RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 TXNDC2Q86VQ3 553 aa14.76□□□□□ -0.05
UBFD1-205ENST00000566136 PKNOX2Q96KN3 472 aa14.76□□□□□ -0.05
UBFD1-205ENST00000566136 GLI2P10070 1586 aa14.76□□□□□ -0.05
UBFD1-205ENST00000566136 EPRSP07814 1512 aaKnown RBP14.76□□□□□ -0.05
UBFD1-205ENST00000566136 LOC102724159A0A0B4J2E5 919 aa14.75□□□□□ -0.05
UBFD1-205ENST00000566136 PWP2Q15269 919 aaKnown RBP14.75□□□□□ -0.05
UBFD1-205ENST00000566136 PYGBP11216 843 aa14.74□□□□□ -0.05
UBFD1-205ENST00000566136 PPRC1Q5VV67 1664 aaKnown RBP14.74□□□□□ -0.05
UBFD1-205ENST00000566136 ABCA8O94911 1581 aa14.73□□□□□ -0.05
UBFD1-205ENST00000566136 KCNA1Q09470 495 aa14.73□□□□□ -0.05
UBFD1-205ENST00000566136 MFRPQ9BY79 579 aa14.73□□□□□ -0.05
UBFD1-205ENST00000566136 REPIN1Q9BWE0 567 aaKnown RBP14.72□□□□□ -0.05
UBFD1-205ENST00000566136 SNRKQ9NRH2 765 aa14.72□□□□□ -0.05
UBFD1-205ENST00000566136 TTLL12Q14166 644 aaPredicted RBP14.71□□□□□ -0.05
UBFD1-205ENST00000566136 WDR7Q9Y4E6 1490 aa14.71□□□□□ -0.05
UBFD1-205ENST00000566136 FECHP22830 423 aa14.71□□□□□ -0.05
UBFD1-205ENST00000566136 PROCA1Q8NCQ7 364 aaPredicted RBP14.71□□□□□ -0.05
UBFD1-205ENST00000566136 SLC52A1Q9NWF4 448 aa14.7□□□□□ -0.06
UBFD1-205ENST00000566136 DIEXFQ68CQ4 756 aaKnown RBP14.7□□□□□ -0.06
UBFD1-205ENST00000566136 ANKRD13AQ8IZ07 590 aa14.7□□□□□ -0.06
UBFD1-205ENST00000566136 KCNH8Q96L42 1107 aa14.7□□□□□ -0.06
UBFD1-205ENST00000566136 MAP3K4Q9Y6R4 1608 aa14.69□□□□□ -0.06
UBFD1-205ENST00000566136 NOM1Q5C9Z4 860 aaKnown RBP14.69□□□□□ -0.06
UBFD1-205ENST00000566136 CALR3Q96L12 384 aaKnown RBP14.69□□□□□ -0.06
UBFD1-205ENST00000566136 RBM47A0AV96 593 aaKnown RBP14.68□□□□□ -0.06
UBFD1-205ENST00000566136 FBXO31Q5XUX0 539 aaPredicted RBP14.68□□□□□ -0.06
UBFD1-205ENST00000566136 PCMTD1Q96MG8 357 aaPredicted RBP14.68□□□□□ -0.06
UBFD1-205ENST00000566136 ZBTB47Q9UFB7 747 aaPredicted RBP14.68□□□□□ -0.06
UBFD1-205ENST00000566136 SPINK5Q9NQ38 1064 aaPredicted RBP14.67□□□□□ -0.06
UBFD1-205ENST00000566136 RIPOR2Q9Y4F9 1068 aa14.67□□□□□ -0.06
UBFD1-205ENST00000566136 COL17A1Q9UMD9 1497 aaPredicted RBP14.67□□□□□ -0.06
UBFD1-205ENST00000566136 ACIN1Q9UKV3 1341 aaKnown RBP14.67□□□□□ -0.06
UBFD1-205ENST00000566136 RRBP1Q9P2E9 1410 aaKnown RBP14.67□□□□□ -0.06
UBFD1-205ENST00000566136 GLMNQ92990 594 aa14.67□□□□□ -0.06
UBFD1-205ENST00000566136 LARP6Q9BRS8 491 aaKnown RBP14.67□□□□□ -0.06
UBFD1-205ENST00000566136 DRC1Q96MC2 740 aa14.66□□□□□ -0.06
UBFD1-205ENST00000566136 SAMD9Q5K651 1589 aa14.66□□□□□ -0.06
UBFD1-205ENST00000566136 ITGAEP38570 1179 aa14.66□□□□□ -0.06
UBFD1-205ENST00000566136 MICAL1Q8TDZ2 1067 aa14.66□□□□□ -0.06
UBFD1-205ENST00000566136 HIRIP3Q9BW71 556 aaPredicted RBP14.66□□□□□ -0.06
UBFD1-205ENST00000566136 GDPD2Q9HCC8 539 aa14.66□□□□□ -0.06
UBFD1-205ENST00000566136 TIAM1Q13009 1591 aa14.65□□□□□ -0.06
UBFD1-205ENST00000566136 ATP1B4Q9UN42 357 aaPredicted RBP14.65□□□□□ -0.06
UBFD1-205ENST00000566136 CCNB3Q8WWL7 1395 aa14.64□□□□□ -0.07
UBFD1-205ENST00000566136 ATP10BO94823 1461 aa14.64□□□□□ -0.07
UBFD1-205ENST00000566136 TEX14Q8IWB6 1497 aa14.64□□□□□ -0.07
UBFD1-205ENST00000566136 KDM4FA0A1W2PPD8 638 aa14.64□□□□□ -0.07
UBFD1-205ENST00000566136 RAB11FIP3O75154 756 aa14.64□□□□□ -0.07
UBFD1-205ENST00000566136 TCF3P15923 654 aa14.64□□□□□ -0.07
UBFD1-205ENST00000566136 FHOD3Q2V2M9 1422 aa14.63□□□□□ -0.07
UBFD1-205ENST00000566136 CD109Q6YHK3 1445 aa14.63□□□□□ -0.07
UBFD1-205ENST00000566136 GOPCQ9HD26 462 aa14.63□□□□□ -0.07
UBFD1-205ENST00000566136 SREK1Q8WXA9 508 aaKnown RBP14.62□□□□□ -0.07
UBFD1-205ENST00000566136 PPME1Q9Y570 386 aa14.62□□□□□ -0.07
UBFD1-205ENST00000566136 PCF11O94913 1555 aaKnown RBP14.62□□□□□ -0.07
UBFD1-205ENST00000566136 PPP1R15AO75807 674 aaPredicted RBP14.61□□□□□ -0.07
UBFD1-205ENST00000566136 VTI1AQ96AJ9 217 aa14.61□□□□□ -0.07
UBFD1-205ENST00000566136 DHX57Q6P158 1386 aaKnown RBP14.61□□□□□ -0.07
UBFD1-205ENST00000566136 ZNF16P17020 682 aaPredicted RBP14.6□□□□□ -0.07
UBFD1-205ENST00000566136 GIGYF2Q6Y7W6 1299 aaKnown RBP14.59□□□□□ -0.07
UBFD1-205ENST00000566136 RAPGEF6Q8TEU7 1601 aa14.59□□□□□ -0.07
UBFD1-205ENST00000566136 AMHR2Q16671 573 aa14.59□□□□□ -0.07
UBFD1-205ENST00000566136 OXER1Q8TDS5 423 aa14.59□□□□□ -0.07
UBFD1-205ENST00000566136 RBM27Q9P2N5 1060 aaKnown RBP14.59□□□□□ -0.07
UBFD1-205ENST00000566136 LRRC9Q6ZRR7 1453 aa14.59□□□□□ -0.07
UBFD1-205ENST00000566136 CFAP43Q8NDM7 1665 aa14.59□□□□□ -0.07
UBFD1-205ENST00000566136 MAGI3Q5TCQ9 1506 aa14.58□□□□□ -0.08
UBFD1-205ENST00000566136 ZC3H4Q9UPT8 1303 aaKnown RBP14.58□□□□□ -0.08
UBFD1-205ENST00000566136 TEX2Q8IWB9 1127 aa14.58□□□□□ -0.08
UBFD1-205ENST00000566136 MAP3K1Q13233 1512 aa14.57□□□□□ -0.08
UBFD1-205ENST00000566136 POLR3EQ9NVU0 708 aa14.57□□□□□ -0.08
UBFD1-205ENST00000566136 SUGT1Q9Y2Z0 365 aa14.56□□□□□ -0.08
UBFD1-205ENST00000566136 GPATCH3Q96I76 525 aa14.56□□□□□ -0.08
UBFD1-205ENST00000566136 NUP153P49790 1475 aaKnown RBP14.56□□□□□ -0.08
UBFD1-205ENST00000566136 PHLDB1Q86UU1 1377 aa14.56□□□□□ -0.08
UBFD1-205ENST00000566136 MSH5O43196 834 aa14.55□□□□□ -0.08
UBFD1-205ENST00000566136 TAGLNQ01995 201 aaKnown RBP14.55□□□□□ -0.08
UBFD1-205ENST00000566136 FAM50AQ14320 339 aaKnown RBP14.55□□□□□ -0.08
UBFD1-205ENST00000566136 SGIP1Q9BQI5 828 aa14.55□□□□□ -0.08
UBFD1-205ENST00000566136 CDCA8Q53HL2 280 aa14.54□□□□□ -0.08
UBFD1-205ENST00000566136 KLHL42Q9P2K6 505 aa14.54□□□□□ -0.08
UBFD1-205ENST00000566136 EFCAB5A4FU69 1503 aa14.54□□□□□ -0.08
UBFD1-205ENST00000566136 IRF6O14896 467 aa14.54□□□□□ -0.08
UBFD1-205ENST00000566136 PEX14O75381 377 aa14.54□□□□□ -0.08
UBFD1-205ENST00000566136 ADAMTS19Q8TE59 1207 aa14.53□□□□□ -0.08
UBFD1-205ENST00000566136 PBXIP1Q96AQ6 731 aa14.53□□□□□ -0.08
UBFD1-205ENST00000566136 CENPBP07199 599 aaPredicted RBP14.53□□□□□ -0.08
UBFD1-205ENST00000566136 FOXD4L6Q3SYB3 417 aaPredicted RBP14.53□□□□□ -0.08
UBFD1-205ENST00000566136 FOXD4L3Q6VB84 417 aaPredicted RBP14.53□□□□□ -0.08
UBFD1-205ENST00000566136 ADGRL1O94910 1474 aa14.51□□□□□ -0.09
UBFD1-205ENST00000566136 EXOC8Q8IYI6 725 aa14.51□□□□□ -0.09
UBFD1-205ENST00000566136 FYCO1Q9BQS8 1478 aa14.51□□□□□ -0.09
UBFD1-205ENST00000566136 DNAJC14Q6Y2X3 702 aaPredicted RBP14.51□□□□□ -0.09
UBFD1-205ENST00000566136 RASEFQ8IZ41 740 aa14.51□□□□□ -0.09
UBFD1-205ENST00000566136 GIPC2Q8TF65 315 aa14.51□□□□□ -0.09
UBFD1-205ENST00000566136 NAP1L5Q96NT1 182 aaPredicted RBP14.51□□□□□ -0.09
UBFD1-205ENST00000566136 ABCA9Q8IUA7 1624 aa14.5□□□□□ -0.09
UBFD1-205ENST00000566136 TBC1D12O60347 775 aa14.5□□□□□ -0.09
UBFD1-205ENST00000566136 CASKIN1Q8WXD9 1431 aa14.5□□□□□ -0.09
UBFD1-205ENST00000566136 CLSPNQ9HAW4 1339 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms