RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 TMEM131LA2VDJ0 1609 aa28.47■■■□□ 2.15
CIRBP-220ENST00000588917 RPGRIP1LQ68CZ1 1315 aa28.46■■■□□ 2.15
CIRBP-220ENST00000588917 ILDR2Q71H61 639 aa28.46■■■□□ 2.15
CIRBP-220ENST00000588917 TXNDC2Q86VQ3 553 aa28.46■■■□□ 2.15
CIRBP-220ENST00000588917 NEURL4Q96JN8 1562 aa28.45■■■□□ 2.14
CIRBP-220ENST00000588917 KIF1BO60333 1816 aa28.44■■■□□ 2.14
CIRBP-220ENST00000588917 SLIT1O75093 1534 aa28.43■■■□□ 2.14
CIRBP-220ENST00000588917 ARHGAP23Q9P227 1491 aa28.42■■■□□ 2.14
CIRBP-220ENST00000588917 RGL3Q3MIN7 710 aa28.42■■■□□ 2.14
CIRBP-220ENST00000588917 CLSPNQ9HAW4 1339 aa28.42■■■□□ 2.14
CIRBP-220ENST00000588917 POLR1AO95602 1720 aaPredicted RBP28.41■■■□□ 2.14
CIRBP-220ENST00000588917 CPS1P31327 1500 aa28.39■■■□□ 2.14
CIRBP-220ENST00000588917 VGFO15240 615 aaPredicted RBP28.39■■■□□ 2.14
CIRBP-220ENST00000588917 NPHP4O75161 1426 aaPredicted RBP28.39■■■□□ 2.14
CIRBP-220ENST00000588917 PPP1R15AO75807 674 aaPredicted RBP28.39■■■□□ 2.14
CIRBP-220ENST00000588917 CCER1Q8TC90 406 aaPredicted RBP28.39■■■□□ 2.14
CIRBP-220ENST00000588917 RIMS2Q9UQ26 1411 aa28.39■■■□□ 2.14
CIRBP-220ENST00000588917 MED14O60244 1454 aa28.39■■■□□ 2.13
CIRBP-220ENST00000588917 SPATA31E1Q6ZUB1 1445 aa28.38■■■□□ 2.13
CIRBP-220ENST00000588917 LTKP29376 864 aa28.38■■■□□ 2.13
CIRBP-220ENST00000588917 TOM1O60784 492 aa28.37■■■□□ 2.13
CIRBP-220ENST00000588917 STAC3Q96MF2 364 aa28.37■■■□□ 2.13
CIRBP-220ENST00000588917 SCAF11Q99590 1463 aaKnown RBP28.35■■■□□ 2.13
CIRBP-220ENST00000588917 NEUROD1Q13562 356 aa28.35■■■□□ 2.13
CIRBP-220ENST00000588917 SIN3AQ96ST3 1273 aa28.35■■■□□ 2.13
CIRBP-220ENST00000588917 ZFYVE9O95405 1425 aa28.35■■■□□ 2.13
CIRBP-220ENST00000588917 SOCS7O14512 581 aa28.34■■■□□ 2.13
CIRBP-220ENST00000588917 SCAF1Q9H7N4 1312 aaKnown RBP28.32■■■□□ 2.12
CIRBP-220ENST00000588917 PIP4K2BP78356 416 aa28.31■■■□□ 2.12
CIRBP-220ENST00000588917 BCANQ96GW7 911 aa28.31■■■□□ 2.12
CIRBP-220ENST00000588917 MYO5BQ9ULV0 1848 aa28.31■■■□□ 2.12
CIRBP-220ENST00000588917 NUTM2DQ5VT03 806 aaPredicted RBP28.28■■■□□ 2.12
CIRBP-220ENST00000588917 PLEKHG1Q9ULL1 1385 aa28.27■■■□□ 2.12
