RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 CHIC1Q5VXU3 224 aa24.23■■□□□ 1.47
UBFD1-205ENST00000566136 AEBP2Q6ZN18 517 aaPredicted RBP23.26■■□□□ 1.31
UBFD1-205ENST00000566136 SLC24A1O60721 1099 aa23.12■■□□□ 1.29
UBFD1-205ENST00000566136 EHMT2Q96KQ7 1210 aa22.79■■□□□ 1.24
UBFD1-205ENST00000566136 PHF23Q9BUL5 403 aaPredicted RBP22.09■■□□□ 1.13
UBFD1-205ENST00000566136 PLPPR3Q6T4P5 718 aa21.99■■□□□ 1.11
UBFD1-205ENST00000566136 NISCHQ9Y2I1 1504 aa21.79■■□□□ 1.08
UBFD1-205ENST00000566136 RTN4Q9NQC3 1192 aaKnown RBP21.53■■□□□ 1.04
UBFD1-205ENST00000566136 CSRNP3Q8WYN3 585 aa21.15■□□□□ 0.98
UBFD1-205ENST00000566136 KCNA4P22459 653 aa21.14■□□□□ 0.98
UBFD1-205ENST00000566136 AMER1Q5JTC6 1135 aaPredicted RBP20.61■□□□□ 0.89
UBFD1-205ENST00000566136 PRKCSHP14314 528 aaPredicted RBP20.54■□□□□ 0.88
UBFD1-205ENST00000566136 NCBP3Q53F19 620 aaKnown RBP20.47■□□□□ 0.87
UBFD1-205ENST00000566136 DAXXQ9UER7 740 aaPredicted RBP20.26■□□□□ 0.83
UBFD1-205ENST00000566136 SLC4A1APQ9BWU0 796 aaKnown RBP20.13■□□□□ 0.81
UBFD1-205ENST00000566136 ADRA2BP18089 450 aa20.06■□□□□ 0.8
UBFD1-205ENST00000566136 TIMELESSQ9UNS1 1208 aa19.8■□□□□ 0.76
UBFD1-205ENST00000566136 ZBTB22O15209 634 aa19.71■□□□□ 0.75
UBFD1-205ENST00000566136 TAOK2Q9UL54 1235 aa19.6■□□□□ 0.73
UBFD1-205ENST00000566136 TULP1O00294 542 aaPredicted RBP19.49■□□□□ 0.71
UBFD1-205ENST00000566136 CCDC180Q9P1Z9 1646 aa19.45■□□□□ 0.7
UBFD1-205ENST00000566136 ABCC9O60706 1549 aa19.44■□□□□ 0.7
UBFD1-205ENST00000566136 TPRNQ4KMQ1 711 aa19.4■□□□□ 0.7
UBFD1-205ENST00000566136 ARXQ96QS3 562 aa19.27■□□□□ 0.68
UBFD1-205ENST00000566136 BCANQ96GW7 911 aa19.21■□□□□ 0.67
UBFD1-205ENST00000566136 PLCB2Q00722 1185 aa19.19■□□□□ 0.66
UBFD1-205ENST00000566136 HAP1P54257 671 aaPredicted RBP19.13■□□□□ 0.65
UBFD1-205ENST00000566136 NPM3O75607 178 aaKnown RBP18.99■□□□□ 0.63
UBFD1-205ENST00000566136 PPP6R1Q9UPN7 881 aa18.98■□□□□ 0.63
UBFD1-205ENST00000566136 FKBP8Q14318 412 aa18.95■□□□□ 0.62
UBFD1-205ENST00000566136 HOMEZQ8IX15 550 aa18.8■□□□□ 0.6
UBFD1-205ENST00000566136 GTF3C3Q9Y5Q9 886 aa18.76■□□□□ 0.59
UBFD1-205ENST00000566136 KLHL34Q8N239 644 aa18.72■□□□□ 0.59
UBFD1-205ENST00000566136 PODXL2Q9NZ53 605 aa18.68■□□□□ 0.58
UBFD1-205ENST00000566136 KDM2AQ9Y2K7 1162 aa18.61■□□□□ 0.57
UBFD1-205ENST00000566136 PPP4R3CPQ6ZMV5 832 aa18.6■□□□□ 0.57
UBFD1-205ENST00000566136 FBLN2P98095 1184 aa18.57■□□□□ 0.56
UBFD1-205ENST00000566136 RANGAP1P46060 587 aaPredicted RBP18.57■□□□□ 0.56
UBFD1-205ENST00000566136 APLP2Q06481 763 aa18.56■□□□□ 0.56
UBFD1-205ENST00000566136 SENP3Q9H4L4 574 aaPredicted RBP18.54■□□□□ 0.56
UBFD1-205ENST00000566136 RB1CC1Q8TDY2 1594 aa18.49■□□□□ 0.55
UBFD1-205ENST00000566136 DCAF8L2P0C7V8 631 aa18.43■□□□□ 0.54
UBFD1-205ENST00000566136 NACADO15069 1562 aa18.38■□□□□ 0.53
UBFD1-205ENST00000566136 TMEM132AQ24JP5 1023 aa18.35■□□□□ 0.53
UBFD1-205ENST00000566136 VSIG10Q8N0Z9 540 aa18.32■□□□□ 0.52
UBFD1-205ENST00000566136 FOXD4L1Q9NU39 408 aa18.25■□□□□ 0.51
UBFD1-205ENST00000566136 C14orf37Q86TY3 774 aa18.23■□□□□ 0.51
UBFD1-205ENST00000566136 SUPT5HO00267 1087 aaKnown RBP18.21■□□□□ 0.51
UBFD1-205ENST00000566136 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
UBFD1-205ENST00000566136 PABPN1Q86U42 306 aaKnown RBP eCLIP18.15■□□□□ 0.5
UBFD1-205ENST00000566136 MYO15BQ96JP2 1530 aa18.13■□□□□ 0.49
UBFD1-205ENST00000566136 NPM2Q86SE8 214 aaKnown RBP18.09■□□□□ 0.49
UBFD1-205ENST00000566136 UNC13AQ9UPW8 1703 aa18.09■□□□□ 0.49
UBFD1-205ENST00000566136 ZCCHC6Q5VYS8 1495 aaKnown RBP18.07■□□□□ 0.48
UBFD1-205ENST00000566136 TRIM26Q12899 539 aaPredicted RBP18.05■□□□□ 0.48
UBFD1-205ENST00000566136 ERICH6Q7L0X2 663 aa18.02■□□□□ 0.48
UBFD1-205ENST00000566136 PELP1Q8IZL8 1130 aaKnown RBP18■□□□□ 0.47
UBFD1-205ENST00000566136 UBTFP17480 764 aaKnown RBP17.98■□□□□ 0.47
UBFD1-205ENST00000566136 BICRAQ9NZM4 1560 aa17.97■□□□□ 0.47
UBFD1-205ENST00000566136 DCAF1Q9Y4B6 1507 aa17.96■□□□□ 0.46
UBFD1-205ENST00000566136 HRCP23327 699 aa17.83■□□□□ 0.44
UBFD1-205ENST00000566136 CFAP44Q96MT7 982 aa17.81■□□□□ 0.44
UBFD1-205ENST00000566136 SCRIBQ14160 1630 aa17.8■□□□□ 0.44
UBFD1-205ENST00000566136 PAXIP1Q6ZW49 1069 aaPredicted RBP17.79■□□□□ 0.44
UBFD1-205ENST00000566136 SHROOM4Q9ULL8 1493 aa17.78■□□□□ 0.44
UBFD1-205ENST00000566136 TSHZ2Q9NRE2 1034 aa17.75■□□□□ 0.43
UBFD1-205ENST00000566136 TTBK1Q5TCY1 1321 aaPredicted RBP17.75■□□□□ 0.43
UBFD1-205ENST00000566136 NPM1P06748 294 aaKnown RBP eCLIP17.66■□□□□ 0.42
UBFD1-205ENST00000566136 EIF5BO60841 1220 aaKnown RBP17.61■□□□□ 0.41
UBFD1-205ENST00000566136 LOC105371045A0A1W2PR82 267 aa17.6■□□□□ 0.41
UBFD1-205ENST00000566136 PKD2Q13563 968 aa17.6■□□□□ 0.41
UBFD1-205ENST00000566136 NBR1Q14596 966 aa17.54■□□□□ 0.4
UBFD1-205ENST00000566136 CC2D2AQ9P2K1 1620 aa17.53■□□□□ 0.4
UBFD1-205ENST00000566136 FOXD1Q16676 465 aa17.52■□□□□ 0.4
UBFD1-205ENST00000566136 EIF4G1Q04637 1599 aaKnown RBP17.52■□□□□ 0.39
UBFD1-205ENST00000566136 TRHP20396 242 aaPredicted RBP17.5■□□□□ 0.39
UBFD1-205ENST00000566136 CECR2Q9BXF3 1484 aa17.47■□□□□ 0.39
UBFD1-205ENST00000566136 MYT1Q01538 1121 aa17.46■□□□□ 0.39
UBFD1-205ENST00000566136 FBXO3Q9UK99 471 aa17.41■□□□□ 0.38
UBFD1-205ENST00000566136 PLEKHG5O94827 1062 aa17.41■□□□□ 0.38
UBFD1-205ENST00000566136 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.38■□□□□ 0.37
UBFD1-205ENST00000566136 IFNLR1Q8IU57 520 aaPredicted RBP17.35■□□□□ 0.37
UBFD1-205ENST00000566136 BBXQ8WY36 941 aaPredicted RBP17.29■□□□□ 0.36
UBFD1-205ENST00000566136 CNKSR2Q8WXI2 1034 aa17.27■□□□□ 0.35
UBFD1-205ENST00000566136 ARID3AQ99856 593 aa17.26■□□□□ 0.35
UBFD1-205ENST00000566136 SLC4A2P04920 1241 aa17.2■□□□□ 0.34
UBFD1-205ENST00000566136 VASPP50552 380 aaPredicted RBP17.11■□□□□ 0.33
UBFD1-205ENST00000566136 SPRYD3Q8NCJ5 442 aa17.1■□□□□ 0.33
UBFD1-205ENST00000566136 IGSF3O75054 1194 aa17.08■□□□□ 0.32
UBFD1-205ENST00000566136 BRPF1P55201 1214 aaPredicted RBP17.05■□□□□ 0.32
UBFD1-205ENST00000566136 PIAS4Q8N2W9 510 aaPredicted RBP17.01■□□□□ 0.31
UBFD1-205ENST00000566136 ATF5Q9Y2D1 282 aaPredicted RBP17.01■□□□□ 0.31
UBFD1-205ENST00000566136 NCAPD3P42695 1498 aa16.98■□□□□ 0.31
UBFD1-205ENST00000566136 ATAD2BQ9ULI0 1458 aa16.97■□□□□ 0.31
UBFD1-205ENST00000566136 SMARCA4P51532 1647 aa16.97■□□□□ 0.31
UBFD1-205ENST00000566136 DNAJC5Q9H3Z4 198 aa16.96■□□□□ 0.31
UBFD1-205ENST00000566136 RGL2O15211 777 aa16.95■□□□□ 0.3
UBFD1-205ENST00000566136 NECTIN2Q92692 538 aa16.95■□□□□ 0.3
UBFD1-205ENST00000566136 C1orf115Q9H7X2 142 aa16.95■□□□□ 0.3
UBFD1-205ENST00000566136 ATXN8OSP0DMR3 200 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms