 356 aa16.4■□□□□ 0.22
SNHG16-208ENST00000591956 C14orf37Q86TY3 774 aa16.39■□□□□ 0.21
SNHG16-208ENST00000591956 KIAA1210Q9ULL0 1709 aa16.39■□□□□ 0.21
SNHG16-208ENST00000591956 KNDC1Q76NI1 1749 aa16.38■□□□□ 0.21
SNHG16-208ENST00000591956 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.38■□□□□ 0.21
SNHG16-208ENST00000591956 ADGRB1O14514 1584 aa16.38■□□□□ 0.21
SNHG16-208ENST00000591956 ADGRL3Q9HAR2 1447 aa16.37■□□□□ 0.21
SNHG16-208ENST00000591956 DLC1Q96QB1 1528 aa16.37■□□□□ 0.21
SNHG16-208ENST00000591956 ROBO1Q9Y6N7 1651 aa16.37■□□□□ 0.21
SNHG16-208ENST00000591956 ASXL1Q8IXJ9 1541 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms