RNA–Protein interactions for RNA: ENST00000576221.1

PCTP-208, Transcript of phosphatidylcholine transfer protein, humanhuman

TSL 5

Gene PCTP, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-208ENST00000576221 RPGRIP1LQ68CZ1 1315 aa11.45□□□□□ -0.58
PCTP-208ENST00000576221 VGFO15240 615 aaPredicted RBP11.45□□□□□ -0.58
PCTP-208ENST00000576221 SIN3AQ96ST3 1273 aa11.45□□□□□ -0.58
PCTP-208ENST00000576221 RIMS2Q9UQ26 1411 aa11.44□□□□□ -0.58
PCTP-208ENST00000576221 SPHKAPQ2M3C7 1700 aa11.44□□□□□ -0.58
PCTP-208ENST00000576221 ZNF335Q9H4Z2 1342 aaPredicted RBP11.44□□□□□ -0.58
PCTP-208ENST00000576221 LTKP29376 864 aa11.44□□□□□ -0.58
PCTP-208ENST00000576221 PIK3C2BO00750 1634 aa11.44□□□□□ -0.58
PCTP-208ENST00000576221 ADGRB3O60242 1522 aa11.44□□□□□ -0.58
PCTP-208ENST00000576221 KDM2AQ9Y2K7 1162 aa11.43□□□□□ -0.58
PCTP-208ENST00000576221 DCAF11Q8TEB1 546 aa11.42□□□□□ -0.58
PCTP-208ENST00000576221 SCAF11Q99590 1463 aaKnown RBP11.42□□□□□ -0.58
PCTP-208ENST00000576221 CLTCL1P53675 1640 aa11.42□□□□□ -0.58
PCTP-208ENST00000576221 LTBP4Q8N2S1 1624 aa11.42□□□□□ -0.58
PCTP-208ENST00000576221 NEURL4Q96JN8 1562 aa11.41□□□□□ -0.58
PCTP-208ENST00000576221 NPHP4O75161 1426 aaPredicted RBP11.41□□□□□ -0.58
PCTP-208ENST00000576221 UBR1Q8IWV7 1749 aa11.4□□□□□ -0.58
PCTP-208ENST00000576221 CLSPNQ9HAW4 1339 aa11.4□□□□□ -0.58
PCTP-208ENST00000576221 ARHGAP23Q9P227 1491 aa11.4□□□□□ -0.58
PCTP-208ENST00000576221 STAC3Q96MF2 364 aa11.4□□□□□ -0.58
PCTP-208ENST00000576221 SLC26A8Q96RN1 970 aa11.4□□□□□ -0.58
PCTP-208ENST00000576221 SLIT1O75093 1534 aa11.4□□□□□ -0.59
PCTP-208ENST00000576221 TMEM131LA2VDJ0 1609 aa11.39□□□□□ -0.59
PCTP-208ENST00000576221 SPATA31E1Q6ZUB1 1445 aa11.39□□□□□ -0.59
PCTP-208ENST00000576221 POLR1AO95602 1720 aaPredicted RBP11.38□□□□□ -0.59
PCTP-208ENST00000576221 TONSLQ96HA7 1378 aa11.38□□□□□ -0.59
PCTP-208ENST00000576221 PLEKHG1Q9ULL1 1385 aa11.38□□□□□ -0.59
PCTP-208ENST00000576221 MED14O60244 1454 aa11.38□□□□□ -0.59
PCTP-208ENST00000576221 ADGRF5Q8IZF2 1346 aa11.37□□□□□ -0.59
PCTP-208ENST00000576221 ZFYVE9O95405 1425 aa11.37□□□□□ -0.59
PCTP-208ENST00000576221 TBX22Q9Y458 520 aa11.37□□□□□ -0.59
PCTP-208ENST00000576221 KDM5AP29375 1690 aaKnown RBP11.36□□□□□ -0.59
PCTP-208ENST00000576221 L3MBTL2Q969R5 705 aa11.36□□□□□ -0.59
PCTP-208ENST00000576221 KIF1BO60333 1816 aa11.35□□□□□ -0.59
PCTP-208ENST00000576221 IQGAP1P46940 1657 aa11.33□□□□□ -0.6
PCTP-208ENST00000576221 NEXMIFQ5QGS0 1516 aa11.33□□□□□ -0.6
PCTP-208ENST00000576221 MYO5BQ9ULV0 1848 aa11.32□□□□□ -0.6
PCTP-208ENST00000576221 KCNA6P17658 529 aa11.32□□□□□ -0.6
PCTP-208ENST00000576221 CFAP70Q5T0N1 1121 aa11.32□□□□□ -0.6
PCTP-208ENST00000576221 TIMELESSQ9UNS1 1208 aa11.32□□□□□ -0.6
PCTP-208ENST00000576221 C14orf93Q9H972 538 aaKnown RBP11.31□□□□□ -0.6
PCTP-208ENST00000576221 AMOTL2Q9Y2J4 779 aa11.31□□□□□ -0.6
PCTP-208ENST00000576221 STRCP1A6NGW2 1772 aa11.31□□□□□ -0.6
PCTP-208ENST00000576221 TMEM132EQ6IEE7 984 aa11.3□□□□□ -0.6
PCTP-208ENST00000576221 PROSER2Q86WR7 435 aaPredicted RBP11.3□□□□□ -0.6
PCTP-208ENST00000576221 STK26Q9P289 416 aa11.3□□□□□ -0.6
PCTP-208ENST00000576221 ADAMTS13Q76LX8 1427 aa11.29□□□□□ -0.6
PCTP-208ENST00000576221 UBAP1LF5GYI3 381 aa11.29□□□□□ -0.6
PCTP-208ENST00000576221 MYOM2P54296 1465 aa11.29□□□□□ -0.6
PCTP-208ENST00000576221 IQSEC2Q5JU85 1478 aa11.29□□□□□ -0.6
PCTP-208ENST00000576221 METP08581 1390 aa11.28□□□□□ -0.6
PCTP-208ENST00000576221 PIK3R4Q99570 1358 aa11.28□□□□□ -0.6
PCTP-208ENST00000576221 C14orf37Q86TY3 774 aa11.28□□□□□ -0.6
PCTP-208ENST00000576221 CPS1P31327 1500 aa11.28□□□□□ -0.6
PCTP-208ENST00000576221 PIK3C2GO75747 1445 aa11.27□□□□□ -0.6
PCTP-208ENST00000576221 SETBP1Q9Y6X0 1596 aa11.26□□□□□ -0.61
PCTP-208ENST00000576221 LRRC7Q96NW7 1537 aa11.25□□□□□ -0.61
PCTP-208ENST00000576221 RBM33Q96EV2 1170 aaKnown RBP11.25□□□□□ -0.61
PCTP-208ENST00000576221 TRAK1Q9UPV9 953 aa11.25□□□□□ -0.61
PCTP-208ENST00000576221 NRXN1Q9ULB1 1477 aa11.25□□□□□ -0.61
PCTP-208ENST00000576221 DIP2AQ14689 1571 aa11.24□□□□□ -0.61
PCTP-208ENST00000576221 ALKQ9UM73 1620 aa11.24□□□□□ -0.61
PCTP-208ENST00000576221 PPLO60437 1756 aa11.24□□□□□ -0.61
PCTP-208ENST00000576221 PIP4K2BP78356 416 aa11.24□□□□□ -0.61
PCTP-208ENST00000576221 NBPF1Q3BBV0 1214 aa11.24□□□□□ -0.61
PCTP-208ENST00000576221 NBPF8Q3BBV2 869 aa11.24□□□□□ -0.61
PCTP-208ENST00000576221 POGKQ9P215 609 aa11.24□□□□□ -0.61
PCTP-208ENST00000576221 PRAG1Q86YV5 1406 aa11.24□□□□□ -0.61
PCTP-208ENST00000576221 PHF23Q9BUL5 403 aaPredicted RBP11.23□□□□□ -0.61
PCTP-208ENST00000576221 SCAF1Q9H7N4 1312 aaKnown RBP11.23□□□□□ -0.61
PCTP-208ENST00000576221 ROCK2O75116 1388 aaKnown RBP11.23□□□□□ -0.61
PCTP-208ENST00000576221 TOM1O60784 492 aa11.22□□□□□ -0.61
PCTP-208ENST00000576221 LRPPRCP42704 1394 aaKnown RBP11.22□□□□□ -0.61
PCTP-208ENST00000576221 PTPRUQ92729 1446 aa11.22□□□□□ -0.61
PCTP-208ENST00000576221 CARD11Q9BXL7 1154 aa11.22□□□□□ -0.61
PCTP-208ENST00000576221 YTHDC2Q9H6S0 1430 aaKnown RBP11.21□□□□□ -0.61
PCTP-208ENST00000576221 TMEM94Q12767 1356 aa11.21□□□□□ -0.61
PCTP-208ENST00000576221 ABCC11Q96J66 1382 aa11.21□□□□□ -0.61
PCTP-208ENST00000576221 MED1Q15648 1581 aaPredicted RBP11.2□□□□□ -0.62
PCTP-208ENST00000576221 SAFB2Q14151 953 aaKnown RBP eCLIP11.2□□□□□ -0.62
PCTP-208ENST00000576221 WAPLQ7Z5K2 1190 aa11.2□□□□□ -0.62
PCTP-208ENST00000576221 SIRT1Q96EB6 747 aa11.2□□□□□ -0.62
PCTP-208ENST00000576221 PRAM1Q96QH2 718 aa11.2□□□□□ -0.62
PCTP-208ENST00000576221 XIRP1Q702N8 1843 aaKnown RBP11.2□□□□□ -0.62
PCTP-208ENST00000576221 NKTRP30414 1462 aaKnown RBP11.19□□□□□ -0.62
PCTP-208ENST00000576221 MSH6P52701 1360 aa11.19□□□□□ -0.62
PCTP-208ENST00000576221 IFT172Q9UG01 1749 aa11.19□□□□□ -0.62
PCTP-208ENST00000576221 ATF3P18847 181 aa11.19□□□□□ -0.62
PCTP-208ENST00000576221 C19orf44Q9H6X5 657 aa11.19□□□□□ -0.62
PCTP-208ENST00000576221 NRXN3Q9Y4C0 1643 aa11.19□□□□□ -0.62
PCTP-208ENST00000576221 ROBO2Q9HCK4 1378 aa11.18□□□□□ -0.62
PCTP-208ENST00000576221 HSPA1LP34931 641 aa11.18□□□□□ -0.62
PCTP-208ENST00000576221 CHD2O14647 1828 aaKnown RBP11.18□□□□□ -0.62
PCTP-208ENST00000576221 CADPS2Q86UW7 1296 aa11.17□□□□□ -0.62
PCTP-208ENST00000576221 NCOA3Q9Y6Q9 1424 aa11.17□□□□□ -0.62
PCTP-208ENST00000576221 LAMC1P11047 1609 aa11.17□□□□□ -0.62
PCTP-208ENST00000576221 NWD1Q149M9 1564 aa11.16□□□□□ -0.62
PCTP-208ENST00000576221 PTCH1Q13635 1447 aa11.16□□□□□ -0.62
PCTP-208ENST00000576221 EIF3AQ14152 1382 aaKnown RBP11.16□□□□□ -0.62
PCTP-208ENST00000576221 ZEB1P37275 1124 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms