RNA–Protein interactions for RNA: ENST00000576221.1

PCTP-208, Transcript of phosphatidylcholine transfer protein, humanhuman

TSL 5

Gene PCTP, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-208ENST00000576221 NISCHQ9Y2I1 1504 aa18.6■□□□□ 0.57
PCTP-208ENST00000576221 CCDC180Q9P1Z9 1646 aa16.37■□□□□ 0.21
PCTP-208ENST00000576221 ABCC9O60706 1549 aa16.24■□□□□ 0.19
PCTP-208ENST00000576221 DCAF8L2P0C7V8 631 aa15.73■□□□□ 0.11
PCTP-208ENST00000576221 ZCCHC6Q5VYS8 1495 aaKnown RBP15.51■□□□□ 0.07
PCTP-208ENST00000576221 RB1CC1Q8TDY2 1594 aa15.49■□□□□ 0.07
PCTP-208ENST00000576221 DNAJC5BQ9UF47 199 aa15.44■□□□□ 0.06
PCTP-208ENST00000576221 NACADO15069 1562 aa15.44■□□□□ 0.06
PCTP-208ENST00000576221 MYO15BQ96JP2 1530 aa15.37■□□□□ 0.05
PCTP-208ENST00000576221 DCAF1Q9Y4B6 1507 aa15.36■□□□□ 0.05
PCTP-208ENST00000576221 PABPN1Q86U42 306 aaKnown RBP eCLIP15.22■□□□□ 0.03
PCTP-208ENST00000576221 UNC13AQ9UPW8 1703 aa15.17■□□□□ 0.02
PCTP-208ENST00000576221 BICRAQ9NZM4 1560 aa15.07■□□□□ 0
PCTP-208ENST00000576221 SCRIBQ14160 1630 aa15.03■□□□□ -0
PCTP-208ENST00000576221 SHROOM4Q9ULL8 1493 aa14.94□□□□□ -0.02
PCTP-208ENST00000576221 DNAJC5Q9H3Z4 198 aa14.71□□□□□ -0.05
PCTP-208ENST00000576221 EIF4G1Q04637 1599 aaKnown RBP14.66□□□□□ -0.06
PCTP-208ENST00000576221 CC2D2AQ9P2K1 1620 aa14.64□□□□□ -0.07
PCTP-208ENST00000576221 CECR2Q9BXF3 1484 aa14.57□□□□□ -0.08
PCTP-208ENST00000576221 BAZ1AQ9NRL2 1556 aaPredicted RBP14.42□□□□□ -0.1
PCTP-208ENST00000576221 SMARCA4P51532 1647 aa14.36□□□□□ -0.11
PCTP-208ENST00000576221 MROH2BQ7Z745 1585 aa14.34□□□□□ -0.11
PCTP-208ENST00000576221 ATAD2BQ9ULI0 1458 aa14.31□□□□□ -0.12
PCTP-208ENST00000576221 NCAPD3P42695 1498 aa14.29□□□□□ -0.12
PCTP-208ENST00000576221 SMARCA2P51531 1590 aa14.28□□□□□ -0.12
PCTP-208ENST00000576221 RSF1Q96T23 1441 aaPredicted RBP14.27□□□□□ -0.12
PCTP-208ENST00000576221 BAZ1BQ9UIG0 1483 aaKnown RBP14.22□□□□□ -0.13
PCTP-208ENST00000576221 SUPT5HO00267 1087 aaKnown RBP14.19□□□□□ -0.14
PCTP-208ENST00000576221 PEG3Q9GZU2 1588 aa14.18□□□□□ -0.14
PCTP-208ENST00000576221 HMGXB3Q12766 1538 aa14.16□□□□□ -0.14
PCTP-208ENST00000576221 WIZO95785 1651 aa14.15□□□□□ -0.14
PCTP-208ENST00000576221 TOP2AP11388 1531 aaKnown RBP14.04□□□□□ -0.16
PCTP-208ENST00000576221 NESP48681 1621 aa14.04□□□□□ -0.16
PCTP-208ENST00000576221 ERCC6Q03468 1493 aa13.96□□□□□ -0.17
PCTP-208ENST00000576221 CCDC88BA6NC98 1476 aa13.92□□□□□ -0.18
PCTP-208ENST00000576221 CADPSQ9ULU8 1353 aa13.91□□□□□ -0.18
PCTP-208ENST00000576221 LAMC3Q9Y6N6 1575 aa13.88□□□□□ -0.19
PCTP-208ENST00000576221 CUX2O14529 1486 aa13.87□□□□□ -0.19
PCTP-208ENST00000576221 PDS5BQ9NTI5 1447 aa13.83□□□□□ -0.2
PCTP-208ENST00000576221 TRIM41Q8WV44 630 aa13.82□□□□□ -0.2
PCTP-208ENST00000576221 CFTRP13569 1480 aa13.81□□□□□ -0.2
PCTP-208ENST00000576221 KIF21AQ7Z4S6 1674 aa13.81□□□□□ -0.2
PCTP-208ENST00000576221 THOC2Q8NI27 1593 aaKnown RBP13.77□□□□□ -0.21
PCTP-208ENST00000576221 FANCD2Q9BXW9 1451 aa13.73□□□□□ -0.21
PCTP-208ENST00000576221 CEP164Q9UPV0 1460 aa13.7□□□□□ -0.22
PCTP-208ENST00000576221 MRC2Q9UBG0 1479 aa13.69□□□□□ -0.22
PCTP-208ENST00000576221 WDR62O43379 1518 aa13.64□□□□□ -0.23
PCTP-208ENST00000576221 URB2Q14146 1524 aaKnown RBP13.6□□□□□ -0.23
PCTP-208ENST00000576221 PRDM2Q13029 1718 aa13.58□□□□□ -0.24
PCTP-208ENST00000576221 ABCC8Q09428 1581 aa13.54□□□□□ -0.24
PCTP-208ENST00000576221 TOPBP1Q92547 1522 aa13.49□□□□□ -0.25
PCTP-208ENST00000576221 WRNQ14191 1432 aaPredicted RBP eCLIP13.48□□□□□ -0.25
PCTP-208ENST00000576221 DNMBPQ6XZF7 1577 aa13.47□□□□□ -0.25
PCTP-208ENST00000576221 CUX1P39880 1505 aa13.44□□□□□ -0.26
PCTP-208ENST00000576221 SOGA1O94964 1423 aa13.42□□□□□ -0.26
PCTP-208ENST00000576221 ZNF608Q9ULD9 1512 aaPredicted RBP13.41□□□□□ -0.26
PCTP-208ENST00000576221 IFT140Q96RY7 1462 aa13.41□□□□□ -0.26
PCTP-208ENST00000576221 POLA1P09884 1462 aaPredicted RBP13.4□□□□□ -0.26
PCTP-208ENST00000576221 FGD5Q6ZNL6 1462 aa13.4□□□□□ -0.26
PCTP-208ENST00000576221 RAD54L2Q9Y4B4 1467 aa13.36□□□□□ -0.27
PCTP-208ENST00000576221 SYNJ1O43426 1573 aa13.34□□□□□ -0.27
PCTP-208ENST00000576221 TOP2BQ02880 1626 aa13.34□□□□□ -0.27
PCTP-208ENST00000576221 AQRO60306 1485 aaKnown RBP eCLIP13.34□□□□□ -0.272e-6■□□□□ 9
PCTP-208ENST00000576221 TARBP1Q13395 1621 aaKnown RBP13.33□□□□□ -0.28
PCTP-208ENST00000576221 TDRD9Q8NDG6 1382 aaKnown RBP13.32□□□□□ -0.28
PCTP-208ENST00000576221 OSCARQ8IYS5 282 aa13.3□□□□□ -0.28
PCTP-208ENST00000576221 BIVM-ERCC5R4GMW8 1640 aa13.3□□□□□ -0.28
PCTP-208ENST00000576221 EIF4G3O43432 1585 aaKnown RBP13.28□□□□□ -0.28
PCTP-208ENST00000576221 CHIC1Q5VXU3 224 aa13.28□□□□□ -0.28
PCTP-208ENST00000576221 ABCA10Q8WWZ4 1543 aa13.26□□□□□ -0.29
PCTP-208ENST00000576221 GAPVD1Q14C86 1478 aa13.23□□□□□ -0.29
PCTP-208ENST00000576221 FBLN2P98095 1184 aa13.23□□□□□ -0.29
PCTP-208ENST00000576221 KIF27Q86VH2 1401 aa13.22□□□□□ -0.29
PCTP-208ENST00000576221 AEBP2Q6ZN18 517 aaPredicted RBP13.21□□□□□ -0.29
PCTP-208ENST00000576221 GRIN2BQ13224 1484 aa13.21□□□□□ -0.3
PCTP-208ENST00000576221 CHMP7Q8WUX9 453 aaPredicted RBP13.19□□□□□ -0.3
PCTP-208ENST00000576221 WDR97A6NE52 1622 aa13.18□□□□□ -0.3
PCTP-208ENST00000576221 SNAPC4Q5SXM2 1469 aa13.16□□□□□ -0.3
PCTP-208ENST00000576221 CHD1O14646 1710 aa13.16□□□□□ -0.3
PCTP-208ENST00000576221 MAGI1Q96QZ7 1491 aaPredicted RBP13.13□□□□□ -0.31
PCTP-208ENST00000576221 FAM9AQ8IZU1 332 aaPredicted RBP13.13□□□□□ -0.31
PCTP-208ENST00000576221 IGF1RP08069 1367 aa13.12□□□□□ -0.31
PCTP-208ENST00000576221 ABCA5Q8WWZ7 1642 aa13.12□□□□□ -0.31
PCTP-208ENST00000576221 ERICH3Q5RHP9 1530 aa13.1□□□□□ -0.31
PCTP-208ENST00000576221 FHAD1B1AJZ9 1412 aa13.1□□□□□ -0.31
PCTP-208ENST00000576221 PBRM1Q86U86 1689 aa13.09□□□□□ -0.31
PCTP-208ENST00000576221 CARMIL1Q5VZK9 1371 aa13.08□□□□□ -0.31
PCTP-208ENST00000576221 CSRNP3Q8WYN3 585 aa13.08□□□□□ -0.32
PCTP-208ENST00000576221 SYNJ2O15056 1496 aa13.08□□□□□ -0.32
PCTP-208ENST00000576221 RUSC2Q8N2Y8 1516 aa13.08□□□□□ -0.32
PCTP-208ENST00000576221 RIMBP3CA6NJZ7 1639 aa13.06□□□□□ -0.32
PCTP-208ENST00000576221 RIMBP3BA6NNM3 1639 aa13.06□□□□□ -0.32
PCTP-208ENST00000576221 RIMBP3Q9UFD9 1639 aa13.06□□□□□ -0.32
PCTP-208ENST00000576221 EEA1Q15075 1411 aa13.05□□□□□ -0.32
PCTP-208ENST00000576221 ARHGEF11O15085 1522 aa13.05□□□□□ -0.32
PCTP-208ENST00000576221 TRHP20396 242 aaPredicted RBP13.05□□□□□ -0.32
PCTP-208ENST00000576221 GRIN2AQ12879 1464 aa13.01□□□□□ -0.33
PCTP-208ENST00000576221 CLASP1Q7Z460 1538 aa13.01□□□□□ -0.33
PCTP-208ENST00000576221 ADAMTS12P58397 1594 aa13.01□□□□□ -0.33
PCTP-208ENST00000576221 CYB5RLQ6IPT4 315 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms