RNA–Protein interactions for RNA: ENST00000591956.1

SNHG16-208, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 2

Gene SNHG16, Length 556 nt, Biotype lincRNA, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-208ENST00000591956 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.77□□□□□ -0.691e-79■■■■□ 24.1
SNHG16-208ENST00000591956 NOLC1Q14978 699 aaKnown RBP eCLIP12.44□□□□□ -0.423e-75■■■■■ 172.5
SNHG16-208ENST00000591956 RPS3P23396 243 aaKnown RBP eCLIP11.17□□□□□ -0.622e-40■□□□□ 9.8
SNHG16-208ENST00000591956 TROVE2P10155 538 aaKnown RBP eCLIP10.38□□□□□ -0.755e-39■□□□□ 9.8
SNHG16-208ENST00000591956 ZRANB2O95218 330 aaKnown RBP eCLIP11.57□□□□□ -0.562e-33■■■■■ 94.1
SNHG16-208ENST00000591956 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.02□□□□□ -0.657e-31■■■■■ 27.6
SNHG16-208ENST00000591956 DDX3XO00571 662 aaKnown RBP eCLIP11.8□□□□□ -0.522e-29■■■■□ 19.4
SNHG16-208ENST00000591956 TRA2AQ13595 282 aaKnown RBP eCLIP11.16□□□□□ -0.623e-28■■□□□ 13
SNHG16-208ENST00000591956 WDR43Q15061 677 aaKnown RBP eCLIP15.07■□□□□ 05e-28■□□□□ 9.6
SNHG16-208ENST00000591956 PABPC4Q13310 644 aaKnown RBP eCLIP13.57□□□□□ -0.241e-25■■■□□ 17
SNHG16-208ENST00000591956 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.76□□□□□ -0.532e-24■□□□□ 8.3
SNHG16-208ENST00000591956 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.63□□□□□ -0.714e-21■■■■□ 21.8
SNHG16-208ENST00000591956 AATFQ9NY61 560 aaKnown RBP eCLIP13.77□□□□□ -0.213e-20■■■■■ 65.4
SNHG16-208ENST00000591956 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.67□□□□□ -0.389e-20■■■■■ 27.5
SNHG16-208ENST00000591956 PTBP1P26599 531 aaKnown RBP eCLIP8.98□□□□□ -0.972e-16■■□□□ 12.2
SNHG16-208ENST00000591956 SMNDC1O75940 238 aaKnown RBP eCLIP10.1□□□□□ -0.793e-16■■■■□ 19.6
SNHG16-208ENST00000591956 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.8□□□□□ -0.527e-15■□□□□ 9.5
SNHG16-208ENST00000591956 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.03□□□□□ -0.487e-15■■■■■ 32.6
SNHG16-208ENST00000591956 DKC1O60832 514 aaKnown RBP eCLIP12.84□□□□□ -0.352e-13■■■■■ 46.9
SNHG16-208ENST00000591956 U2AF2P26368 475 aaKnown RBP eCLIP12.9□□□□□ -0.344e-13■■■□□ 18.2
SNHG16-208ENST00000591956 XRCC6P12956 609 aaKnown RBP eCLIP12.81□□□□□ -0.364e-12■■■■■ 34.4
SNHG16-208ENST00000591956 NIP7Q9Y221 180 aaKnown RBP eCLIP14.65□□□□□ -0.061e-11■■■■■ 42.1
SNHG16-208ENST00000591956 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.735e-10■■■■□ 19.4
SNHG16-208ENST00000591956 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.53■□□□□ 0.41e-8■■■□□ 15.3
SNHG16-208ENST00000591956 SF3B4Q15427 424 aaKnown RBP eCLIP10.39□□□□□ -0.752e-8■■■■□ 21.4
SNHG16-208ENST00000591956 SUB1P53999 127 aaKnown RBP eCLIP8.74□□□□□ -1.012e-8■■■■■ 29.1
SNHG16-208ENST00000591956 NIPBLQ6KC79 2804 aaeCLIP9.75□□□□□ -0.854e-8■■■■■ 52.7
SNHG16-208ENST00000591956 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.2□□□□□ -0.624e-8■■■□□ 18
SNHG16-208ENST00000591956 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.14□□□□□ -0.475e-8■■■□□ 17.8
SNHG16-208ENST00000591956 SF3A3Q12874 501 aaKnown RBP eCLIP10.2□□□□□ -0.785e-8■■■■□ 19.8
SNHG16-208ENST00000591956 WRNQ14191 1432 aaPredicted RBP eCLIP19.76■□□□□ 0.756e-8■■□□□ 11.5
SNHG16-208ENST00000591956 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.3□□□□□ -0.67e-8■■■■□ 21.5
SNHG16-208ENST00000591956 SSBP05455 408 aaKnown RBP eCLIP12.54□□□□□ -0.41e-7■■□□□ 13.3
SNHG16-208ENST00000591956 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.63□□□□□ -0.393e-7■■■■□ 25.2
SNHG16-208ENST00000591956 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.6□□□□□ -0.874e-7■■■■□ 25
SNHG16-208ENST00000591956 EFTUD2Q15029 972 aaKnown RBP eCLIP10.88□□□□□ -0.675e-7■□□□□ 10.4
SNHG16-208ENST00000591956 AARSP49588 968 aaKnown RBP eCLIP12.34□□□□□ -0.436e-7■□□□□ 9.5
SNHG16-208ENST00000591956 ILF3Q12906 894 aaKnown RBP eCLIP11.27□□□□□ -0.617e-7■■□□□ 11.9
SNHG16-208ENST00000591956 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.35□□□□□ -0.598e-7■■■■■ 34.4
SNHG16-208ENST00000591956 GPKOWQ92917 476 aaPredicted RBP eCLIP13.04□□□□□ -0.321e-6■■■■□ 25
SNHG16-208ENST00000591956 PCBP1Q15365 356 aaKnown RBP eCLIP12.72□□□□□ -0.372e-6■■■□□ 15.6
SNHG16-208ENST00000591956 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.77□□□□□ -0.372e-6■□□□□ 10.4
SNHG16-208ENST00000591956 U2AF1Q01081 240 aaKnown RBP eCLIP15.19■□□□□ 0.022e-6■□□□□ 9.2
SNHG16-208ENST00000591956 RBM22Q9NW64 420 aaKnown RBP eCLIP11.5□□□□□ -0.577e-6■■■■□ 24.6
Retrieved 44 of 44 RNA–protein pairs in 12.9 ms