CIRBP-220ENST00000588917 HSPA1LP34931 641 aa28.26■■■□□ 2.11
CIRBP-220ENST00000588917 DCAF11Q8TEB1 546 aa28.26■■■□□ 2.11
CIRBP-220ENST00000588917 NEXMIFQ5QGS0 1516 aa28.26■■■□□ 2.11
CIRBP-220ENST00000588917 IQGAP1P46940 1657 aa28.24■■■□□ 2.11
CIRBP-220ENST00000588917 TIMELESSQ9UNS1 1208 aa28.21■■■□□ 2.11
CIRBP-220ENST00000588917 KDM2AQ9Y2K7 1162 aa28.2■■■□□ 2.1
CIRBP-220ENST00000588917 TBX22Q9Y458 520 aa28.2■■■□□ 2.1
CIRBP-220ENST00000588917 L3MBTL2Q969R5 705 aa28.19■■■□□ 2.1
CIRBP-220ENST00000588917 TONSLQ96HA7 1378 aa28.19■■■□□ 2.1
CIRBP-220ENST00000588917 PPLO60437 1756 aa28.17■■■□□ 2.1
CIRBP-220ENST00000588917 SLC26A8Q96RN1 970 aa28.17■■■□□ 2.1
CIRBP-220ENST00000588917 ADGRF5Q8IZF2 1346 aa28.17■■■□□ 2.1
CIRBP-220ENST00000588917 MYOM2P54296 1465 aa28.15■■■□□ 2.1
CIRBP-220ENST00000588917 LRRC7Q96NW7 1537 aa28.15■■■□□ 2.1
CIRBP-220ENST00000588917 SENP3Q9H4L4 574 aaPredicted RBP28.12■■■□□ 2.09
CIRBP-220ENST00000588917 IFT172Q9UG01 1749 aa28.12■■■□□ 2.09
CIRBP-220ENST00000588917 SETBP1Q9Y6X0 1596 aa28.11■■■□□ 2.09
CIRBP-220ENST00000588917 ALKQ9UM73 1620 aa28.09■■■□□ 2.09
CIRBP-220ENST00000588917 PIK3R4Q99570 1358 aa28.09■■■□□ 2.09
CIRBP-220ENST00000588917 STRCP1A6NGW2 1772 aa28.09■■■□□ 2.09
CIRBP-220ENST00000588917 ADAMTS13Q76LX8 1427 aa28.09■■■□□ 2.09
CIRBP-220ENST00000588917 NRXN1Q9ULB1 1477 aa28.08■■■□□ 2.09
CIRBP-220ENST00000588917 C14orf93Q9H972 538 aaKnown RBP28.08■■■□□ 2.09
CIRBP-220ENST00000588917 PIK3C2GO75747 1445 aa28.08■■■□□ 2.09
CIRBP-220ENST00000588917 DIP2AQ14689 1571 aa28.07■■■□□ 2.08
CIRBP-220ENST00000588917 KCNA6P17658 529 aa28.05■■■□□ 2.08
CIRBP-220ENST00000588917 CFAP70Q5T0N1 1121 aa28.02■■■□□ 2.08
CIRBP-220ENST00000588917 MED1Q15648 1581 aaPredicted RBP28.01■■■□□ 2.07
CIRBP-220ENST00000588917 NRXN3Q9Y4C0 1643 aa28■■■□□ 2.07
CIRBP-220ENST00000588917 PRAG1Q86YV5 1406 aa27.99■■■□□ 2.07
CIRBP-220ENST00000588917 AMOTL2Q9Y2J4 779 aa27.98■■■□□ 2.07
CIRBP-220ENST00000588917 METP08581 1390 aa27.98■■■□□ 2.07
CIRBP-220ENST00000588917 LAMC1P11047 1609 aa27.95■■■□□ 2.06
CIRBP-220ENST00000588917 TMEM132EQ6IEE7 984 aa27.93■■■□□ 2.06
CIRBP-220ENST00000588917 PHF23Q9BUL5 403 aaPredicted RBP27.93■■■□□ 2.06
CIRBP-220ENST00000588917 TMEM94Q12767 1356 aa27.9■■■□□ 2.06
CIRBP-220ENST00000588917 PROSER2Q86WR7 435 aaPredicted RBP27.9■■■□□ 2.06
CIRBP-220ENST00000588917 NBPF8Q3BBV2 869 aa27.89■■■□□ 2.06
CIRBP-220ENST00000588917 LRPPRCP42704 1394 aaKnown RBP27.88■■■□□ 2.05
CIRBP-220ENST00000588917 ABCC11Q96J66 1382 aa27.88■■■□□ 2.05
CIRBP-220ENST00000588917 CHD2O14647 1828 aaKnown RBP27.88■■■□□ 2.05
CIRBP-220ENST00000588917 PTPRUQ92729 1446 aa27.88■■■□□ 2.05
CIRBP-220ENST00000588917 SIRT1Q96EB6 747 aa27.88■■■□□ 2.05
CIRBP-220ENST00000588917 KIAA1210Q9ULL0 1709 aa27.87■■■□□ 2.05
CIRBP-220ENST00000588917 STK26Q9P289 416 aa27.87■■■□□ 2.05
CIRBP-220ENST00000588917 SETD1AO15047 1707 aaKnown RBP27.87■■■□□ 2.05
CIRBP-220ENST00000588917 YTHDC2Q9H6S0 1430 aaKnown RBP27.86■■■□□ 2.05
CIRBP-220ENST00000588917 NKTRP30414 1462 aaKnown RBP27.86■■■□□ 2.05
CIRBP-220ENST00000588917 NWD1Q149M9 1564 aa27.86■■■□□ 2.05
CIRBP-220ENST00000588917 FAM135BQ49AJ0 1406 aa27.85■■■□□ 2.05
CIRBP-220ENST00000588917 NBPF1Q3BBV0 1214 aa27.85■■■□□ 2.05
CIRBP-220ENST00000588917 XIRP1Q702N8 1843 aaKnown RBP27.84■■■□□ 2.05
CIRBP-220ENST00000588917 RBM33Q96EV2 1170 aaKnown RBP27.82■■■□□ 2.04
CIRBP-220ENST00000588917 ROCK2O75116 1388 aaKnown RBP27.82■■■□□ 2.04
CIRBP-220ENST00000588917 NCOA3Q9Y6Q9 1424 aa27.81■■■□□ 2.04
CIRBP-220ENST00000588917 ADGRB1O14514 1584 aa27.81■■■□□ 2.04
CIRBP-220ENST00000588917 TRAK1Q9UPV9 953 aa27.8■■■□□ 2.04
CIRBP-220ENST00000588917 TECPR2O15040 1411 aa27.8■■■□□ 2.04
CIRBP-220ENST00000588917 ASXL1Q8IXJ9 1541 aa27.78■■■□□ 2.04
CIRBP-220ENST00000588917 PTCH1Q13635 1447 aa27.78■■■□□ 2.04
CIRBP-220ENST00000588917 XRN1Q8IZH2 1706 aaKnown RBP27.78■■■□□ 2.04
CIRBP-220ENST00000588917 CARD11Q9BXL7 1154 aa27.77■■■□□ 2.04
CIRBP-220ENST00000588917 TRPM1Q7Z4N2 1603 aa27.77■■■□□ 2.04
CIRBP-220ENST00000588917 C14orf37Q86TY3 774 aa27.76■■■□□ 2.03
CIRBP-220ENST00000588917 POGKQ9P215 609 aa27.76■■■□□ 2.03
CIRBP-220ENST00000588917 RALGAPBQ86X10 1494 aa27.76■■■□□ 2.03
CIRBP-220ENST00000588917 GPRASP1Q5JY77 1395 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms